RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 FRMD3A2A2Y4 597 aa11.12□□□□□ -0.63
RAB11FIP3-211ENST00000495663 H0YCG3 227 aa11.12□□□□□ -0.63
RAB11FIP3-211ENST00000495663 RPS6KA5O75582 802 aa11.12□□□□□ -0.63
RAB11FIP3-211ENST00000495663 GHRP10912 638 aa11.12□□□□□ -0.63
RAB11FIP3-211ENST00000495663 DARSP14868 501 aaKnown RBP11.12□□□□□ -0.63
RAB11FIP3-211ENST00000495663 SFPQP23246 707 aaKnown RBP eCLIP11.12□□□□□ -0.636e-6■□□□□ 8.7
RAB11FIP3-211ENST00000495663 CASP1P29466 404 aa11.12□□□□□ -0.63
RAB11FIP3-211ENST00000495663 NPTX2P47972 431 aa11.12□□□□□ -0.63
RAB11FIP3-211ENST00000495663 PTENP60484 403 aa11.12□□□□□ -0.63
RAB11FIP3-211ENST00000495663 FPGSQ05932 587 aa11.12□□□□□ -0.63
RAB11FIP3-211ENST00000495663 PPIGQ13427 754 aaKnown RBP eCLIP11.12□□□□□ -0.638e-25■■□□□ 12.7
RAB11FIP3-211ENST00000495663 HERC4Q5GLZ8 1057 aaPredicted RBP11.12□□□□□ -0.63
RAB11FIP3-211ENST00000495663 FBXO47Q5MNV8 452 aa11.12□□□□□ -0.63
RAB11FIP3-211ENST00000495663 CDCA2Q69YH5 1023 aaPredicted RBP11.12□□□□□ -0.63
RAB11FIP3-211ENST00000495663 TSHZ1Q6ZSZ6 1077 aa11.12□□□□□ -0.63
RAB11FIP3-211ENST00000495663 UNC13DQ70J99 1090 aa11.12□□□□□ -0.63
RAB11FIP3-211ENST00000495663 FAM178BQ8IXR5 827 aa11.12□□□□□ -0.63
RAB11FIP3-211ENST00000495663 RPUSD2Q8IZ73 545 aaKnown RBP11.12□□□□□ -0.63
RAB11FIP3-211ENST00000495663 SLC17A8Q8NDX2 589 aa11.12□□□□□ -0.63
RAB11FIP3-211ENST00000495663 STK32AQ8WU08 396 aa11.12□□□□□ -0.63
RAB11FIP3-211ENST00000495663 TMEM40Q8WWA1 233 aa11.12□□□□□ -0.63
RAB11FIP3-211ENST00000495663 BADQ92934 168 aa11.12□□□□□ -0.63
RAB11FIP3-211ENST00000495663 CCDC47Q96A33 483 aaKnown RBP11.12□□□□□ -0.63
RAB11FIP3-211ENST00000495663 NTPCRQ9BSD7 190 aaKnown RBP11.12□□□□□ -0.63
RAB11FIP3-211ENST00000495663 IFT122Q9HBG6 1241 aa11.12□□□□□ -0.63
RAB11FIP3-211ENST00000495663 KMT5AQ9NQR1 393 aa11.12□□□□□ -0.63
RAB11FIP3-211ENST00000495663 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.12□□□□□ -0.63
RAB11FIP3-211ENST00000495663 PHLPP2Q6ZVD8 1323 aa11.11□□□□□ -0.63
RAB11FIP3-211ENST00000495663 INO80B-WBP1J3KQ70 363 aa11.11□□□□□ -0.63
RAB11FIP3-211ENST00000495663 J3QW42 95 aa11.11□□□□□ -0.63
RAB11FIP3-211ENST00000495663 GPR182O15218 404 aa11.11□□□□□ -0.63
RAB11FIP3-211ENST00000495663 SLC16A4O15374 487 aa11.11□□□□□ -0.63
RAB11FIP3-211ENST00000495663 NBNO60934 754 aa11.11□□□□□ -0.63
RAB11FIP3-211ENST00000495663 CXCL10P02778 98 aa11.11□□□□□ -0.63
RAB11FIP3-211ENST00000495663 PFKMP08237 780 aa11.11□□□□□ -0.63
RAB11FIP3-211ENST00000495663 CSF2RAP15509 400 aa11.11□□□□□ -0.63
RAB11FIP3-211ENST00000495663 SCP2P22307 547 aa11.11□□□□□ -0.63
RAB11FIP3-211ENST00000495663 ABCD1P33897 745 aa11.11□□□□□ -0.63
RAB11FIP3-211ENST00000495663 EFNA5P52803 228 aa11.11□□□□□ -0.63
RAB11FIP3-211ENST00000495663 NCKAP1LP55160 1127 aa11.11□□□□□ -0.63
RAB11FIP3-211ENST00000495663 COASYQ13057 564 aa11.11□□□□□ -0.63
RAB11FIP3-211ENST00000495663 PAK2Q13177 524 aa11.11□□□□□ -0.63
RAB11FIP3-211ENST00000495663 LPIN1Q14693 890 aa11.11□□□□□ -0.63
RAB11FIP3-211ENST00000495663 PCBP1Q15365 356 aaKnown RBP eCLIP11.11□□□□□ -0.63
RAB11FIP3-211ENST00000495663 DEFB128Q7Z7B8 93 aa11.11□□□□□ -0.63
RAB11FIP3-211ENST00000495663 SFR1Q86XK3 245 aa11.11□□□□□ -0.63
RAB11FIP3-211ENST00000495663 GPT2Q8TD30 523 aa11.11□□□□□ -0.63
RAB11FIP3-211ENST00000495663 APBB2Q92870 758 aa11.11□□□□□ -0.63
RAB11FIP3-211ENST00000495663 NSUN5Q96P11 429 aaKnown RBP11.11□□□□□ -0.63
RAB11FIP3-211ENST00000495663 MKNK1Q9BUB5 465 aa11.11□□□□□ -0.63
RAB11FIP3-211ENST00000495663 IFIH1Q9BYX4 1025 aaKnown RBP11.11□□□□□ -0.63
RAB11FIP3-211ENST00000495663 SAP130Q9H0E3 1048 aa11.11□□□□□ -0.63
RAB11FIP3-211ENST00000495663 OLFML3Q9NRN5 406 aa11.11□□□□□ -0.63
RAB11FIP3-211ENST00000495663 NOC2LQ9Y3T9 749 aaKnown RBP11.11□□□□□ -0.63
RAB11FIP3-211ENST00000495663 MICAL3Q7RTP6 2002 aa11.11□□□□□ -0.63
RAB11FIP3-211ENST00000495663 TET1Q8NFU7 2136 aa11.11□□□□□ -0.63
RAB11FIP3-211ENST00000495663 ADGRA3Q8IWK6 1321 aa11.1□□□□□ -0.63
RAB11FIP3-211ENST00000495663 K7ENM7 598 aa11.1□□□□□ -0.63
RAB11FIP3-211ENST00000495663 K7ERI5 159 aa11.1□□□□□ -0.63
RAB11FIP3-211ENST00000495663 KLRC4O43908 158 aa11.1□□□□□ -0.63
RAB11FIP3-211ENST00000495663 CSDE1O75534 798 aaKnown RBP11.1□□□□□ -0.63
RAB11FIP3-211ENST00000495663 ERLIN2O94905 339 aa11.1□□□□□ -0.63
RAB11FIP3-211ENST00000495663 SMC2O95347 1197 aa11.1□□□□□ -0.63
RAB11FIP3-211ENST00000495663 RPN1P04843 607 aaKnown RBP11.1□□□□□ -0.63
RAB11FIP3-211ENST00000495663 CD52P31358 61 aa11.1□□□□□ -0.63
RAB11FIP3-211ENST00000495663 NRLP54845 237 aa11.1□□□□□ -0.63
RAB11FIP3-211ENST00000495663 MBTD1Q05BQ5 628 aa11.1□□□□□ -0.63
RAB11FIP3-211ENST00000495663 NCBP1Q09161 790 aaKnown RBP11.1□□□□□ -0.63
RAB11FIP3-211ENST00000495663 PNOCQ13519 176 aa11.1□□□□□ -0.63
RAB11FIP3-211ENST00000495663 GPNMBQ14956 572 aa11.1□□□□□ -0.63
RAB11FIP3-211ENST00000495663 MAPK6Q16659 721 aa11.1□□□□□ -0.63
RAB11FIP3-211ENST00000495663 PLEKHG4Q58EX7 1191 aa11.1□□□□□ -0.63
RAB11FIP3-211ENST00000495663 FAM43BQ6ZT52 329 aaPredicted RBP11.1□□□□□ -0.63
RAB11FIP3-211ENST00000495663 CATSPER4Q7RTX7 472 aa11.1□□□□□ -0.63
RAB11FIP3-211ENST00000495663 HAUS6Q7Z4H7 955 aa11.1□□□□□ -0.63
RAB11FIP3-211ENST00000495663 FAM228AQ86W67 206 aa11.1□□□□□ -0.63
RAB11FIP3-211ENST00000495663 ETFBKMTQ8IXQ9 262 aa11.1□□□□□ -0.63
RAB11FIP3-211ENST00000495663 TMEM161BQ8NDZ6 487 aa11.1□□□□□ -0.63
RAB11FIP3-211ENST00000495663 SEPT8Q92599 483 aa11.1□□□□□ -0.63
RAB11FIP3-211ENST00000495663 KIFC3Q9BVG8 833 aa11.1□□□□□ -0.63
RAB11FIP3-211ENST00000495663 OSBPL7Q9BZF2 842 aa11.1□□□□□ -0.63
RAB11FIP3-211ENST00000495663 MINDY3Q9H8M7 445 aa11.1□□□□□ -0.63
RAB11FIP3-211ENST00000495663 AGO3Q9H9G7 860 aaKnown RBP11.1□□□□□ -0.63
RAB11FIP3-211ENST00000495663 MRPL44Q9H9J2 332 aaKnown RBP11.1□□□□□ -0.63
RAB11FIP3-211ENST00000495663 IL23AQ9NPF7 189 aa11.1□□□□□ -0.63
RAB11FIP3-211ENST00000495663 EXOC1Q9NV70 894 aa11.1□□□□□ -0.63
RAB11FIP3-211ENST00000495663 PRMT7Q9NVM4 692 aaPredicted RBP11.1□□□□□ -0.63
RAB11FIP3-211ENST00000495663 RMND1Q9NWS8 449 aa11.1□□□□□ -0.63
RAB11FIP3-211ENST00000495663 ARHGAP28Q9P2N2 729 aa11.1□□□□□ -0.63
RAB11FIP3-211ENST00000495663 PADI3Q9ULW8 664 aa11.1□□□□□ -0.63
RAB11FIP3-211ENST00000495663 KCNMB2Q9Y691 235 aa11.1□□□□□ -0.63
RAB11FIP3-211ENST00000495663 DENND3A2RUS2 1198 aa11.09□□□□□ -0.63
RAB11FIP3-211ENST00000495663 GCNT3O95395 438 aa11.09□□□□□ -0.63
RAB11FIP3-211ENST00000495663 PRKCBP05771 671 aa11.09□□□□□ -0.63
RAB11FIP3-211ENST00000495663 ACTN1P12814 892 aa11.09□□□□□ -0.63
RAB11FIP3-211ENST00000495663 FGFR4P22455 802 aa11.09□□□□□ -0.63
RAB11FIP3-211ENST00000495663 NMT1P30419 496 aaKnown RBP11.09□□□□□ -0.63
RAB11FIP3-211ENST00000495663 EHHADHQ08426 723 aa11.09□□□□□ -0.63
RAB11FIP3-211ENST00000495663 STRN3Q13033 797 aa11.09□□□□□ -0.63
RAB11FIP3-211ENST00000495663 PSMD2Q13200 908 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms