RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 PTPAQ15257 358 aa10.48□□□□□ -0.73
MSH5-218ENST00000494646 AXDND1Q5T1B0 1012 aaPredicted RBP10.48□□□□□ -0.73
MSH5-218ENST00000494646 LIN9Q5TKA1 542 aa10.48□□□□□ -0.73
MSH5-218ENST00000494646 PDXDC1Q6P996 788 aa10.48□□□□□ -0.73
MSH5-218ENST00000494646 CYP26C1Q6V0L0 522 aa10.48□□□□□ -0.73
MSH5-218ENST00000494646 ZPBP2Q6X784 338 aa10.48□□□□□ -0.73
MSH5-218ENST00000494646 DYMQ7RTS9 669 aa10.48□□□□□ -0.73
MSH5-218ENST00000494646 FLCNQ8NFG4 579 aa10.48□□□□□ -0.73
MSH5-218ENST00000494646 STAMQ92783 540 aa10.48□□□□□ -0.73
MSH5-218ENST00000494646 FAM212AQ96EL1 285 aa10.48□□□□□ -0.73
MSH5-218ENST00000494646 DDX27Q96GQ7 796 aaKnown RBP10.48□□□□□ -0.73
MSH5-218ENST00000494646 PHOX2BQ99453 314 aa10.48□□□□□ -0.73
MSH5-218ENST00000494646 KCNH6Q9H252 994 aa10.48□□□□□ -0.73
MSH5-218ENST00000494646 SLC38A7Q9NVC3 462 aa10.48□□□□□ -0.73
MSH5-218ENST00000494646 ZDHHC7Q9NXF8 308 aa10.48□□□□□ -0.73
MSH5-218ENST00000494646 FBXW11Q9UKB1 542 aa10.48□□□□□ -0.73
MSH5-218ENST00000494646 TBX20Q9UMR3 447 aa10.48□□□□□ -0.73
MSH5-218ENST00000494646 NUB1Q9Y5A7 615 aa10.48□□□□□ -0.73
MSH5-218ENST00000494646 CLUHO75153 1309 aa10.48□□□□□ -0.73
MSH5-218ENST00000494646 LACTBL1A8MY62 500 aa10.47□□□□□ -0.73
MSH5-218ENST00000494646 K7ENM7 598 aa10.47□□□□□ -0.73
MSH5-218ENST00000494646 SLC26A4O43511 780 aa10.47□□□□□ -0.73
MSH5-218ENST00000494646 C1RP00736 705 aa10.47□□□□□ -0.73
MSH5-218ENST00000494646 CFHP08603 1231 aa10.47□□□□□ -0.73
MSH5-218ENST00000494646 CXCL8P10145 99 aa10.47□□□□□ -0.73
MSH5-218ENST00000494646 LAMP2P13473 410 aa10.47□□□□□ -0.73
MSH5-218ENST00000494646 FSHRP23945 695 aa10.47□□□□□ -0.73
MSH5-218ENST00000494646 RPL9P32969 192 aaKnown RBP10.47□□□□□ -0.73
MSH5-218ENST00000494646 LIG4P49917 911 aa10.47□□□□□ -0.73
MSH5-218ENST00000494646 MCL1Q07820 350 aa10.47□□□□□ -0.73
MSH5-218ENST00000494646 TCF15Q12870 199 aa10.47□□□□□ -0.73
MSH5-218ENST00000494646 RESTQ13127 1097 aa10.47□□□□□ -0.73
MSH5-218ENST00000494646 ZC2HC1CQ53FD0 456 aaPredicted RBP10.47□□□□□ -0.73
MSH5-218ENST00000494646 VARS2Q5ST30 1063 aaKnown RBP10.47□□□□□ -0.73
MSH5-218ENST00000494646 ZBTB41Q5SVQ8 909 aa10.47□□□□□ -0.73
MSH5-218ENST00000494646 SLC44A3Q8N4M1 653 aa10.47□□□□□ -0.73
MSH5-218ENST00000494646 SLC7A14Q8TBB6 771 aa10.47□□□□□ -0.73
MSH5-218ENST00000494646 LARP4BQ92615 738 aaKnown RBP10.47□□□□□ -0.73
MSH5-218ENST00000494646 RHOBTB2Q9BYZ6 727 aa10.47□□□□□ -0.73
MSH5-218ENST00000494646 CCSER1Q9C0I3 900 aa10.47□□□□□ -0.73
MSH5-218ENST00000494646 MFSD1Q9H3U5 465 aa10.47□□□□□ -0.73
MSH5-218ENST00000494646 PARVGQ9HBI0 331 aa10.47□□□□□ -0.73
MSH5-218ENST00000494646 HCFC1R1Q9NWW0 138 aa10.47□□□□□ -0.73
MSH5-218ENST00000494646 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.47□□□□□ -0.73
MSH5-218ENST00000494646 CNTN3Q9P232 1028 aa10.47□□□□□ -0.73
MSH5-218ENST00000494646 IGSF9Q9P2J2 1179 aa10.47□□□□□ -0.73
MSH5-218ENST00000494646 MTRRQ9UBK8 725 aa10.47□□□□□ -0.73
MSH5-218ENST00000494646 TUBGCP4Q9UGJ1 667 aa10.47□□□□□ -0.73
MSH5-218ENST00000494646 FBXL21Q9UKT6 434 aa10.47□□□□□ -0.73
MSH5-218ENST00000494646 ODF2LQ9ULJ1 636 aa10.47□□□□□ -0.73
MSH5-218ENST00000494646 SRPRBQ9Y5M8 271 aaKnown RBP10.47□□□□□ -0.73
MSH5-218ENST00000494646 ANKRD63C9JTQ0 380 aa10.46□□□□□ -0.73
MSH5-218ENST00000494646 H0Y858 1186 aa10.46□□□□□ -0.73
MSH5-218ENST00000494646 H0YCG3 227 aa10.46□□□□□ -0.73
MSH5-218ENST00000494646 STK25O00506 426 aa10.46□□□□□ -0.73
MSH5-218ENST00000494646 RIOK3O14730 519 aaKnown RBP10.46□□□□□ -0.73
MSH5-218ENST00000494646 HNRNPDLO14979 420 aaKnown RBP10.46□□□□□ -0.73
MSH5-218ENST00000494646 PI15O43692 258 aa10.46□□□□□ -0.73
MSH5-218ENST00000494646 CLTAP09496 248 aa10.46□□□□□ -0.73
MSH5-218ENST00000494646 ELF1P32519 619 aa10.46□□□□□ -0.73
MSH5-218ENST00000494646 MCM4P33991 863 aa10.46□□□□□ -0.73
MSH5-218ENST00000494646 GUCY2FP51841 1108 aa10.46□□□□□ -0.73
MSH5-218ENST00000494646 UVSSAQ2YD98 709 aa10.46□□□□□ -0.73
MSH5-218ENST00000494646 FOXD4L5Q5VV16 416 aaPredicted RBP10.46□□□□□ -0.73
MSH5-218ENST00000494646 RRAGBQ5VZM2 374 aa10.46□□□□□ -0.73
MSH5-218ENST00000494646 ANKS3Q6ZW76 656 aa10.46□□□□□ -0.73
MSH5-218ENST00000494646 TMEM105Q8N8V8 129 aa10.46□□□□□ -0.73
MSH5-218ENST00000494646 ITFG1Q8TB96 612 aa10.46□□□□□ -0.73
MSH5-218ENST00000494646 FOXD4L4Q8WXT5 416 aaPredicted RBP10.46□□□□□ -0.73
MSH5-218ENST00000494646 KIF12Q96FN5 646 aa10.46□□□□□ -0.73
MSH5-218ENST00000494646 USP28Q96RU2 1077 aa10.46□□□□□ -0.73
MSH5-218ENST00000494646 RPP25Q9BUL9 199 aaKnown RBP10.46□□□□□ -0.73
MSH5-218ENST00000494646 IKZF4Q9H2S9 585 aa10.46□□□□□ -0.73
MSH5-218ENST00000494646 RYDENQ9NUL5 291 aaKnown RBP10.46□□□□□ -0.73
MSH5-218ENST00000494646 FAM86C1Q9NVL1 165 aa10.46□□□□□ -0.73
MSH5-218ENST00000494646 TFIP11Q9UBB9 837 aaKnown RBP10.46□□□□□ -0.73
MSH5-218ENST00000494646 EPS15L1Q9UBC2 864 aa10.46□□□□□ -0.73
MSH5-218ENST00000494646 CCDC39Q9UFE4 941 aa10.46□□□□□ -0.73
MSH5-218ENST00000494646 FBXO2Q9UK22 296 aaPredicted RBP10.46□□□□□ -0.73
MSH5-218ENST00000494646 MTMR6Q9Y217 621 aa10.46□□□□□ -0.73
MSH5-218ENST00000494646 TIMM13Q9Y5L4 95 aaPredicted RBP10.46□□□□□ -0.73
MSH5-218ENST00000494646 BACE2Q9Y5Z0 518 aa10.46□□□□□ -0.73
MSH5-218ENST00000494646 TCHHQ07283 1943 aa10.46□□□□□ -0.74
MSH5-218ENST00000494646 MYH15Q9Y2K3 1946 aa10.46□□□□□ -0.74
MSH5-218ENST00000494646 WDR87Q6ZQQ6 2873 aa10.45□□□□□ -0.74
MSH5-218ENST00000494646 SCN1AP35498 2009 aa10.45□□□□□ -0.74
MSH5-218ENST00000494646 TTC26A0AVF1 554 aa10.45□□□□□ -0.74
MSH5-218ENST00000494646 WDR27A2RRH5 827 aa10.45□□□□□ -0.74
MSH5-218ENST00000494646 MYMKA6NI61 221 aa10.45□□□□□ -0.74
MSH5-218ENST00000494646 TISP43B9A030 160 aa10.45□□□□□ -0.74
MSH5-218ENST00000494646 H7C4K7 107 aa10.45□□□□□ -0.74
MSH5-218ENST00000494646 K7ELQ4 463 aaPredicted RBP10.45□□□□□ -0.74
MSH5-218ENST00000494646 XYLBO75191 536 aa10.45□□□□□ -0.74
MSH5-218ENST00000494646 TBCAO75347 108 aaKnown RBP10.45□□□□□ -0.74
MSH5-218ENST00000494646 PAPLNO95428 1278 aa10.45□□□□□ -0.74
MSH5-218ENST00000494646 SEC24AO95486 1093 aa10.45□□□□□ -0.74
MSH5-218ENST00000494646 HNRNPA1P09651 372 aaKnown RBP eCLIP10.45□□□□□ -0.74
MSH5-218ENST00000494646 ACOT2P49753 483 aa10.45□□□□□ -0.74
MSH5-218ENST00000494646 MRE11P49959 708 aa10.45□□□□□ -0.74
MSH5-218ENST00000494646 ZNF131P52739 623 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms