RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 C8orf4Q9NR00 106 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.27□□□□□ -1.73
ATG3-207ENST00000494571 THAP1Q9NVV9 213 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 NDUFA13Q9P0J0 144 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 SEPT10Q9P0V9 454 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 GMIPQ9P107 970 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 TXNDC16Q9P2K2 825 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 STX18Q9P2W9 335 aaKnown RBP4.27□□□□□ -1.73
ATG3-207ENST00000494571 ARPP21Q9UBL0 812 aaPredicted RBP4.27□□□□□ -1.73
ATG3-207ENST00000494571 GABBR1Q9UBS5 961 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 ATPIF1Q9UII2 106 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 AGO2Q9UKV8 859 aaKnown RBP4.27□□□□□ -1.73
ATG3-207ENST00000494571 ATP11BQ9Y2G3 1177 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 RWDD3Q9Y3V2 267 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 PCDHGA11Q9Y5H2 935 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 SNX9Q9Y5X1 595 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 IQGAP3Q86VI3 1631 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 A0A0G2JLW4 131 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 KRIT1O00522 736 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 RASGRF2O14827 1237 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 AQP9O43315 295 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 ECE2O60344 883 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 GAS8O95995 478 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 T-ENOLP0DO92 83 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 ITGA4P13612 1032 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 CPA3P15088 417 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 ANPEPP15144 967 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 FECHP22830 423 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 PTPN4P29074 926 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 PDIA3P30101 505 aaKnown RBP4.27□□□□□ -1.73
ATG3-207ENST00000494571 PTGS2P35354 604 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 EIF4A3P38919 411 aaKnown RBP4.27□□□□□ -1.73
ATG3-207ENST00000494571 PBX2P40425 430 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 NR4A2P43354 598 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 POLD2P49005 469 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 ACADVLP49748 655 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 TPTEP56180 551 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 C21orf59P57076 290 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 ARID5AQ03989 594 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 ZBTB16Q05516 673 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 ITGADQ13349 1161 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 PDAP1Q13442 181 aaKnown RBP4.27□□□□□ -1.73
ATG3-207ENST00000494571 RAPGEF1Q13905 1077 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 SPIDRQ14159 915 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 GNA13Q14344 377 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 KRT81Q14533 505 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 GRIK5Q16478 980 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 NDUFA5Q16718 116 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 TRIM16LQ309B1 348 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 DALRD3Q5D0E6 543 aaKnown RBP4.27□□□□□ -1.73
ATG3-207ENST00000494571 TCP11X2Q5H9J9 407 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 MDH1BQ5I0G3 518 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 SPDYCQ5MJ68 293 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 KLHDC7AQ5VTJ3 777 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 PCNX4Q63HM2 1172 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 TMEM132EQ6IEE7 984 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 CGB2Q6NT52 195 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 XKR5Q6UX68 686 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 RGS9BPQ6ZS82 235 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 RALYLQ86SE5 291 aaKnown RBP4.27□□□□□ -1.73
ATG3-207ENST00000494571 MTDHQ86UE4 582 aaKnown RBP4.27□□□□□ -1.73
ATG3-207ENST00000494571 CCDC84Q86UT8 332 aaPredicted RBP4.27□□□□□ -1.73
ATG3-207ENST00000494571 RHOT2Q8IXI1 618 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 ELMOD2Q8IZ81 293 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 OR6Y1Q8NGX8 325 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 LILRB4Q8NHJ6 448 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 ANKRD49Q8WVL7 239 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 ESR2Q92731 530 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 TAMM41Q96BW9 452 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 CLPTM1LQ96KA5 538 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 CNBD2Q96M20 576 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 GCNAQ96QF7 691 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 VPS35Q96QK1 796 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 CCDC28BQ9BUN5 200 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 HERC2P3Q9BVR0 1158 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 TMEM106CQ9BVX2 250 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 SHCBP1LQ9BZQ2 653 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 SENP6Q9GZR1 1112 aaPredicted RBP4.27□□□□□ -1.73
ATG3-207ENST00000494571 CABP2Q9NPB3 220 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 SLCO1B3Q9NPD5 702 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 FAM207AQ9NSI2 230 aaPredicted RBP4.27□□□□□ -1.73
ATG3-207ENST00000494571 WDR70Q9NW82 654 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 UVRAGQ9P2Y5 699 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 MAGEC2Q9UBF1 373 aaPredicted RBP4.27□□□□□ -1.73
ATG3-207ENST00000494571 ZNF212Q9UDV6 495 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 LIMA1Q9UHB6 759 aaKnown RBP4.27□□□□□ -1.73
ATG3-207ENST00000494571 PA2G4Q9UQ80 394 aaKnown RBP4.27□□□□□ -1.73
ATG3-207ENST00000494571 DMTF1Q9Y222 760 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 EMSYQ7Z589 1322 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 ERVK-7P63135 1459 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 PLEKHG1Q9ULL1 1385 aa4.26□□□□□ -1.73
ATG3-207ENST00000494571 A0A0B4J203 849 aa4.26□□□□□ -1.73
ATG3-207ENST00000494571 KMOO15229 486 aa4.26□□□□□ -1.73
ATG3-207ENST00000494571 ZW10O43264 779 aa4.26□□□□□ -1.73
ATG3-207ENST00000494571 CCNT1O60563 726 aaKnown RBP4.26□□□□□ -1.73
ATG3-207ENST00000494571 TFAP2AP05549 437 aa4.26□□□□□ -1.73
ATG3-207ENST00000494571 PCP11498 1178 aaKnown RBP4.26□□□□□ -1.73
ATG3-207ENST00000494571 GFAPP14136 432 aa4.26□□□□□ -1.73
ATG3-207ENST00000494571 HOXB3P14651 431 aaPredicted RBP4.26□□□□□ -1.73
ATG3-207ENST00000494571 VCLP18206 1134 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms