RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 DHX38Q92620 1227 aaKnown RBP9.27□□□□□ -0.92
U2AF1-212ENST00000496462 HPS3Q969F9 1004 aa9.27□□□□□ -0.92
U2AF1-212ENST00000496462 HPDLQ96IR7 371 aa9.27□□□□□ -0.92
U2AF1-212ENST00000496462 TRAIPQ9BWF2 469 aa9.27□□□□□ -0.92
U2AF1-212ENST00000496462 AGO3Q9H9G7 860 aaKnown RBP9.27□□□□□ -0.92
U2AF1-212ENST00000496462 LACTBL1A8MY62 500 aa9.27□□□□□ -0.93
U2AF1-212ENST00000496462 MRE11P49959 708 aa9.27□□□□□ -0.93
U2AF1-212ENST00000496462 MGAT3Q09327 533 aa9.27□□□□□ -0.93
U2AF1-212ENST00000496462 SMARCB1Q12824 385 aa9.27□□□□□ -0.93
U2AF1-212ENST00000496462 GPM6BQ13491 265 aa9.27□□□□□ -0.93
U2AF1-212ENST00000496462 DPCR1Q3MIW9 517 aa9.27□□□□□ -0.93
U2AF1-212ENST00000496462 ANKRD40Q6AI12 368 aa9.27□□□□□ -0.93
U2AF1-212ENST00000496462 GDF15Q99988 308 aa9.27□□□□□ -0.93
U2AF1-212ENST00000496462 PDE11AQ9HCR9 933 aa9.27□□□□□ -0.93
U2AF1-212ENST00000496462 TAB2Q9NYJ8 693 aa9.27□□□□□ -0.93
U2AF1-212ENST00000496462 RBBP6Q7Z6E9 1792 aaKnown RBP9.27□□□□□ -0.93
U2AF1-212ENST00000496462 ADGRA3Q8IWK6 1321 aa9.27□□□□□ -0.93
U2AF1-212ENST00000496462 C9IYK1 514 aa9.27□□□□□ -0.93
U2AF1-212ENST00000496462 GCLMP48507 274 aa9.27□□□□□ -0.93
U2AF1-212ENST00000496462 GLRA4Q5JXX5 417 aa9.27□□□□□ -0.93
U2AF1-212ENST00000496462 DAW1Q8N136 415 aa9.27□□□□□ -0.93
U2AF1-212ENST00000496462 LRRC52Q8N7C0 313 aa9.27□□□□□ -0.93
U2AF1-212ENST00000496462 LINC01465Q8N7H1 131 aa9.27□□□□□ -0.93
U2AF1-212ENST00000496462 TOP1MTQ969P6 601 aa9.27□□□□□ -0.93
U2AF1-212ENST00000496462 NXF3Q9H4D5 531 aaKnown RBP9.27□□□□□ -0.93
U2AF1-212ENST00000496462 CYP3A43Q9HB55 503 aa9.27□□□□□ -0.93
U2AF1-212ENST00000496462 TELO2Q9Y4R8 837 aa9.27□□□□□ -0.93
U2AF1-212ENST00000496462 SNX9Q9Y5X1 595 aa9.27□□□□□ -0.93
U2AF1-212ENST00000496462 ZBTB42B2RXF5 422 aa9.26□□□□□ -0.93
U2AF1-212ENST00000496462 NBNO60934 754 aa9.26□□□□□ -0.93
U2AF1-212ENST00000496462 GJB5O95377 273 aa9.26□□□□□ -0.93
U2AF1-212ENST00000496462 KRT9P35527 623 aa9.26□□□□□ -0.93
U2AF1-212ENST00000496462 TRIM71Q2Q1W2 868 aaKnown RBP9.26□□□□□ -0.93
U2AF1-212ENST00000496462 CCDC149Q6ZUS6 474 aa9.26□□□□□ -0.93
U2AF1-212ENST00000496462 MRPL10Q7Z7H8 261 aaKnown RBP9.26□□□□□ -0.93
U2AF1-212ENST00000496462 CCDC117Q8IWD4 279 aaPredicted RBP9.26□□□□□ -0.93
U2AF1-212ENST00000496462 NACA2Q9H009 215 aa9.26□□□□□ -0.93
U2AF1-212ENST00000496462 LUC7L2Q9Y383 392 aaKnown RBP9.26□□□□□ -0.93
U2AF1-212ENST00000496462 PCDHB4Q9Y5E5 795 aa9.26□□□□□ -0.93
U2AF1-212ENST00000496462 CASTOR2A6NHX0 329 aa9.26□□□□□ -0.93
U2AF1-212ENST00000496462 POLR2BP30876 1174 aaKnown RBP9.26□□□□□ -0.93
U2AF1-212ENST00000496462 ZNF445P59923 1031 aa9.26□□□□□ -0.93
U2AF1-212ENST00000496462 MKRN4PQ13434 485 aaPredicted RBP9.26□□□□□ -0.93
U2AF1-212ENST00000496462 WDR72Q3MJ13 1102 aa9.26□□□□□ -0.93
U2AF1-212ENST00000496462 CTXN3Q4LDR2 81 aa9.26□□□□□ -0.93
U2AF1-212ENST00000496462 CBWD2Q8IUF1 395 aa9.26□□□□□ -0.93
U2AF1-212ENST00000496462 LPPQ93052 612 aa9.26□□□□□ -0.93
U2AF1-212ENST00000496462 ZBTB45Q96K62 511 aaPredicted RBP9.26□□□□□ -0.93
U2AF1-212ENST00000496462 NDST4Q9H3R1 872 aa9.26□□□□□ -0.93
U2AF1-212ENST00000496462 MTUS1Q9ULD2 1270 aa9.26□□□□□ -0.93
U2AF1-212ENST00000496462 A8MXQ7 604 aa9.26□□□□□ -0.93
U2AF1-212ENST00000496462 PRRG1O14668 218 aa9.26□□□□□ -0.93
U2AF1-212ENST00000496462 ITGB3P05106 788 aa9.26□□□□□ -0.93
U2AF1-212ENST00000496462 MSNP26038 577 aaKnown RBP9.26□□□□□ -0.93
U2AF1-212ENST00000496462 KLRC2P26717 231 aa9.26□□□□□ -0.93
U2AF1-212ENST00000496462 STAT1P42224 750 aa9.26□□□□□ -0.93
U2AF1-212ENST00000496462 GLUD2P49448 558 aa9.26□□□□□ -0.93
U2AF1-212ENST00000496462 FXR1P51114 621 aaKnown RBP eCLIP9.26□□□□□ -0.93
U2AF1-212ENST00000496462 COPB1P53618 953 aaKnown RBP9.26□□□□□ -0.93
U2AF1-212ENST00000496462 RPL10AP62906 217 aaKnown RBP9.26□□□□□ -0.93
U2AF1-212ENST00000496462 SPA17Q15506 151 aa9.26□□□□□ -0.93
U2AF1-212ENST00000496462 FAM171A1Q5VUB5 890 aa9.26□□□□□ -0.93
U2AF1-212ENST00000496462 SPATA2LQ8IUW3 424 aaPredicted RBP9.26□□□□□ -0.93
U2AF1-212ENST00000496462 MICALL1Q8N3F8 863 aa9.26□□□□□ -0.93
U2AF1-212ENST00000496462 GCNT4Q9P109 453 aa9.26□□□□□ -0.93
U2AF1-212ENST00000496462 SMIM28A0A1B0GU29 152 aa9.25□□□□□ -0.93
U2AF1-212ENST00000496462 ARL5CA6NH57 179 aa9.25□□□□□ -0.93
U2AF1-212ENST00000496462 ANKRD63C9JTQ0 380 aa9.25□□□□□ -0.93
U2AF1-212ENST00000496462 CYB561D2O14569 222 aa9.25□□□□□ -0.93
U2AF1-212ENST00000496462 SYN3O14994 580 aa9.25□□□□□ -0.93
U2AF1-212ENST00000496462 KLRC4O43908 158 aa9.25□□□□□ -0.93
U2AF1-212ENST00000496462 XYLBO75191 536 aa9.25□□□□□ -0.93
U2AF1-212ENST00000496462 LRG1P02750 347 aa9.25□□□□□ -0.93
U2AF1-212ENST00000496462 KCNA4P22459 653 aa9.25□□□□□ -0.93
U2AF1-212ENST00000496462 ALDH1A3P47895 512 aa9.25□□□□□ -0.93
U2AF1-212ENST00000496462 YWHAHQ04917 246 aaPredicted RBP9.25□□□□□ -0.93
U2AF1-212ENST00000496462 KCNH2Q12809 1159 aa9.25□□□□□ -0.93
U2AF1-212ENST00000496462 SHHQ15465 462 aa9.25□□□□□ -0.93
U2AF1-212ENST00000496462 HSP90AA4PQ58FG1 418 aa9.25□□□□□ -0.93
U2AF1-212ENST00000496462 C9orf50Q5SZB4 431 aa9.25□□□□□ -0.93
U2AF1-212ENST00000496462 KCNT2Q6UVM3 1135 aa9.25□□□□□ -0.93
U2AF1-212ENST00000496462 TRAPPC11Q7Z392 1133 aa9.25□□□□□ -0.93
U2AF1-212ENST00000496462 KIAA0895Q8NCT3 520 aa9.25□□□□□ -0.93
U2AF1-212ENST00000496462 ARNTL2Q8WYA1 636 aa9.25□□□□□ -0.93
U2AF1-212ENST00000496462 SNX27Q96L92 541 aa9.25□□□□□ -0.93
U2AF1-212ENST00000496462 TRIM62Q9BVG3 475 aa9.25□□□□□ -0.93
U2AF1-212ENST00000496462 LSM14BQ9BX40 385 aaKnown RBP9.25□□□□□ -0.93
U2AF1-212ENST00000496462 NIF3L1Q9GZT8 377 aa9.25□□□□□ -0.93
U2AF1-212ENST00000496462 FAM124BQ9H5Z6 455 aaPredicted RBP9.25□□□□□ -0.93
U2AF1-212ENST00000496462 CDHR5Q9HBB8 845 aa9.25□□□□□ -0.93
U2AF1-212ENST00000496462 KIAA1257Q9ULG3 409 aa9.25□□□□□ -0.93
U2AF1-212ENST00000496462 TMEM265A0A087WTH1 108 aa9.25□□□□□ -0.93
U2AF1-212ENST00000496462 OR6C75A6NL08 312 aa9.25□□□□□ -0.93
U2AF1-212ENST00000496462 FANCCQ00597 558 aa9.25□□□□□ -0.93
U2AF1-212ENST00000496462 EIF2AQ9BY44 585 aaKnown RBP9.25□□□□□ -0.93
U2AF1-212ENST00000496462 WNT8AQ9H1J5 351 aa9.25□□□□□ -0.93
U2AF1-212ENST00000496462 CBX8Q9HC52 389 aa9.25□□□□□ -0.93
U2AF1-212ENST00000496462 RAB20Q9NX57 234 aa9.25□□□□□ -0.93
U2AF1-212ENST00000496462 CPSF3Q9UKF6 684 aaKnown RBP9.25□□□□□ -0.93
U2AF1-212ENST00000496462 PLXNA1Q9UIW2 1896 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms