RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 C12orf76Q8N812 135 aaPredicted RBP19.19■□□□□ 0.66
HDAC4-211ENST00000494800 FAM212AQ96EL1 285 aa19.19■□□□□ 0.66
HDAC4-211ENST00000494800 STRA6Q9BX79 667 aa19.19■□□□□ 0.66
HDAC4-211ENST00000494800 CPSF3Q9UKF6 684 aaKnown RBP19.19■□□□□ 0.66
HDAC4-211ENST00000494800 STYXL1Q9Y6J8 313 aa19.19■□□□□ 0.66
HDAC4-211ENST00000494800 MUC3AQ02505 3323 aa19.18■□□□□ 0.66
HDAC4-211ENST00000494800 LACTBL1A8MY62 500 aa19.18■□□□□ 0.66
HDAC4-211ENST00000494800 LOC730098B7Z3J9 87 aa19.18■□□□□ 0.66
HDAC4-211ENST00000494800 ANKRD63C9JTQ0 380 aa19.18■□□□□ 0.66
HDAC4-211ENST00000494800 FAM189A1O60320 539 aa19.18■□□□□ 0.66
HDAC4-211ENST00000494800 MYBP10242 640 aa19.18■□□□□ 0.66
HDAC4-211ENST00000494800 RPL17P18621 184 aaKnown RBP19.18■□□□□ 0.66
HDAC4-211ENST00000494800 FGFR3P22607 806 aa19.18■□□□□ 0.66
HDAC4-211ENST00000494800 MCM4P33991 863 aa19.18■□□□□ 0.66
HDAC4-211ENST00000494800 CNNM4Q6P4Q7 775 aa19.18■□□□□ 0.66
HDAC4-211ENST00000494800 CYP26C1Q6V0L0 522 aa19.18■□□□□ 0.66
HDAC4-211ENST00000494800 C15orf39Q6ZRI6 1047 aa19.18■□□□□ 0.66
HDAC4-211ENST00000494800 BEST2Q8NFU1 509 aa19.18■□□□□ 0.66
HDAC4-211ENST00000494800 LNX1Q8TBB1 728 aaPredicted RBP19.18■□□□□ 0.66
HDAC4-211ENST00000494800 LEO1Q8WVC0 666 aaPredicted RBP19.18■□□□□ 0.66
HDAC4-211ENST00000494800 C7orf25Q9BPX7 421 aa19.18■□□□□ 0.66
HDAC4-211ENST00000494800 TUBGCP4Q9UGJ1 667 aa19.18■□□□□ 0.66
HDAC4-211ENST00000494800 DERAQ9Y315 318 aa19.18■□□□□ 0.66
HDAC4-211ENST00000494800 ZDHHC9Q9Y397 364 aa19.18■□□□□ 0.66
HDAC4-211ENST00000494800 SYN3O14994 580 aa19.17■□□□□ 0.66
HDAC4-211ENST00000494800 TGM5O43548 720 aa19.17■□□□□ 0.66
HDAC4-211ENST00000494800 LDHAP00338 332 aaKnown RBP19.17■□□□□ 0.66
HDAC4-211ENST00000494800 ACOT2P49753 483 aa19.17■□□□□ 0.66
HDAC4-211ENST00000494800 SPAG1Q07617 926 aa19.17■□□□□ 0.66
HDAC4-211ENST00000494800 ZBTB41Q5SVQ8 909 aa19.17■□□□□ 0.66
HDAC4-211ENST00000494800 LIN9Q5TKA1 542 aa19.17■□□□□ 0.66
HDAC4-211ENST00000494800 GPR149Q86SP6 731 aa19.17■□□□□ 0.66
HDAC4-211ENST00000494800 C3orf58Q8NDZ4 430 aa19.17■□□□□ 0.66
HDAC4-211ENST00000494800 CMASQ8NFW8 434 aaPredicted RBP19.17■□□□□ 0.66
HDAC4-211ENST00000494800 ASB7Q9H672 318 aa19.17■□□□□ 0.66
HDAC4-211ENST00000494800 TSHZ2Q9NRE2 1034 aa19.17■□□□□ 0.66
HDAC4-211ENST00000494800 USP25Q9UHP3 1055 aa19.17■□□□□ 0.66
HDAC4-211ENST00000494800 PI4K2BG5E9Z4 385 aa19.16■□□□□ 0.66
HDAC4-211ENST00000494800 H7C4K7 107 aa19.16■□□□□ 0.66
HDAC4-211ENST00000494800 MEFVO15553 781 aaPredicted RBP19.16■□□□□ 0.66
HDAC4-211ENST00000494800 DCXO43602 365 aa19.16■□□□□ 0.66
HDAC4-211ENST00000494800 ADRB2P07550 413 aa19.16■□□□□ 0.66
HDAC4-211ENST00000494800 GARTP22102 1010 aa19.16■□□□□ 0.66
HDAC4-211ENST00000494800 PAX3P23760 479 aa19.16■□□□□ 0.66
HDAC4-211ENST00000494800 CMA1P23946 247 aa19.16■□□□□ 0.66
HDAC4-211ENST00000494800 TKTP29401 623 aaKnown RBP19.16■□□□□ 0.66
HDAC4-211ENST00000494800 LRPAP1P30533 357 aa19.16■□□□□ 0.66
HDAC4-211ENST00000494800 BRCC3P46736 316 aa19.16■□□□□ 0.66
HDAC4-211ENST00000494800 CASP5P51878 434 aa19.16■□□□□ 0.66
HDAC4-211ENST00000494800 NUCB2P80303 420 aa19.16■□□□□ 0.66
HDAC4-211ENST00000494800 TMEM132DQ14C87 1099 aa19.16■□□□□ 0.66
HDAC4-211ENST00000494800 RNF135Q8IUD6 432 aa19.16■□□□□ 0.66
HDAC4-211ENST00000494800 KREMEN2Q8NCW0 462 aa19.16■□□□□ 0.66
HDAC4-211ENST00000494800 APPL2Q8NEU8 664 aa19.16■□□□□ 0.66
HDAC4-211ENST00000494800 CLSTN3Q9BQT9 956 aa19.16■□□□□ 0.66
HDAC4-211ENST00000494800 POMKQ9H5K3 350 aa19.16■□□□□ 0.66
HDAC4-211ENST00000494800 ZDHHC7Q9NXF8 308 aa19.16■□□□□ 0.66
HDAC4-211ENST00000494800 MTRRQ9UBK8 725 aa19.16■□□□□ 0.66
HDAC4-211ENST00000494800 BACE2Q9Y5Z0 518 aa19.16■□□□□ 0.66
HDAC4-211ENST00000494800 CCDC195A0A1B0GUA6 201 aa19.15■□□□□ 0.66
HDAC4-211ENST00000494800 TISP43B9A030 160 aa19.15■□□□□ 0.66
HDAC4-211ENST00000494800 I3L4J1 428 aa19.15■□□□□ 0.66
HDAC4-211ENST00000494800 KIAA0391O15091 583 aaKnown RBP19.15■□□□□ 0.66
HDAC4-211ENST00000494800 EIF3DO15371 548 aaKnown RBP eCLIP19.15■□□□□ 0.66
HDAC4-211ENST00000494800 IL18RAPO95256 599 aa19.15■□□□□ 0.66
HDAC4-211ENST00000494800 WEE2P0C1S8 567 aa19.15■□□□□ 0.66
HDAC4-211ENST00000494800 SLFN14P0C7P3 912 aa19.15■□□□□ 0.66
HDAC4-211ENST00000494800 SPATA31D3P0C874 917 aa19.15■□□□□ 0.66
HDAC4-211ENST00000494800 AFMP43652 599 aa19.15■□□□□ 0.66
HDAC4-211ENST00000494800 KCNA1Q09470 495 aa19.15■□□□□ 0.66
HDAC4-211ENST00000494800 ZBTB6Q15916 424 aa19.15■□□□□ 0.66
HDAC4-211ENST00000494800 FAM26FQ5R3K3 315 aa19.15■□□□□ 0.66
HDAC4-211ENST00000494800 JADE1Q6IE81 842 aa19.15■□□□□ 0.66
HDAC4-211ENST00000494800 CD300LGQ6UXG3 332 aa19.15■□□□□ 0.66
HDAC4-211ENST00000494800 SPATA31D4Q6ZUB0 917 aa19.15■□□□□ 0.66
HDAC4-211ENST00000494800 CCDC149Q6ZUS6 474 aa19.15■□□□□ 0.66
HDAC4-211ENST00000494800 UNC13DQ70J99 1090 aa19.15■□□□□ 0.66
HDAC4-211ENST00000494800 RHOBTB2Q9BYZ6 727 aa19.15■□□□□ 0.66
HDAC4-211ENST00000494800 PIDD1Q9HB75 910 aa19.15■□□□□ 0.66
HDAC4-211ENST00000494800 C2CD2Q9Y426 696 aa19.15■□□□□ 0.66
HDAC4-211ENST00000494800 BDP1A6H8Y1 2624 aa19.15■□□□□ 0.66
HDAC4-211ENST00000494800 CITO14578 2027 aa19.14■□□□□ 0.65
HDAC4-211ENST00000494800 PVALEFA0A1B0GWK0 134 aa19.14■□□□□ 0.65
HDAC4-211ENST00000494800 ARHGEF37A1IGU5 675 aa19.14■□□□□ 0.65
HDAC4-211ENST00000494800 TULP1O00294 542 aaPredicted RBP19.14■□□□□ 0.65
HDAC4-211ENST00000494800 PRPF6O94906 941 aaKnown RBP19.14■□□□□ 0.65
HDAC4-211ENST00000494800 PFKFB1P16118 471 aa19.14■□□□□ 0.65
HDAC4-211ENST00000494800 ADSSP30520 456 aa19.14■□□□□ 0.65
HDAC4-211ENST00000494800 OR1D2P34982 312 aa19.14■□□□□ 0.65
HDAC4-211ENST00000494800 RAB33AQ14088 237 aa19.14■□□□□ 0.65
HDAC4-211ENST00000494800 VARS2Q5ST30 1063 aaKnown RBP19.14■□□□□ 0.65
HDAC4-211ENST00000494800 SPATA1Q5VX52 437 aa19.14■□□□□ 0.65
HDAC4-211ENST00000494800 KANK3Q6NY19 840 aa19.14■□□□□ 0.65
HDAC4-211ENST00000494800 ARMCX5Q6P1M9 558 aa19.14■□□□□ 0.65
HDAC4-211ENST00000494800 LILRA6Q6PI73 481 aa19.14■□□□□ 0.65
HDAC4-211ENST00000494800 NT5DC4Q86YG4 428 aa19.14■□□□□ 0.65
HDAC4-211ENST00000494800 TDRD5Q8NAT2 981 aaKnown RBP19.14■□□□□ 0.65
HDAC4-211ENST00000494800 ACSF2Q96CM8 615 aaPredicted RBP19.14■□□□□ 0.65
HDAC4-211ENST00000494800 SUSD3Q96L08 255 aa19.14■□□□□ 0.65
HDAC4-211ENST00000494800 FAM213AQ9BRX8 229 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms