RNA–Protein interactions for RNA: ENST00000496818.2

CACNA1C-229, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-229ENST00000496818 RNF169Q8NCN4 708 aa6.45□□□□□ -1.38
CACNA1C-229ENST00000496818 CCDC148Q8NFR7 591 aa6.45□□□□□ -1.38
CACNA1C-229ENST00000496818 VN1R2Q8NFZ6 395 aa6.45□□□□□ -1.38
CACNA1C-229ENST00000496818 TRIM44Q96DX7 344 aaPredicted RBP6.45□□□□□ -1.38
CACNA1C-229ENST00000496818 ASIC4Q96FT7 647 aa6.45□□□□□ -1.38
CACNA1C-229ENST00000496818 TMEM169Q96HH4 297 aa6.45□□□□□ -1.38
CACNA1C-229ENST00000496818 APOL5Q9BWW9 433 aa6.45□□□□□ -1.38
CACNA1C-229ENST00000496818 LRRC2Q9BYS8 371 aa6.45□□□□□ -1.38
CACNA1C-229ENST00000496818 PDCL3Q9H2J4 239 aa6.45□□□□□ -1.38
CACNA1C-229ENST00000496818 CCSER2Q9H7U1 834 aa6.45□□□□□ -1.38
CACNA1C-229ENST00000496818 TBC1D22BQ9NU19 505 aa6.45□□□□□ -1.38
CACNA1C-229ENST00000496818 FAM86C1Q9NVL1 165 aa6.45□□□□□ -1.38
CACNA1C-229ENST00000496818 BARHL2Q9NY43 387 aa6.45□□□□□ -1.38
CACNA1C-229ENST00000496818 DACT1Q9NYF0 836 aa6.45□□□□□ -1.38
CACNA1C-229ENST00000496818 SPG21Q9NZD8 308 aa6.45□□□□□ -1.38
CACNA1C-229ENST00000496818 NAP1L2Q9ULW6 460 aaPredicted RBP6.45□□□□□ -1.38
CACNA1C-229ENST00000496818 TLR6Q9Y2C9 796 aa6.45□□□□□ -1.38
CACNA1C-229ENST00000496818 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.44□□□□□ -1.38
CACNA1C-229ENST00000496818 WDR64B1ANS9 1081 aa6.44□□□□□ -1.38
CACNA1C-229ENST00000496818 MEIS1O00470 390 aa6.44□□□□□ -1.38
CACNA1C-229ENST00000496818 ENC1O14682 589 aa6.44□□□□□ -1.38
CACNA1C-229ENST00000496818 CCNE2O96020 404 aa6.44□□□□□ -1.38
CACNA1C-229ENST00000496818 ESRRAP11474 423 aaPredicted RBP6.44□□□□□ -1.38
CACNA1C-229ENST00000496818 SFPQP23246 707 aaKnown RBP eCLIP6.44□□□□□ -1.38
CACNA1C-229ENST00000496818 GNA11P29992 359 aa6.44□□□□□ -1.38
CACNA1C-229ENST00000496818 AVPR2P30518 371 aa6.44□□□□□ -1.38
CACNA1C-229ENST00000496818 MTHFRP42898 656 aa6.44□□□□□ -1.38
CACNA1C-229ENST00000496818 ALDH7A1P49419 539 aaKnown RBP6.44□□□□□ -1.38
CACNA1C-229ENST00000496818 MCM2P49736 904 aa6.44□□□□□ -1.38
CACNA1C-229ENST00000496818 METAP2P50579 478 aaKnown RBP eCLIP6.44□□□□□ -1.38
CACNA1C-229ENST00000496818 CLCN3P51790 818 aa6.44□□□□□ -1.38
CACNA1C-229ENST00000496818 ANAPC15P60006 121 aa6.44□□□□□ -1.38
CACNA1C-229ENST00000496818 ERVFC1P60507 584 aa6.44□□□□□ -1.38
CACNA1C-229ENST00000496818 RBM10P98175 930 aaKnown RBP6.44□□□□□ -1.38
CACNA1C-229ENST00000496818 AKAP17AQ02040 695 aaKnown RBP6.44□□□□□ -1.38
CACNA1C-229ENST00000496818 PRKCEQ02156 737 aa6.44□□□□□ -1.38
CACNA1C-229ENST00000496818 CCDC173Q0VFZ6 552 aa6.44□□□□□ -1.38
CACNA1C-229ENST00000496818 KRT32Q14532 448 aa6.44□□□□□ -1.38
CACNA1C-229ENST00000496818 SWSAP1Q6NVH7 229 aa6.44□□□□□ -1.38
CACNA1C-229ENST00000496818 KCNT2Q6UVM3 1135 aa6.44□□□□□ -1.38
CACNA1C-229ENST00000496818 ABHD15Q6UXT9 468 aa6.44□□□□□ -1.38
CACNA1C-229ENST00000496818 TRMT1LQ7Z2T5 733 aaKnown RBP6.44□□□□□ -1.38
CACNA1C-229ENST00000496818 DMRTC2Q8IXT2 367 aaPredicted RBP6.44□□□□□ -1.38
CACNA1C-229ENST00000496818 KIAA0319LQ8IZA0 1049 aa6.44□□□□□ -1.38
CACNA1C-229ENST00000496818 KREMEN2Q8NCW0 462 aa6.44□□□□□ -1.38
CACNA1C-229ENST00000496818 CYP2W1Q8TAV3 490 aa6.44□□□□□ -1.38
CACNA1C-229ENST00000496818 BICD2Q8TD16 824 aa6.44□□□□□ -1.38
CACNA1C-229ENST00000496818 PKNOX2Q96KN3 472 aa6.44□□□□□ -1.38
CACNA1C-229ENST00000496818 CEP44Q9C0F1 390 aa6.44□□□□□ -1.38
CACNA1C-229ENST00000496818 LSG1Q9H089 658 aaKnown RBP6.44□□□□□ -1.38
CACNA1C-229ENST00000496818 ADAM7Q9H2U9 754 aa6.44□□□□□ -1.38
CACNA1C-229ENST00000496818 CWH43Q9H720 699 aa6.44□□□□□ -1.38
CACNA1C-229ENST00000496818 ZFYVE1Q9HBF4 777 aa6.44□□□□□ -1.38
CACNA1C-229ENST00000496818 CAPN10Q9HC96 672 aa6.44□□□□□ -1.38
CACNA1C-229ENST00000496818 C6orf50Q9HD87 102 aa6.44□□□□□ -1.38
CACNA1C-229ENST00000496818 STK39Q9UEW8 545 aa6.44□□□□□ -1.38
CACNA1C-229ENST00000496818 DBR1Q9UK59 544 aaKnown RBP6.44□□□□□ -1.38
CACNA1C-229ENST00000496818 PPM1HQ9ULR3 514 aa6.44□□□□□ -1.38
CACNA1C-229ENST00000496818 PPME1Q9Y570 386 aa6.44□□□□□ -1.38
CACNA1C-229ENST00000496818 PCDHA10Q9Y5I2 948 aa6.44□□□□□ -1.38
CACNA1C-229ENST00000496818 HCFC2Q9Y5Z7 792 aa6.44□□□□□ -1.38
CACNA1C-229ENST00000496818 KLF18A0A0U1RQI7 1052 aa6.43□□□□□ -1.38
CACNA1C-229ENST00000496818 ESYT2A0FGR8 921 aa6.43□□□□□ -1.38
CACNA1C-229ENST00000496818 HIDE1A8MVS5 230 aa6.43□□□□□ -1.38
CACNA1C-229ENST00000496818 C2CD4DB7Z1M9 353 aa6.43□□□□□ -1.38
CACNA1C-229ENST00000496818 FAM86B1E9PN63 330 aa6.43□□□□□ -1.38
CACNA1C-229ENST00000496818 GAS7O60861 476 aa6.43□□□□□ -1.38
CACNA1C-229ENST00000496818 ZC3H11AO75152 810 aaKnown RBP eCLIP6.43□□□□□ -1.38
CACNA1C-229ENST00000496818 GPR32O75388 356 aa6.43□□□□□ -1.38
CACNA1C-229ENST00000496818 HMGB1P09429 215 aaKnown RBP6.43□□□□□ -1.38
CACNA1C-229ENST00000496818 FAM86B2P0C5J1 330 aa6.43□□□□□ -1.38
CACNA1C-229ENST00000496818 XRCC6P12956 609 aaKnown RBP eCLIP6.43□□□□□ -1.38
CACNA1C-229ENST00000496818 SFNP31947 248 aa6.43□□□□□ -1.38
CACNA1C-229ENST00000496818 PBX3P40426 434 aa6.43□□□□□ -1.38
CACNA1C-229ENST00000496818 RAB27AP51159 221 aa6.43□□□□□ -1.38
CACNA1C-229ENST00000496818 GPC3P51654 580 aa6.43□□□□□ -1.38
CACNA1C-229ENST00000496818 JAK3P52333 1124 aa6.43□□□□□ -1.38
CACNA1C-229ENST00000496818 NLRP11P59045 1033 aaKnown RBP6.43□□□□□ -1.38
CACNA1C-229ENST00000496818 GSTM4Q03013 218 aa6.43□□□□□ -1.38
CACNA1C-229ENST00000496818 KCNC3Q14003 757 aa6.43□□□□□ -1.38
CACNA1C-229ENST00000496818 PRR16Q569H4 304 aa6.43□□□□□ -1.38
CACNA1C-229ENST00000496818 JAKMIP3Q5VZ66 844 aa6.43□□□□□ -1.38
CACNA1C-229ENST00000496818 KIAA1841Q6NSI8 718 aa6.43□□□□□ -1.38
CACNA1C-229ENST00000496818 EFCAB12Q6NXP0 572 aa6.43□□□□□ -1.38
CACNA1C-229ENST00000496818 SYCE2Q6PIF2 218 aa6.43□□□□□ -1.38
CACNA1C-229ENST00000496818 GLB1LQ6UWU2 654 aa6.43□□□□□ -1.38
CACNA1C-229ENST00000496818 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.43□□□□□ -1.38
CACNA1C-229ENST00000496818 CCDC149Q6ZUS6 474 aa6.43□□□□□ -1.38
CACNA1C-229ENST00000496818 SV2BQ7L1I2 683 aa6.43□□□□□ -1.38
CACNA1C-229ENST00000496818 ERMP1Q7Z2K6 904 aa6.43□□□□□ -1.38
CACNA1C-229ENST00000496818 CABP7Q86V35 215 aa6.43□□□□□ -1.38
CACNA1C-229ENST00000496818 PPFIBP1Q86W92 1011 aa6.43□□□□□ -1.38
CACNA1C-229ENST00000496818 ECHDC2Q86YB7 292 aa6.43□□□□□ -1.38
CACNA1C-229ENST00000496818 WFDC8Q8IUA0 241 aa6.43□□□□□ -1.38
CACNA1C-229ENST00000496818 SLC39A11Q8N1S5 342 aa6.43□□□□□ -1.38
CACNA1C-229ENST00000496818 LRRC71Q8N4P6 559 aa6.43□□□□□ -1.38
CACNA1C-229ENST00000496818 TTC9Q92623 222 aa6.43□□□□□ -1.38
CACNA1C-229ENST00000496818 ACSF2Q96CM8 615 aaPredicted RBP6.43□□□□□ -1.38
CACNA1C-229ENST00000496818 CASD1Q96PB1 797 aa6.43□□□□□ -1.38
CACNA1C-229ENST00000496818 TGIF2Q9GZN2 237 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms