RNA–Protein interactions for RNA: ENST00000496262.1

RNF220-217, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 840 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-217ENST00000496262 DRC1Q96MC2 740 aa11.94□□□□□ -0.5
RNF220-217ENST00000496262 PLIN2Q99541 437 aa11.94□□□□□ -0.5
RNF220-217ENST00000496262 KXD1Q9BQD3 176 aa11.94□□□□□ -0.5
RNF220-217ENST00000496262 CCDC94Q9BW85 323 aaPredicted RBP11.94□□□□□ -0.5
RNF220-217ENST00000496262 TARS2Q9BW92 718 aaKnown RBP11.94□□□□□ -0.5
RNF220-217ENST00000496262 MRPL4Q9BYD3 311 aaKnown RBP11.94□□□□□ -0.5
RNF220-217ENST00000496262 ARHGEF3Q9NR81 526 aa11.94□□□□□ -0.5
RNF220-217ENST00000496262 TOPORSQ9NS56 1045 aaPredicted RBP11.94□□□□□ -0.5
RNF220-217ENST00000496262 HCFC1R1Q9NWW0 138 aa11.94□□□□□ -0.5
RNF220-217ENST00000496262 ANKFY1Q9P2R3 1169 aa11.94□□□□□ -0.5
RNF220-217ENST00000496262 TNFSF13BQ9Y275 285 aa11.94□□□□□ -0.5
RNF220-217ENST00000496262 ANHXE9PGG2 379 aa11.93□□□□□ -0.5
RNF220-217ENST00000496262 PODXLO00592 558 aa11.93□□□□□ -0.5
RNF220-217ENST00000496262 DYNC1I1O14576 645 aa11.93□□□□□ -0.5
RNF220-217ENST00000496262 TRAPPC3O43617 180 aa11.93□□□□□ -0.5
RNF220-217ENST00000496262 DCNP07585 359 aaKnown RBP11.93□□□□□ -0.5
RNF220-217ENST00000496262 HNRNPA1P09651 372 aaKnown RBP eCLIP11.93□□□□□ -0.5
RNF220-217ENST00000496262 FGFR3P22607 806 aa11.93□□□□□ -0.5
RNF220-217ENST00000496262 GRM5P41594 1212 aa11.93□□□□□ -0.5
RNF220-217ENST00000496262 RAB33AQ14088 237 aa11.93□□□□□ -0.5
RNF220-217ENST00000496262 UPP1Q16831 310 aa11.93□□□□□ -0.5
RNF220-217ENST00000496262 SEZ6Q53EL9 994 aa11.93□□□□□ -0.5
RNF220-217ENST00000496262 RINT1Q6NUQ1 792 aa11.93□□□□□ -0.5
RNF220-217ENST00000496262 TAS1R3Q7RTX0 852 aa11.93□□□□□ -0.5
RNF220-217ENST00000496262 KCNK18Q7Z418 384 aa11.93□□□□□ -0.5
RNF220-217ENST00000496262 MTERF4Q7Z6M4 381 aaKnown RBP11.93□□□□□ -0.5
RNF220-217ENST00000496262 ITFG1Q8TB96 612 aa11.93□□□□□ -0.5
RNF220-217ENST00000496262 FGF13Q92913 245 aa11.93□□□□□ -0.5
RNF220-217ENST00000496262 NXPE3Q969Y0 559 aa11.93□□□□□ -0.5
RNF220-217ENST00000496262 DDX27Q96GQ7 796 aaKnown RBP11.93□□□□□ -0.5
RNF220-217ENST00000496262 CHAMP1Q96JM3 812 aa11.93□□□□□ -0.5
RNF220-217ENST00000496262 UROC1Q96N76 676 aa11.93□□□□□ -0.5
RNF220-217ENST00000496262 ACO2Q99798 780 aaKnown RBP11.93□□□□□ -0.5
RNF220-217ENST00000496262 MTRRQ9UBK8 725 aa11.93□□□□□ -0.5
RNF220-217ENST00000496262 CDH7Q9ULB5 785 aa11.93□□□□□ -0.5
RNF220-217ENST00000496262 STK24Q9Y6E0 443 aa11.93□□□□□ -0.5
RNF220-217ENST00000496262 CACNA1HO95180 2353 aa11.93□□□□□ -0.5
RNF220-217ENST00000496262 PROB1E7EW31 1015 aa11.92□□□□□ -0.5
RNF220-217ENST00000496262 TMEM189-UBE2V1I3L0A0 370 aa11.92□□□□□ -0.5
RNF220-217ENST00000496262 LAD1O00515 517 aa11.92□□□□□ -0.5
RNF220-217ENST00000496262 LETM1O95202 739 aaPredicted RBP11.92□□□□□ -0.5
RNF220-217ENST00000496262 PAPLNO95428 1278 aa11.92□□□□□ -0.5
RNF220-217ENST00000496262 MATR3P43243 847 aaKnown RBP eCLIP11.92□□□□□ -0.5
RNF220-217ENST00000496262 GPC5P78333 572 aa11.92□□□□□ -0.5
RNF220-217ENST00000496262 STRN3Q13033 797 aa11.92□□□□□ -0.5
RNF220-217ENST00000496262 MAPK7Q13164 816 aa11.92□□□□□ -0.5
RNF220-217ENST00000496262 PABPC1LQ4VXU2 614 aaKnown RBP11.92□□□□□ -0.5
RNF220-217ENST00000496262 CCDC183Q5T5S1 534 aa11.92□□□□□ -0.5
RNF220-217ENST00000496262 CD300LGQ6UXG3 332 aa11.92□□□□□ -0.5
RNF220-217ENST00000496262 RNF214Q8ND24 703 aa11.92□□□□□ -0.5
RNF220-217ENST00000496262 C18orf25Q96B23 403 aaPredicted RBP11.92□□□□□ -0.5
RNF220-217ENST00000496262 ZBTB45Q96K62 511 aaPredicted RBP11.92□□□□□ -0.5
RNF220-217ENST00000496262 SNX27Q96L92 541 aa11.92□□□□□ -0.5
RNF220-217ENST00000496262 ZMAT2Q96NC0 199 aaKnown RBP11.92□□□□□ -0.5
RNF220-217ENST00000496262 ACAP3Q96P50 834 aa11.92□□□□□ -0.5
RNF220-217ENST00000496262 MMTAG2Q9BU76 263 aaKnown RBP11.92□□□□□ -0.5
RNF220-217ENST00000496262 FOXQ1Q9C009 403 aa11.92□□□□□ -0.5
RNF220-217ENST00000496262 SLC38A7Q9NVC3 462 aa11.92□□□□□ -0.5
RNF220-217ENST00000496262 ARHGAP28Q9P2N2 729 aa11.92□□□□□ -0.5
RNF220-217ENST00000496262 DNMT3BQ9UBC3 853 aaKnown RBP11.92□□□□□ -0.5
RNF220-217ENST00000496262 NUB1Q9Y5A7 615 aa11.92□□□□□ -0.5
RNF220-217ENST00000496262 DMDP11532 3685 aa11.91□□□□□ -0.5
RNF220-217ENST00000496262 NPHP3-ACAD11A0A0J9YXS1 232 aa11.91□□□□□ -0.5
RNF220-217ENST00000496262 VWA3AA6NCI4 1184 aa11.91□□□□□ -0.5
RNF220-217ENST00000496262 H3BQV1 296 aa11.91□□□□□ -0.5
RNF220-217ENST00000496262 PRRG1O14668 218 aa11.91□□□□□ -0.5
RNF220-217ENST00000496262 LRRN2O75325 713 aa11.91□□□□□ -0.5
RNF220-217ENST00000496262 MCF2P10911 925 aa11.91□□□□□ -0.5
RNF220-217ENST00000496262 HOXA9P31269 272 aa11.91□□□□□ -0.5
RNF220-217ENST00000496262 PRPHP41219 470 aa11.91□□□□□ -0.5
RNF220-217ENST00000496262 ROR1Q01973 937 aa11.91□□□□□ -0.5
RNF220-217ENST00000496262 SNW1Q13573 536 aaKnown RBP11.91□□□□□ -0.5
RNF220-217ENST00000496262 VARS2Q5ST30 1063 aaKnown RBP11.91□□□□□ -0.5
RNF220-217ENST00000496262 MPZL3Q6UWV2 235 aa11.91□□□□□ -0.5
RNF220-217ENST00000496262 ANKS3Q6ZW76 656 aa11.91□□□□□ -0.5
RNF220-217ENST00000496262 C1orf186Q6ZWK4 172 aa11.91□□□□□ -0.5
RNF220-217ENST00000496262 MTSS1LQ765P7 747 aa11.91□□□□□ -0.5
RNF220-217ENST00000496262 TMEM130Q8N3G9 435 aa11.91□□□□□ -0.5
RNF220-217ENST00000496262 KCNG4Q8TDN1 519 aa11.91□□□□□ -0.5
RNF220-217ENST00000496262 CDK5RAP3Q96JB5 506 aa11.91□□□□□ -0.5
RNF220-217ENST00000496262 PKNOX2Q96KN3 472 aa11.91□□□□□ -0.5
RNF220-217ENST00000496262 TMEM134Q9H6X4 195 aa11.91□□□□□ -0.5
RNF220-217ENST00000496262 PTPRHQ9HD43 1115 aa11.91□□□□□ -0.5
RNF220-217ENST00000496262 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.91□□□□□ -0.5
RNF220-217ENST00000496262 MRPS23Q9Y3D9 190 aaKnown RBP11.91□□□□□ -0.5
RNF220-217ENST00000496262 SIT1Q9Y3P8 196 aa11.91□□□□□ -0.5
RNF220-217ENST00000496262 KIF3AQ9Y496 699 aa11.91□□□□□ -0.5
RNF220-217ENST00000496262 ZFP37Q9Y6Q3 630 aaPredicted RBP11.91□□□□□ -0.5
RNF220-217ENST00000496262 COL4A3Q01955 1670 aa11.91□□□□□ -0.5
RNF220-217ENST00000496262 VWA8A3KMH1 1905 aa11.9□□□□□ -0.5
RNF220-217ENST00000496262 LRG1P02750 347 aa11.9□□□□□ -0.5
RNF220-217ENST00000496262 ELF1P32519 619 aa11.9□□□□□ -0.5
RNF220-217ENST00000496262 SPAG1Q07617 926 aa11.9□□□□□ -0.5
RNF220-217ENST00000496262 NOLC1Q14978 699 aaKnown RBP eCLIP11.9□□□□□ -0.5
RNF220-217ENST00000496262 SLC5A9Q2M3M2 681 aa11.9□□□□□ -0.5
RNF220-217ENST00000496262 ALKAL1Q6UXT8 129 aa11.9□□□□□ -0.5
RNF220-217ENST00000496262 NPAS3Q8IXF0 933 aa11.9□□□□□ -0.5
RNF220-217ENST00000496262 ADSSL1Q8N142 457 aa11.9□□□□□ -0.5
RNF220-217ENST00000496262 MCRS1Q96EZ8 462 aa11.9□□□□□ -0.5
RNF220-217ENST00000496262 BICD1Q96G01 975 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms