RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 SLC38A3Q99624 504 aa4.35□□□□□ -1.71
EXOSC3-208ENST00000496910 CENPOQ9BU64 300 aa4.35□□□□□ -1.71
EXOSC3-208ENST00000496910 PITHD1Q9GZP4 211 aaPredicted RBP4.35□□□□□ -1.71
EXOSC3-208ENST00000496910 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.35□□□□□ -1.71
EXOSC3-208ENST00000496910 OR10A5Q9H207 317 aa4.35□□□□□ -1.71
EXOSC3-208ENST00000496910 POFUT1Q9H488 388 aa4.35□□□□□ -1.71
EXOSC3-208ENST00000496910 C1orf112Q9NSG2 853 aa4.35□□□□□ -1.71
EXOSC3-208ENST00000496910 KCNG1Q9UIX4 513 aa4.35□□□□□ -1.71
EXOSC3-208ENST00000496910 GPR52Q9Y2T5 361 aa4.35□□□□□ -1.71
EXOSC3-208ENST00000496910 MST1RQ04912 1400 aa4.35□□□□□ -1.71
EXOSC3-208ENST00000496910 GOLGA3Q08378 1498 aa4.35□□□□□ -1.71
EXOSC3-208ENST00000496910 ANKRD17O75179 2603 aaKnown RBP4.35□□□□□ -1.71
EXOSC3-208ENST00000496910 LRRC37A3O60309 1634 aa4.35□□□□□ -1.71
EXOSC3-208ENST00000496910 ADAMTS20P59510 1910 aa4.34□□□□□ -1.71
EXOSC3-208ENST00000496910 DNAH12Q6ZR08 3092 aa4.34□□□□□ -1.71
EXOSC3-208ENST00000496910 hCG_1642624A0A1W2PR95 340 aa4.34□□□□□ -1.71
EXOSC3-208ENST00000496910 UBA6A0AVT1 1052 aaPredicted RBP4.34□□□□□ -1.71
EXOSC3-208ENST00000496910 TPP1O14773 563 aa4.34□□□□□ -1.71
EXOSC3-208ENST00000496910 ULK1O75385 1050 aa4.34□□□□□ -1.71
EXOSC3-208ENST00000496910 IL33O95760 270 aa4.34□□□□□ -1.71
EXOSC3-208ENST00000496910 CFPP27918 469 aa4.34□□□□□ -1.71
EXOSC3-208ENST00000496910 RXRGP48443 463 aa4.34□□□□□ -1.71
EXOSC3-208ENST00000496910 CCT5P48643 541 aa4.34□□□□□ -1.71
EXOSC3-208ENST00000496910 AFF3P51826 1226 aaKnown RBP4.34□□□□□ -1.71
EXOSC3-208ENST00000496910 EIF5P55010 431 aaKnown RBP4.34□□□□□ -1.71
EXOSC3-208ENST00000496910 MANFP55145 182 aaKnown RBP4.34□□□□□ -1.71
EXOSC3-208ENST00000496910 SLC6A3Q01959 620 aa4.34□□□□□ -1.71
EXOSC3-208ENST00000496910 TBX2Q13207 712 aaPredicted RBP4.34□□□□□ -1.71
EXOSC3-208ENST00000496910 ZNF267Q14586 743 aaPredicted RBP4.34□□□□□ -1.71
EXOSC3-208ENST00000496910 ZNF385BQ569K4 471 aa4.34□□□□□ -1.71
EXOSC3-208ENST00000496910 TTC38Q5R3I4 469 aa4.34□□□□□ -1.71
EXOSC3-208ENST00000496910 TMEM200BQ69YZ2 307 aa4.34□□□□□ -1.71
EXOSC3-208ENST00000496910 PNMA8AQ86V59 439 aaPredicted RBP4.34□□□□□ -1.71
EXOSC3-208ENST00000496910 C11orf74Q86VG3 221 aa4.34□□□□□ -1.71
EXOSC3-208ENST00000496910 NME9Q86XW9 330 aa4.34□□□□□ -1.71
EXOSC3-208ENST00000496910 LINC01356Q8N9X3 169 aa4.34□□□□□ -1.71
EXOSC3-208ENST00000496910 NUDT10Q8NFP7 164 aa4.34□□□□□ -1.71
EXOSC3-208ENST00000496910 LMBR1Q8WVP7 490 aa4.34□□□□□ -1.71
EXOSC3-208ENST00000496910 ERCC4Q92889 916 aaPredicted RBP4.34□□□□□ -1.71
EXOSC3-208ENST00000496910 PGBD4Q96DM1 585 aa4.34□□□□□ -1.71
EXOSC3-208ENST00000496910 NUDT11Q96G61 164 aa4.34□□□□□ -1.71
EXOSC3-208ENST00000496910 TBATAQ96M53 351 aa4.34□□□□□ -1.71
EXOSC3-208ENST00000496910 CLIC6Q96NY7 704 aa4.34□□□□□ -1.71
EXOSC3-208ENST00000496910 WRNIP1Q96S55 665 aa4.34□□□□□ -1.71
EXOSC3-208ENST00000496910 NUP88Q99567 741 aaPredicted RBP4.34□□□□□ -1.71
EXOSC3-208ENST00000496910 HNRNPABQ99729 332 aaKnown RBP4.34□□□□□ -1.71
EXOSC3-208ENST00000496910 SPATA25Q9BR10 227 aa4.34□□□□□ -1.71
EXOSC3-208ENST00000496910 MYL10Q9BUA6 226 aa4.34□□□□□ -1.71
EXOSC3-208ENST00000496910 OSBPL5Q9H0X9 879 aaPredicted RBP4.34□□□□□ -1.71
EXOSC3-208ENST00000496910 PRO3102Q9H379 93 aa4.34□□□□□ -1.71
EXOSC3-208ENST00000496910 USP36Q9P275 1121 aaKnown RBP4.34□□□□□ -1.71
EXOSC3-208ENST00000496910 MSRAQ9UJ68 235 aa4.34□□□□□ -1.71
EXOSC3-208ENST00000496910 SLIT1O75093 1534 aa4.34□□□□□ -1.71
EXOSC3-208ENST00000496910 SBF2Q86WG5 1849 aa4.33□□□□□ -1.72
EXOSC3-208ENST00000496910 FMN2Q9NZ56 1722 aa4.33□□□□□ -1.72
EXOSC3-208ENST00000496910 UGGT2Q9NYU1 1516 aa4.33□□□□□ -1.72
EXOSC3-208ENST00000496910 AP1G1O43747 822 aa4.33□□□□□ -1.72
EXOSC3-208ENST00000496910 KDM1AO60341 852 aa4.33□□□□□ -1.72
EXOSC3-208ENST00000496910 TLR5O60602 858 aa4.33□□□□□ -1.72
EXOSC3-208ENST00000496910 CTNND1O60716 968 aaKnown RBP4.33□□□□□ -1.72
EXOSC3-208ENST00000496910 PRPF6O94906 941 aaKnown RBP4.33□□□□□ -1.72
EXOSC3-208ENST00000496910 PFKMP08237 780 aa4.33□□□□□ -1.72
EXOSC3-208ENST00000496910 CELA3BP08861 270 aa4.33□□□□□ -1.72
EXOSC3-208ENST00000496910 CALRP27797 417 aaKnown RBP4.33□□□□□ -1.72
EXOSC3-208ENST00000496910 CHKAP35790 457 aa4.33□□□□□ -1.72
EXOSC3-208ENST00000496910 TXKP42681 527 aa4.33□□□□□ -1.72
EXOSC3-208ENST00000496910 MAPK9P45984 424 aa4.33□□□□□ -1.72
EXOSC3-208ENST00000496910 CD83Q01151 205 aa4.33□□□□□ -1.72
EXOSC3-208ENST00000496910 TOP3AQ13472 1001 aaPredicted RBP4.33□□□□□ -1.72
EXOSC3-208ENST00000496910 RRP12Q5JTH9 1297 aaKnown RBP4.33□□□□□ -1.72
EXOSC3-208ENST00000496910 IFIT1BQ5T764 474 aaKnown RBP4.33□□□□□ -1.72
EXOSC3-208ENST00000496910 SLFN12LQ6IEE8 588 aa4.33□□□□□ -1.72
EXOSC3-208ENST00000496910 KIAA1841Q6NSI8 718 aa4.33□□□□□ -1.72
EXOSC3-208ENST00000496910 MZT2BQ6NZ67 158 aa4.33□□□□□ -1.72
EXOSC3-208ENST00000496910 PGM2L1Q6PCE3 622 aa4.33□□□□□ -1.72
EXOSC3-208ENST00000496910 RSRC2Q7L4I2 434 aaKnown RBP4.33□□□□□ -1.72
EXOSC3-208ENST00000496910 CXXC5Q7LFL8 322 aaKnown RBP4.33□□□□□ -1.72
EXOSC3-208ENST00000496910 CATIPQ7Z7H3 387 aa4.33□□□□□ -1.72
EXOSC3-208ENST00000496910 PHYKPLQ8IUZ5 450 aa4.33□□□□□ -1.72
EXOSC3-208ENST00000496910 CARFQ8N187 725 aa4.33□□□□□ -1.72
EXOSC3-208ENST00000496910 AHCYL2Q96HN2 611 aaKnown RBP4.33□□□□□ -1.72
EXOSC3-208ENST00000496910 KRTAP9-2Q9BYQ4 174 aa4.33□□□□□ -1.72
EXOSC3-208ENST00000496910 WDR12Q9GZL7 423 aaKnown RBP4.33□□□□□ -1.72
EXOSC3-208ENST00000496910 RIC8AQ9NPQ8 531 aa4.33□□□□□ -1.72
EXOSC3-208ENST00000496910 DENND2AQ9ULE3 1009 aa4.33□□□□□ -1.72
EXOSC3-208ENST00000496910 KIAA0100Q14667 2235 aaKnown RBP4.32□□□□□ -1.72
EXOSC3-208ENST00000496910 RPTORQ8N122 1335 aa4.32□□□□□ -1.72
EXOSC3-208ENST00000496910 PASKQ96RG2 1323 aa4.32□□□□□ -1.72
EXOSC3-208ENST00000496910 A0A0A6YYK5 440 aaPredicted RBP4.32□□□□□ -1.72
EXOSC3-208ENST00000496910 A0A1B0GVC2 190 aa4.32□□□□□ -1.72
EXOSC3-208ENST00000496910 A0A1W2PRQ8 180 aa4.32□□□□□ -1.72
EXOSC3-208ENST00000496910 PRSS38A1L453 326 aa4.32□□□□□ -1.72
EXOSC3-208ENST00000496910 M0R3H8 397 aa4.32□□□□□ -1.72
EXOSC3-208ENST00000496910 RFXAPO00287 272 aa4.32□□□□□ -1.72
EXOSC3-208ENST00000496910 DDX3XO00571 662 aaKnown RBP eCLIP4.32□□□□□ -1.72
EXOSC3-208ENST00000496910 ORC4O43929 436 aa4.32□□□□□ -1.72
EXOSC3-208ENST00000496910 ZBED1O96006 694 aa4.32□□□□□ -1.72
EXOSC3-208ENST00000496910 TGFB3P10600 412 aa4.32□□□□□ -1.72
EXOSC3-208ENST00000496910 IL13P35225 146 aa4.32□□□□□ -1.72
EXOSC3-208ENST00000496910 IL6STP40189 918 aaPredicted RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms