RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 HIDE1A8MVS5 230 aa21.06■□□□□ 0.96
HDAC4-212ENST00000495497 EFEMP2O95967 443 aa21.06■□□□□ 0.96
HDAC4-212ENST00000495497 CYP3A5P20815 502 aa21.06■□□□□ 0.96
HDAC4-212ENST00000495497 BRCC3P46736 316 aa21.06■□□□□ 0.96
HDAC4-212ENST00000495497 TFAMQ00059 246 aaKnown RBP21.06■□□□□ 0.96
HDAC4-212ENST00000495497 CYP24A1Q07973 514 aa21.06■□□□□ 0.96
HDAC4-212ENST00000495497 TCEAL5Q5H9L2 206 aa21.06■□□□□ 0.96
HDAC4-212ENST00000495497 SCARA3Q6AZY7 606 aa21.06■□□□□ 0.96
HDAC4-212ENST00000495497 KLHL10Q6JEL2 608 aa21.06■□□□□ 0.96
HDAC4-212ENST00000495497 SLC9A9Q8IVB4 645 aa21.06■□□□□ 0.96
HDAC4-212ENST00000495497 MAFAQ8NHW3 353 aaPredicted RBP21.06■□□□□ 0.96
HDAC4-212ENST00000495497 EEF2KMTQ96G04 330 aa21.06■□□□□ 0.96
HDAC4-212ENST00000495497 DDX27Q96GQ7 796 aaKnown RBP21.06■□□□□ 0.96
HDAC4-212ENST00000495497 POP1Q99575 1024 aaKnown RBP21.06■□□□□ 0.96
HDAC4-212ENST00000495497 GTPBP4Q9BZE4 634 aaKnown RBP21.06■□□□□ 0.96
HDAC4-212ENST00000495497 C2CD2Q9Y426 696 aa21.06■□□□□ 0.96
HDAC4-212ENST00000495497 PTPRJQ12913 1337 aa21.05■□□□□ 0.96
HDAC4-212ENST00000495497 I3L4J1 428 aa21.05■□□□□ 0.96
HDAC4-212ENST00000495497 XPOTO43592 962 aaKnown RBP21.05■□□□□ 0.96
HDAC4-212ENST00000495497 CXCL14O95715 111 aa21.05■□□□□ 0.96
HDAC4-212ENST00000495497 SOD2P04179 222 aa21.05■□□□□ 0.96
HDAC4-212ENST00000495497 NR2F2P24468 414 aa21.05■□□□□ 0.96
HDAC4-212ENST00000495497 LRPAP1P30533 357 aa21.05■□□□□ 0.96
HDAC4-212ENST00000495497 RPL9P32969 192 aaKnown RBP21.05■□□□□ 0.96
HDAC4-212ENST00000495497 CEP135Q66GS9 1140 aa21.05■□□□□ 0.96
HDAC4-212ENST00000495497 ANKRD40Q6AI12 368 aa21.05■□□□□ 0.96
HDAC4-212ENST00000495497 CENPPQ6IPU0 288 aa21.05■□□□□ 0.96
HDAC4-212ENST00000495497 RBM23Q86U06 439 aaKnown RBP21.05■□□□□ 0.96
HDAC4-212ENST00000495497 RNF168Q8IYW5 571 aaPredicted RBP21.05■□□□□ 0.96
HDAC4-212ENST00000495497 PLEKHO2Q8TD55 490 aa21.05■□□□□ 0.96
HDAC4-212ENST00000495497 CCDC127Q96BQ5 260 aa21.05■□□□□ 0.96
HDAC4-212ENST00000495497 MFSD14AQ96MC6 490 aa21.05■□□□□ 0.96
HDAC4-212ENST00000495497 TSPAN18Q96SJ8 248 aa21.05■□□□□ 0.96
HDAC4-212ENST00000495497 HERC2P3Q9BVR0 1158 aa21.05■□□□□ 0.96
HDAC4-212ENST00000495497 NSUN3Q9H649 340 aaKnown RBP21.05■□□□□ 0.96
HDAC4-212ENST00000495497 DPP3Q9NY33 737 aa21.05■□□□□ 0.96
HDAC4-212ENST00000495497 TMEM189-UBE2V1I3L0A0 370 aa21.04■□□□□ 0.96
HDAC4-212ENST00000495497 C2CD2LO14523 706 aa21.04■□□□□ 0.96
HDAC4-212ENST00000495497 MBD3O95983 291 aa21.04■□□□□ 0.96
HDAC4-212ENST00000495497 DLATP10515 647 aaKnown RBP21.04■□□□□ 0.96
HDAC4-212ENST00000495497 GTF2F1P35269 517 aaKnown RBP eCLIP21.04■□□□□ 0.96
HDAC4-212ENST00000495497 ADAM9Q13443 819 aa21.04■□□□□ 0.96
HDAC4-212ENST00000495497 STIM1Q13586 685 aa21.04■□□□□ 0.96
HDAC4-212ENST00000495497 NFIL3Q16649 462 aa21.04■□□□□ 0.96
HDAC4-212ENST00000495497 TIGD5Q53EQ6 642 aa21.04■□□□□ 0.96
HDAC4-212ENST00000495497 TRIML1Q8N9V2 468 aa21.04■□□□□ 0.96
HDAC4-212ENST00000495497 OR5B17Q8NGF7 314 aa21.04■□□□□ 0.96
HDAC4-212ENST00000495497 TMEM174Q8WUU8 243 aa21.04■□□□□ 0.96
HDAC4-212ENST00000495497 GZF1Q9H116 711 aaPredicted RBP21.04■□□□□ 0.96
HDAC4-212ENST00000495497 IGFLR1Q9H665 355 aa21.04■□□□□ 0.96
HDAC4-212ENST00000495497 CTNND2Q9UQB3 1225 aa21.04■□□□□ 0.96
HDAC4-212ENST00000495497 PRRC2BQ5JSZ5 2229 aaKnown RBP21.03■□□□□ 0.96
HDAC4-212ENST00000495497 PER2O15055 1255 aa21.03■□□□□ 0.96
HDAC4-212ENST00000495497 AKAP3O75969 853 aa21.03■□□□□ 0.96
HDAC4-212ENST00000495497 CTSAP10619 480 aa21.03■□□□□ 0.96
HDAC4-212ENST00000495497 CCNE1P24864 410 aa21.03■□□□□ 0.96
HDAC4-212ENST00000495497 STX17P56962 302 aa21.03■□□□□ 0.96
HDAC4-212ENST00000495497 MYBPC2Q14324 1141 aa21.03■□□□□ 0.96
HDAC4-212ENST00000495497 SMC1AQ14683 1233 aaKnown RBP21.03■□□□□ 0.96
HDAC4-212ENST00000495497 PSMD6Q15008 389 aa21.03■□□□□ 0.96
HDAC4-212ENST00000495497 FAM171A1Q5VUB5 890 aa21.03■□□□□ 0.96
HDAC4-212ENST00000495497 C9orf57Q5W0N0 161 aa21.03■□□□□ 0.96
HDAC4-212ENST00000495497 NT5DC4Q86YG4 428 aa21.03■□□□□ 0.96
HDAC4-212ENST00000495497 NELFBQ8WX92 580 aa21.03■□□□□ 0.96
HDAC4-212ENST00000495497 DHTKD1Q96HY7 919 aaPredicted RBP21.03■□□□□ 0.96
HDAC4-212ENST00000495497 TSG101Q99816 390 aa21.03■□□□□ 0.96
HDAC4-212ENST00000495497 MTMR12Q9C0I1 747 aa21.03■□□□□ 0.96
HDAC4-212ENST00000495497 NGRNQ9NPE2 291 aaKnown RBP21.03■□□□□ 0.96
HDAC4-212ENST00000495497 ANK1P16157 1881 aa21.03■□□□□ 0.96
HDAC4-212ENST00000495497 SF3B1O75533 1304 aaKnown RBP eCLIP21.03■□□□□ 0.964e-12■■■■■ 275.7
HDAC4-212ENST00000495497 SPTBN5Q9NRC6 3674 aaKnown RBP21.02■□□□□ 0.96
HDAC4-212ENST00000495497 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.02■□□□□ 0.96
HDAC4-212ENST00000495497 C2orf71A6NGG8 1288 aa21.02■□□□□ 0.96
HDAC4-212ENST00000495497 PSMA7O14818 248 aa21.02■□□□□ 0.96
HDAC4-212ENST00000495497 NRIP1P48552 1158 aa21.02■□□□□ 0.96
HDAC4-212ENST00000495497 HYAL1Q12794 435 aa21.02■□□□□ 0.96
HDAC4-212ENST00000495497 SURF1Q15526 300 aa21.02■□□□□ 0.96
HDAC4-212ENST00000495497 PTPN14Q15678 1187 aa21.02■□□□□ 0.96
HDAC4-212ENST00000495497 EDRF1Q3B7T1 1238 aa21.02■□□□□ 0.96
HDAC4-212ENST00000495497 USP41Q3LFD5 358 aa21.02■□□□□ 0.96
HDAC4-212ENST00000495497 CEP57Q86XR8 500 aa21.02■□□□□ 0.96
HDAC4-212ENST00000495497 MRPL43Q8N983 215 aaKnown RBP21.02■□□□□ 0.96
HDAC4-212ENST00000495497 C1orf127Q8N9H9 656 aa21.02■□□□□ 0.96
HDAC4-212ENST00000495497 CACTINQ8WUQ7 758 aaKnown RBP21.02■□□□□ 0.96
HDAC4-212ENST00000495497 FNBP1Q96RU3 617 aa21.02■□□□□ 0.96
HDAC4-212ENST00000495497 CHST7Q9NS84 486 aa21.02■□□□□ 0.96
HDAC4-212ENST00000495497 INTS13Q9NVM9 706 aa21.02■□□□□ 0.96
HDAC4-212ENST00000495497 FRMD4BQ9Y2L6 1034 aa21.02■□□□□ 0.96
HDAC4-212ENST00000495497 NUB1Q9Y5A7 615 aa21.02■□□□□ 0.96
HDAC4-212ENST00000495497 PDCD11Q14690 1871 aaKnown RBP21.02■□□□□ 0.96
HDAC4-212ENST00000495497 EYSQ5T1H1 3165 aa21.01■□□□□ 0.95
HDAC4-212ENST00000495497 ANO9A1A5B4 782 aa21.01■□□□□ 0.95
HDAC4-212ENST00000495497 LRRIQ3A6PVS8 624 aaPredicted RBP21.01■□□□□ 0.95
HDAC4-212ENST00000495497 PIRO00625 290 aa21.01■□□□□ 0.95
HDAC4-212ENST00000495497 SPTLC1O15269 473 aa21.01■□□□□ 0.95
HDAC4-212ENST00000495497 TMEM191BP0C7N4 346 aa21.01■□□□□ 0.95
HDAC4-212ENST00000495497 TNNI1P19237 187 aa21.01■□□□□ 0.95
HDAC4-212ENST00000495497 RPL13P26373 211 aaKnown RBP21.01■□□□□ 0.95
HDAC4-212ENST00000495497 TKTP29401 623 aaKnown RBP21.01■□□□□ 0.95
HDAC4-212ENST00000495497 GLUD2P49448 558 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms