RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 PROZP22891 400 aa12.86□□□□□ -0.35
NUDCD3-211ENST00000497978 TKTP29401 623 aaKnown RBP12.86□□□□□ -0.35
NUDCD3-211ENST00000497978 RPL9P32969 192 aaKnown RBP12.86□□□□□ -0.35
NUDCD3-211ENST00000497978 MATR3P43243 847 aaKnown RBP eCLIP12.86□□□□□ -0.35
NUDCD3-211ENST00000497978 BRCC3P46736 316 aa12.86□□□□□ -0.35
NUDCD3-211ENST00000497978 HTR4Q13639 388 aa12.86□□□□□ -0.35
NUDCD3-211ENST00000497978 NOLC1Q14978 699 aaKnown RBP eCLIP12.86□□□□□ -0.35
NUDCD3-211ENST00000497978 LARP1BQ659C4 914 aaKnown RBP12.86□□□□□ -0.35
NUDCD3-211ENST00000497978 CALML4Q96GE6 196 aa12.86□□□□□ -0.35
NUDCD3-211ENST00000497978 AK8Q96MA6 479 aa12.86□□□□□ -0.35
NUDCD3-211ENST00000497978 PNMA5Q96PV4 448 aa12.86□□□□□ -0.35
NUDCD3-211ENST00000497978 CNTN3Q9P232 1028 aa12.86□□□□□ -0.35
NUDCD3-211ENST00000497978 LARSQ9P2J5 1176 aaKnown RBP12.86□□□□□ -0.35
NUDCD3-211ENST00000497978 ANKFY1Q9P2R3 1169 aa12.86□□□□□ -0.35
NUDCD3-211ENST00000497978 CDH7Q9ULB5 785 aa12.86□□□□□ -0.35
NUDCD3-211ENST00000497978 NUB1Q9Y5A7 615 aa12.86□□□□□ -0.35
NUDCD3-211ENST00000497978 NUMBLQ9Y6R0 609 aa12.86□□□□□ -0.35
NUDCD3-211ENST00000497978 MYH11P35749 1972 aa12.86□□□□□ -0.35
NUDCD3-211ENST00000497978 H7C4K7 107 aa12.85□□□□□ -0.35
NUDCD3-211ENST00000497978 I3L4J1 428 aa12.85□□□□□ -0.35
NUDCD3-211ENST00000497978 SYN3O14994 580 aa12.85□□□□□ -0.35
NUDCD3-211ENST00000497978 CLDN3O15551 220 aa12.85□□□□□ -0.35
NUDCD3-211ENST00000497978 ATMINO43313 823 aaPredicted RBP12.85□□□□□ -0.35
NUDCD3-211ENST00000497978 BMP15O95972 392 aa12.85□□□□□ -0.35
NUDCD3-211ENST00000497978 MAPTP10636 758 aaKnown RBP12.85□□□□□ -0.35
NUDCD3-211ENST00000497978 IGFBP6P24592 240 aaPredicted RBP12.85□□□□□ -0.35
NUDCD3-211ENST00000497978 ELF1P32519 619 aa12.85□□□□□ -0.35
NUDCD3-211ENST00000497978 UBA7P41226 1012 aa12.85□□□□□ -0.35
NUDCD3-211ENST00000497978 SLC12A3P55017 1021 aa12.85□□□□□ -0.35
NUDCD3-211ENST00000497978 NTHL1P78549 312 aa12.85□□□□□ -0.35
NUDCD3-211ENST00000497978 SOX4Q06945 474 aaPredicted RBP12.85□□□□□ -0.35
NUDCD3-211ENST00000497978 CD300LGQ6UXG3 332 aa12.85□□□□□ -0.35
NUDCD3-211ENST00000497978 ZPBP2Q6X784 338 aa12.85□□□□□ -0.35
NUDCD3-211ENST00000497978 MTSS1LQ765P7 747 aa12.85□□□□□ -0.35
NUDCD3-211ENST00000497978 C3orf58Q8NDZ4 430 aa12.85□□□□□ -0.35
NUDCD3-211ENST00000497978 TMEM161BQ8NDZ6 487 aa12.85□□□□□ -0.35
NUDCD3-211ENST00000497978 BICD1Q96G01 975 aa12.85□□□□□ -0.35
NUDCD3-211ENST00000497978 ZBTB45Q96K62 511 aaPredicted RBP12.85□□□□□ -0.35
NUDCD3-211ENST00000497978 ZMAT2Q96NC0 199 aaKnown RBP12.85□□□□□ -0.35
NUDCD3-211ENST00000497978 CA14Q9ULX7 337 aa12.85□□□□□ -0.35
NUDCD3-211ENST00000497978 CITO14578 2027 aa12.84□□□□□ -0.35
NUDCD3-211ENST00000497978 KRBA1A5PL33 1030 aa12.84□□□□□ -0.35
NUDCD3-211ENST00000497978 PROB1E7EW31 1015 aa12.84□□□□□ -0.35
NUDCD3-211ENST00000497978 ABLIM1O14639 778 aa12.84□□□□□ -0.35
NUDCD3-211ENST00000497978 PI15O43692 258 aa12.84□□□□□ -0.35
NUDCD3-211ENST00000497978 CD2BP2O95400 341 aaKnown RBP12.84□□□□□ -0.35
NUDCD3-211ENST00000497978 SCP2P22307 547 aa12.84□□□□□ -0.35
NUDCD3-211ENST00000497978 TMEM119Q4V9L6 283 aa12.84□□□□□ -0.35
NUDCD3-211ENST00000497978 PABPC1LQ4VXU2 614 aaKnown RBP12.84□□□□□ -0.35
NUDCD3-211ENST00000497978 VARS2Q5ST30 1063 aaKnown RBP12.84□□□□□ -0.35
NUDCD3-211ENST00000497978 BRAPQ7Z569 592 aa12.84□□□□□ -0.35
NUDCD3-211ENST00000497978 CCDC105Q8IYK2 499 aa12.84□□□□□ -0.35
NUDCD3-211ENST00000497978 DTWD2Q8NBA8 298 aa12.84□□□□□ -0.35
NUDCD3-211ENST00000497978 RASSF8Q8NHQ8 419 aa12.84□□□□□ -0.35
NUDCD3-211ENST00000497978 ZNF461Q8TAF7 563 aa12.84□□□□□ -0.35
NUDCD3-211ENST00000497978 GPR152Q8TDT2 470 aa12.84□□□□□ -0.35
NUDCD3-211ENST00000497978 FGF13Q92913 245 aa12.84□□□□□ -0.35
NUDCD3-211ENST00000497978 SLC2A4RGQ9NR83 387 aa12.84□□□□□ -0.35
NUDCD3-211ENST00000497978 KCNH3Q9ULD8 1083 aa12.84□□□□□ -0.35
NUDCD3-211ENST00000497978 ODF2LQ9ULJ1 636 aa12.84□□□□□ -0.35
NUDCD3-211ENST00000497978 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.84□□□□□ -0.35
NUDCD3-211ENST00000497978 WDFY4Q6ZS81 3184 aa12.84□□□□□ -0.35
NUDCD3-211ENST00000497978 NPHP3-ACAD11A0A0J9YXS1 232 aa12.83□□□□□ -0.36
NUDCD3-211ENST00000497978 PRRG1O14668 218 aa12.83□□□□□ -0.36
NUDCD3-211ENST00000497978 LRG1P02750 347 aa12.83□□□□□ -0.36
NUDCD3-211ENST00000497978 KRT18P05783 430 aaKnown RBP12.83□□□□□ -0.36
NUDCD3-211ENST00000497978 CLTAP09496 248 aa12.83□□□□□ -0.36
NUDCD3-211ENST00000497978 MARCKSP29966 332 aaPredicted RBP12.83□□□□□ -0.36
NUDCD3-211ENST00000497978 MCM4P33991 863 aa12.83□□□□□ -0.36
NUDCD3-211ENST00000497978 NBL1P41271 181 aa12.83□□□□□ -0.36
NUDCD3-211ENST00000497978 LIG4P49917 911 aa12.83□□□□□ -0.36
NUDCD3-211ENST00000497978 ARPP19P56211 112 aa12.83□□□□□ -0.36
NUDCD3-211ENST00000497978 ROR1Q01973 937 aa12.83□□□□□ -0.36
NUDCD3-211ENST00000497978 MCL1Q07820 350 aa12.83□□□□□ -0.36
NUDCD3-211ENST00000497978 KYAT1Q16773 422 aa12.83□□□□□ -0.36
NUDCD3-211ENST00000497978 SLC10A6Q3KNW5 377 aa12.83□□□□□ -0.36
NUDCD3-211ENST00000497978 SLC8B1Q6J4K2 584 aa12.83□□□□□ -0.36
NUDCD3-211ENST00000497978 PARM1Q6UWI2 310 aa12.83□□□□□ -0.36
NUDCD3-211ENST00000497978 RSPO2Q6UXX9 243 aaPredicted RBP12.83□□□□□ -0.36
NUDCD3-211ENST00000497978 HAUS6Q7Z4H7 955 aa12.83□□□□□ -0.36
NUDCD3-211ENST00000497978 GPBP1Q86WP2 473 aa12.83□□□□□ -0.36
NUDCD3-211ENST00000497978 APPL2Q8NEU8 664 aa12.83□□□□□ -0.36
NUDCD3-211ENST00000497978 C18orf25Q96B23 403 aaPredicted RBP12.83□□□□□ -0.36
NUDCD3-211ENST00000497978 SHDQ96IW2 340 aa12.83□□□□□ -0.36
NUDCD3-211ENST00000497978 TBC1D17Q9HA65 648 aa12.83□□□□□ -0.36
NUDCD3-211ENST00000497978 PLEKHA5Q9HAU0 1116 aa12.83□□□□□ -0.36
NUDCD3-211ENST00000497978 ARHGEF3Q9NR81 526 aa12.83□□□□□ -0.36
NUDCD3-211ENST00000497978 HCFC1R1Q9NWW0 138 aa12.83□□□□□ -0.36
NUDCD3-211ENST00000497978 DNMT3BQ9UBC3 853 aaKnown RBP12.83□□□□□ -0.36
NUDCD3-211ENST00000497978 DOCK6Q96HP0 2047 aa12.83□□□□□ -0.36
NUDCD3-211ENST00000497978 XPOTO43592 962 aaKnown RBP12.82□□□□□ -0.36
NUDCD3-211ENST00000497978 ABLIM3O94929 683 aa12.82□□□□□ -0.36
NUDCD3-211ENST00000497978 FAM13AO94988 1023 aa12.82□□□□□ -0.36
NUDCD3-211ENST00000497978 ATF2P15336 505 aa12.82□□□□□ -0.36
NUDCD3-211ENST00000497978 PTPN2P17706 415 aa12.82□□□□□ -0.36
NUDCD3-211ENST00000497978 ABCD1P33897 745 aa12.82□□□□□ -0.36
NUDCD3-211ENST00000497978 LONP1P36776 959 aaKnown RBP12.82□□□□□ -0.36
NUDCD3-211ENST00000497978 NCKAP1LP55160 1127 aa12.82□□□□□ -0.36
NUDCD3-211ENST00000497978 DHX8Q14562 1220 aaKnown RBP12.82□□□□□ -0.36
NUDCD3-211ENST00000497978 ANGPT1Q15389 498 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms