RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 OFD1O75665 1012 aa6.69□□□□□ -1.34
TMEM39A-212ENST00000497993 LRIG2O94898 1065 aa6.69□□□□□ -1.34
TMEM39A-212ENST00000497993 HSPD1P10809 573 aaKnown RBP6.69□□□□□ -1.34
TMEM39A-212ENST00000497993 HSD3B1P14060 373 aa6.69□□□□□ -1.34
TMEM39A-212ENST00000497993 AKAP5P24588 427 aa6.69□□□□□ -1.34
TMEM39A-212ENST00000497993 POLR2BP30876 1174 aaKnown RBP6.69□□□□□ -1.34
TMEM39A-212ENST00000497993 ALDH5A1P51649 535 aaPredicted RBP6.69□□□□□ -1.34
TMEM39A-212ENST00000497993 DSG1Q02413 1049 aa6.69□□□□□ -1.34
TMEM39A-212ENST00000497993 PRKCZQ05513 592 aa6.69□□□□□ -1.34
TMEM39A-212ENST00000497993 MAP4K2Q12851 820 aa6.69□□□□□ -1.34
TMEM39A-212ENST00000497993 GRB14Q14449 540 aa6.69□□□□□ -1.34
TMEM39A-212ENST00000497993 SLC9C1Q4G0N8 1177 aa6.69□□□□□ -1.34
TMEM39A-212ENST00000497993 RRP12Q5JTH9 1297 aaKnown RBP6.69□□□□□ -1.34
TMEM39A-212ENST00000497993 KIAA1755Q5JYT7 1200 aa6.69□□□□□ -1.34
TMEM39A-212ENST00000497993 TTC22Q5TAA0 569 aa6.69□□□□□ -1.34
TMEM39A-212ENST00000497993 TDRD10Q5VZ19 366 aaKnown RBP6.69□□□□□ -1.34
TMEM39A-212ENST00000497993 NBPF11Q86T75 865 aa6.69□□□□□ -1.34
TMEM39A-212ENST00000497993 FBXL6Q8N531 539 aa6.69□□□□□ -1.34
TMEM39A-212ENST00000497993 ANKRD13CQ8N6S4 541 aa6.69□□□□□ -1.34
TMEM39A-212ENST00000497993 REPS2Q8NFH8 660 aa6.69□□□□□ -1.34
TMEM39A-212ENST00000497993 GPRC5AQ8NFJ5 357 aa6.69□□□□□ -1.34
TMEM39A-212ENST00000497993 SLC35G2Q8TBE7 412 aa6.69□□□□□ -1.34
TMEM39A-212ENST00000497993 FAM227BQ96M60 508 aa6.69□□□□□ -1.34
TMEM39A-212ENST00000497993 FGD4Q96M96 766 aa6.69□□□□□ -1.34
TMEM39A-212ENST00000497993 P2RX7Q99572 595 aaKnown RBP6.69□□□□□ -1.34
TMEM39A-212ENST00000497993 NAA15Q9BXJ9 866 aaKnown RBP6.69□□□□□ -1.34
TMEM39A-212ENST00000497993 OSBPL1AQ9BXW6 950 aa6.69□□□□□ -1.34
TMEM39A-212ENST00000497993 NAPBQ9H115 298 aa6.69□□□□□ -1.34
TMEM39A-212ENST00000497993 RSPH9Q9H1X1 276 aaPredicted RBP6.69□□□□□ -1.34
TMEM39A-212ENST00000497993 IL25Q9H293 177 aa6.69□□□□□ -1.34
TMEM39A-212ENST00000497993 EMC7Q9NPA0 242 aa6.69□□□□□ -1.34
TMEM39A-212ENST00000497993 PAK6Q9NQU5 681 aaPredicted RBP6.69□□□□□ -1.34
TMEM39A-212ENST00000497993 MTMR4Q9NYA4 1195 aa6.69□□□□□ -1.34
TMEM39A-212ENST00000497993 CLIC5Q9NZA1 410 aa6.69□□□□□ -1.34
TMEM39A-212ENST00000497993 NOL7Q9UMY1 257 aaKnown RBP6.69□□□□□ -1.34
TMEM39A-212ENST00000497993 SCN10AQ9Y5Y9 1956 aa6.69□□□□□ -1.34
TMEM39A-212ENST00000497993 MYH7BA7E2Y1 1941 aa6.68□□□□□ -1.34
TMEM39A-212ENST00000497993 RANBP2P49792 3224 aaKnown RBP6.68□□□□□ -1.34
TMEM39A-212ENST00000497993 TNPO2O14787 897 aaKnown RBP6.68□□□□□ -1.34
TMEM39A-212ENST00000497993 XPOTO43592 962 aaKnown RBP6.68□□□□□ -1.34
TMEM39A-212ENST00000497993 CLEC3AO75596 197 aa6.68□□□□□ -1.34
TMEM39A-212ENST00000497993 CRTAMO95727 393 aa6.68□□□□□ -1.34
TMEM39A-212ENST00000497993 ZBED1O96006 694 aa6.68□□□□□ -1.34
TMEM39A-212ENST00000497993 HMGCRP04035 888 aa6.68□□□□□ -1.34
TMEM39A-212ENST00000497993 GJB1P08034 283 aa6.68□□□□□ -1.34
TMEM39A-212ENST00000497993 SLC3A2P08195 630 aaKnown RBP6.68□□□□□ -1.34
TMEM39A-212ENST00000497993 EEF2P13639 858 aaKnown RBP6.68□□□□□ -1.34
TMEM39A-212ENST00000497993 TDO2P48775 406 aa6.68□□□□□ -1.34
TMEM39A-212ENST00000497993 FLT3LGP49771 235 aa6.68□□□□□ -1.34
TMEM39A-212ENST00000497993 OAZ1P54368 228 aa6.68□□□□□ -1.34
TMEM39A-212ENST00000497993 CCNA1P78396 465 aa6.68□□□□□ -1.34
TMEM39A-212ENST00000497993 NMIQ13287 307 aaPredicted RBP6.68□□□□□ -1.34
TMEM39A-212ENST00000497993 CDK5R2Q13319 367 aa6.68□□□□□ -1.34
TMEM39A-212ENST00000497993 SLBPQ14493 270 aaKnown RBP eCLIP6.68□□□□□ -1.34
TMEM39A-212ENST00000497993 COG2Q14746 738 aa6.68□□□□□ -1.34
TMEM39A-212ENST00000497993 RAB3GAP1Q15042 981 aa6.68□□□□□ -1.34
TMEM39A-212ENST00000497993 CYP27C1Q4G0S4 372 aa6.68□□□□□ -1.34
TMEM39A-212ENST00000497993 VPS53Q5VIR6 699 aa6.68□□□□□ -1.34
TMEM39A-212ENST00000497993 SLC6A19Q695T7 634 aa6.68□□□□□ -1.34
TMEM39A-212ENST00000497993 RCSD1Q6JBY9 416 aa6.68□□□□□ -1.34
TMEM39A-212ENST00000497993 LVRNQ6Q4G3 990 aa6.68□□□□□ -1.34
TMEM39A-212ENST00000497993 FAM43BQ6ZT52 329 aaPredicted RBP6.68□□□□□ -1.34
TMEM39A-212ENST00000497993 TRIM59Q8IWR1 403 aa6.68□□□□□ -1.34
TMEM39A-212ENST00000497993 MRPL41Q8IXM3 137 aaKnown RBP6.68□□□□□ -1.34
TMEM39A-212ENST00000497993 CCDC144CPQ8IYA2 1237 aa6.68□□□□□ -1.34
TMEM39A-212ENST00000497993 SLFN12Q8IYM2 578 aa6.68□□□□□ -1.34
TMEM39A-212ENST00000497993 PHACTR4Q8IZ21 702 aa6.68□□□□□ -1.34
TMEM39A-212ENST00000497993 NXPE1Q8N323 547 aa6.68□□□□□ -1.34
TMEM39A-212ENST00000497993 MFSD2AQ8NA29 543 aa6.68□□□□□ -1.34
TMEM39A-212ENST00000497993 FAM13CQ8NE31 585 aa6.68□□□□□ -1.34
TMEM39A-212ENST00000497993 COA7Q96BR5 231 aa6.68□□□□□ -1.34
TMEM39A-212ENST00000497993 SHISA4Q96DD7 197 aa6.68□□□□□ -1.34
TMEM39A-212ENST00000497993 PGBD4Q96DM1 585 aa6.68□□□□□ -1.34
TMEM39A-212ENST00000497993 MRGPRX3Q96LB0 322 aa6.68□□□□□ -1.34
TMEM39A-212ENST00000497993 CCDC138Q96M89 665 aa6.68□□□□□ -1.34
TMEM39A-212ENST00000497993 FAM193BQ96PV7 902 aaPredicted RBP6.68□□□□□ -1.34
TMEM39A-212ENST00000497993 FOXQ1Q9C009 403 aa6.68□□□□□ -1.34
TMEM39A-212ENST00000497993 RPAP3Q9H6T3 665 aaPredicted RBP6.68□□□□□ -1.34
TMEM39A-212ENST00000497993 HOXC10Q9NYD6 342 aa6.68□□□□□ -1.34
TMEM39A-212ENST00000497993 WHRNQ9P202 907 aa6.68□□□□□ -1.34
TMEM39A-212ENST00000497993 GABRQQ9UN88 632 aa6.68□□□□□ -1.34
TMEM39A-212ENST00000497993 AKT3Q9Y243 479 aa6.68□□□□□ -1.34
TMEM39A-212ENST00000497993 DNAH12Q6ZR08 3092 aa6.67□□□□□ -1.34
TMEM39A-212ENST00000497993 KLHL33A6NCF5 533 aa6.67□□□□□ -1.34
TMEM39A-212ENST00000497993 SLC15A5A6NIM6 579 aa6.67□□□□□ -1.34
TMEM39A-212ENST00000497993 PRR19A6NJB7 356 aa6.67□□□□□ -1.34
TMEM39A-212ENST00000497993 TPP1O14773 563 aa6.67□□□□□ -1.34
TMEM39A-212ENST00000497993 RGS13O14921 159 aa6.67□□□□□ -1.34
TMEM39A-212ENST00000497993 FIBPO43427 364 aa6.67□□□□□ -1.34
TMEM39A-212ENST00000497993 CBFA2T2O43439 604 aa6.67□□□□□ -1.34
TMEM39A-212ENST00000497993 AP1G1O43747 822 aa6.67□□□□□ -1.34
TMEM39A-212ENST00000497993 STRNO43815 780 aa6.67□□□□□ -1.34
TMEM39A-212ENST00000497993 TTLL1O95922 423 aa6.67□□□□□ -1.34
TMEM39A-212ENST00000497993 HRGP04196 525 aa6.67□□□□□ -1.34
TMEM39A-212ENST00000497993 SNHG28P0DPA3 235 aa6.67□□□□□ -1.34
TMEM39A-212ENST00000497993 GRK6P43250 576 aa6.67□□□□□ -1.34
TMEM39A-212ENST00000497993 KPNA1P52294 538 aaPredicted RBP6.67□□□□□ -1.34
TMEM39A-212ENST00000497993 CCDC96Q2M329 555 aa6.67□□□□□ -1.34
TMEM39A-212ENST00000497993 ERICH6BQ5W0A0 696 aa6.67□□□□□ -1.34
TMEM39A-212ENST00000497993 OLFML2BQ68BL8 750 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms