RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 PLS3P13797 630 aa25.42■■□□□ 1.66
COL27A1-208ENST00000494780 SMTNP53814 917 aa25.42■■□□□ 1.66
COL27A1-208ENST00000494780 STRN3Q13033 797 aa25.42■■□□□ 1.66
COL27A1-208ENST00000494780 MCTP1Q6DN14 999 aa25.42■■□□□ 1.66
COL27A1-208ENST00000494780 ADSSL1Q8N142 457 aa25.42■■□□□ 1.66
COL27A1-208ENST00000494780 PJA1Q8NG27 643 aa25.42■■□□□ 1.66
COL27A1-208ENST00000494780 AVENQ9NQS1 362 aaPredicted RBP25.42■■□□□ 1.66
COL27A1-208ENST00000494780 MRPS23Q9Y3D9 190 aaKnown RBP25.42■■□□□ 1.66
COL27A1-208ENST00000494780 NUB1Q9Y5A7 615 aa25.42■■□□□ 1.66
COL27A1-208ENST00000494780 NOTCH4Q99466 2003 aa25.41■■□□□ 1.66
COL27A1-208ENST00000494780 TBC1D4O60343 1298 aa25.41■■□□□ 1.66
COL27A1-208ENST00000494780 TOM1L1O75674 476 aa25.41■■□□□ 1.66
COL27A1-208ENST00000494780 RHOP08100 348 aa25.41■■□□□ 1.66
COL27A1-208ENST00000494780 ELF1P32519 619 aa25.41■■□□□ 1.66
COL27A1-208ENST00000494780 PFKPQ01813 784 aa25.41■■□□□ 1.66
COL27A1-208ENST00000494780 PRKCQQ04759 706 aa25.41■■□□□ 1.66
COL27A1-208ENST00000494780 RABEP1Q15276 862 aa25.41■■□□□ 1.66
COL27A1-208ENST00000494780 ZRSR1Q15695 479 aaKnown RBP25.41■■□□□ 1.66
COL27A1-208ENST00000494780 C8orf34Q49A92 452 aa25.41■■□□□ 1.66
COL27A1-208ENST00000494780 SYT2Q8N9I0 419 aaPredicted RBP25.41■■□□□ 1.66
COL27A1-208ENST00000494780 ZBTB45Q96K62 511 aaPredicted RBP25.41■■□□□ 1.66
COL27A1-208ENST00000494780 FOXQ1Q9C009 403 aa25.41■■□□□ 1.66
COL27A1-208ENST00000494780 GDE1Q9NZC3 331 aa25.41■■□□□ 1.66
COL27A1-208ENST00000494780 WDR27A2RRH5 827 aa25.4■■□□□ 1.66
COL27A1-208ENST00000494780 LRG1P02750 347 aa25.4■■□□□ 1.66
COL27A1-208ENST00000494780 HARSP12081 509 aaKnown RBP25.4■■□□□ 1.66
COL27A1-208ENST00000494780 ATF2P15336 505 aa25.4■■□□□ 1.66
COL27A1-208ENST00000494780 PTPN2P17706 415 aa25.4■■□□□ 1.66
COL27A1-208ENST00000494780 SNW1Q13573 536 aaKnown RBP25.4■■□□□ 1.66
COL27A1-208ENST00000494780 MRPL58Q14197 206 aaKnown RBP25.4■■□□□ 1.66
COL27A1-208ENST00000494780 NOLC1Q14978 699 aaKnown RBP eCLIP25.4■■□□□ 1.66
COL27A1-208ENST00000494780 ZPBP2Q6X784 338 aa25.4■■□□□ 1.66
COL27A1-208ENST00000494780 C1orf210Q8IVY1 113 aa25.4■■□□□ 1.66
COL27A1-208ENST00000494780 TMEM161BQ8NDZ6 487 aa25.4■■□□□ 1.66
COL27A1-208ENST00000494780 ING5Q8WYH8 240 aa25.4■■□□□ 1.66
COL27A1-208ENST00000494780 C18orf25Q96B23 403 aaPredicted RBP25.4■■□□□ 1.66
COL27A1-208ENST00000494780 PNMA5Q96PV4 448 aa25.4■■□□□ 1.66
COL27A1-208ENST00000494780 KXD1Q9BQD3 176 aa25.4■■□□□ 1.66
COL27A1-208ENST00000494780 DDX23Q9BUQ8 820 aaKnown RBP25.4■■□□□ 1.66
COL27A1-208ENST00000494780 KCND2Q9NZV8 630 aa25.4■■□□□ 1.66
COL27A1-208ENST00000494780 DMDP11532 3685 aa25.39■■□□□ 1.66
COL27A1-208ENST00000494780 KANSL1LA0AUZ9 987 aa25.39■■□□□ 1.66
COL27A1-208ENST00000494780 PRRG1O14668 218 aa25.39■■□□□ 1.66
COL27A1-208ENST00000494780 MEFVO15553 781 aaPredicted RBP25.39■■□□□ 1.66
COL27A1-208ENST00000494780 MAPTP10636 758 aaKnown RBP25.39■■□□□ 1.66
COL27A1-208ENST00000494780 RAD51AP2Q09MP3 1159 aa25.39■■□□□ 1.66
COL27A1-208ENST00000494780 MLF2Q15773 248 aaPredicted RBP25.39■■□□□ 1.66
COL27A1-208ENST00000494780 SLC44A4Q53GD3 710 aa25.39■■□□□ 1.66
COL27A1-208ENST00000494780 TCEAL8Q8IYN2 117 aa25.39■■□□□ 1.66
COL27A1-208ENST00000494780 SUSD3Q96L08 255 aa25.39■■□□□ 1.66
COL27A1-208ENST00000494780 ANKFY1Q9P2R3 1169 aa25.39■■□□□ 1.66
COL27A1-208ENST00000494780 CITO14578 2027 aa25.39■■□□□ 1.65
COL27A1-208ENST00000494780 ECI2O75521 394 aa25.38■■□□□ 1.65
COL27A1-208ENST00000494780 GLULP15104 373 aa25.38■■□□□ 1.65
COL27A1-208ENST00000494780 SLC12A3P55017 1021 aa25.38■■□□□ 1.65
COL27A1-208ENST00000494780 ARPP19P56211 112 aa25.38■■□□□ 1.65
COL27A1-208ENST00000494780 SLC5A9Q2M3M2 681 aa25.38■■□□□ 1.65
COL27A1-208ENST00000494780 SLC10A6Q3KNW5 377 aa25.38■■□□□ 1.65
COL27A1-208ENST00000494780 ARL6IP4Q66PJ3 421 aaKnown RBP25.38■■□□□ 1.65
COL27A1-208ENST00000494780 TPGS2Q68CL5 300 aa25.38■■□□□ 1.65
COL27A1-208ENST00000494780 MCRS1Q96EZ8 462 aa25.38■■□□□ 1.65
COL27A1-208ENST00000494780 CDK5RAP3Q96JB5 506 aa25.38■■□□□ 1.65
COL27A1-208ENST00000494780 FBXL5Q9UKA1 691 aa25.38■■□□□ 1.65
COL27A1-208ENST00000494780 CFAP54Q96N23 3096 aa25.37■■□□□ 1.65
COL27A1-208ENST00000494780 VWA3AA6NCI4 1184 aa25.37■■□□□ 1.65
COL27A1-208ENST00000494780 CLDN3O15551 220 aa25.37■■□□□ 1.65
COL27A1-208ENST00000494780 LMNAP02545 664 aaKnown RBP25.37■■□□□ 1.65
COL27A1-208ENST00000494780 MCM4P33991 863 aa25.37■■□□□ 1.65
COL27A1-208ENST00000494780 MCL1Q07820 350 aa25.37■■□□□ 1.65
COL27A1-208ENST00000494780 CTXN3Q4LDR2 81 aa25.37■■□□□ 1.65
COL27A1-208ENST00000494780 ZC3H14Q6PJT7 736 aaKnown RBP25.37■■□□□ 1.65
COL27A1-208ENST00000494780 APPL2Q8NEU8 664 aa25.37■■□□□ 1.65
COL27A1-208ENST00000494780 OSBPL6Q9BZF3 934 aa25.37■■□□□ 1.65
COL27A1-208ENST00000494780 CYP4F11Q9HBI6 524 aa25.37■■□□□ 1.65
COL27A1-208ENST00000494780 MAFFQ9ULX9 164 aa25.37■■□□□ 1.65
COL27A1-208ENST00000494780 GVINP1Q7Z2Y8 2422 aa25.37■■□□□ 1.65
COL27A1-208ENST00000494780 H0YCG3 227 aa25.36■■□□□ 1.65
COL27A1-208ENST00000494780 PLA2G4BP0C869 781 aa25.36■■□□□ 1.65
COL27A1-208ENST00000494780 SP9P0CG40 484 aa25.36■■□□□ 1.65
COL27A1-208ENST00000494780 TMEM119Q4V9L6 283 aa25.36■■□□□ 1.65
COL27A1-208ENST00000494780 SEZ6Q53EL9 994 aa25.36■■□□□ 1.65
COL27A1-208ENST00000494780 ZNF280DQ6N043 979 aa25.36■■□□□ 1.65
COL27A1-208ENST00000494780 KCNG4Q8TDN1 519 aa25.36■■□□□ 1.65
COL27A1-208ENST00000494780 TBC1D32Q96NH3 1257 aa25.36■■□□□ 1.65
COL27A1-208ENST00000494780 PLIN2Q99541 437 aa25.36■■□□□ 1.65
COL27A1-208ENST00000494780 PLEKHA5Q9HAU0 1116 aa25.36■■□□□ 1.65
COL27A1-208ENST00000494780 LARSQ9P2J5 1176 aaKnown RBP25.36■■□□□ 1.65
COL27A1-208ENST00000494780 INSL5Q9Y5Q6 135 aa25.36■■□□□ 1.65
COL27A1-208ENST00000494780 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.36■■□□□ 1.65
COL27A1-208ENST00000494780 R4GN57 208 aa25.36■■□□□ 1.65
COL27A1-208ENST00000494780 SPTBN4Q9H254 2564 aa25.36■■□□□ 1.65
COL27A1-208ENST00000494780 ZNF197O14709 1029 aa25.35■■□□□ 1.65
COL27A1-208ENST00000494780 LRRN2O75325 713 aa25.35■■□□□ 1.65
COL27A1-208ENST00000494780 MICAL2O94851 1124 aa25.35■■□□□ 1.65
COL27A1-208ENST00000494780 SEC24AO95486 1093 aa25.35■■□□□ 1.65
COL27A1-208ENST00000494780 CEBPBP17676 345 aa25.35■■□□□ 1.65
COL27A1-208ENST00000494780 PRSS36Q5K4E3 855 aa25.35■■□□□ 1.65
COL27A1-208ENST00000494780 DDX12PQ92771 950 aa25.35■■□□□ 1.65
COL27A1-208ENST00000494780 KCNN1Q92952 543 aa25.35■■□□□ 1.65
COL27A1-208ENST00000494780 TMX3Q96JJ7 454 aa25.35■■□□□ 1.65
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