RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 FAM189A1O60320 539 aa36.17■■■■□ 3.38
CBX4-203ENST00000494546 ENOX2Q16206 610 aaKnown RBP36.17■■■■□ 3.38
CBX4-203ENST00000494546 SMG7Q92540 1137 aaKnown RBP36.17■■■■□ 3.38
CBX4-203ENST00000494546 USTQ9Y2C2 406 aa36.17■■■■□ 3.38
CBX4-203ENST00000494546 VWA8A3KMH1 1905 aa36.16■■■■□ 3.38
CBX4-203ENST00000494546 LACTBL1A8MY62 500 aa36.16■■■■□ 3.38
CBX4-203ENST00000494546 TISP43B9A030 160 aa36.16■■■■□ 3.38
CBX4-203ENST00000494546 ZXDAP98168 799 aa36.16■■■■□ 3.38
CBX4-203ENST00000494546 TMEM130Q8N3G9 435 aa36.16■■■■□ 3.38
CBX4-203ENST00000494546 STAMQ92783 540 aa36.16■■■■□ 3.38
CBX4-203ENST00000494546 HVCN1Q96D96 273 aa36.16■■■■□ 3.38
CBX4-203ENST00000494546 FAM212AQ96EL1 285 aa36.16■■■■□ 3.38
CBX4-203ENST00000494546 PIDD1Q9HB75 910 aa36.16■■■■□ 3.38
CBX4-203ENST00000494546 ZDHHC7Q9NXF8 308 aa36.16■■■■□ 3.38
CBX4-203ENST00000494546 MTRRQ9UBK8 725 aa36.16■■■■□ 3.38
CBX4-203ENST00000494546 OR1D2P34982 312 aa36.15■■■■□ 3.38
CBX4-203ENST00000494546 PTPN21Q16825 1174 aa36.15■■■■□ 3.38
CBX4-203ENST00000494546 CYP26C1Q6V0L0 522 aa36.15■■■■□ 3.38
CBX4-203ENST00000494546 ANKS3Q6ZW76 656 aa36.15■■■■□ 3.38
CBX4-203ENST00000494546 ZNF707Q96C28 371 aaPredicted RBP36.15■■■■□ 3.38
CBX4-203ENST00000494546 IKZF4Q9H2S9 585 aa36.15■■■■□ 3.38
CBX4-203ENST00000494546 PANK4Q9NVE7 773 aa36.15■■■■□ 3.38
CBX4-203ENST00000494546 FBXW11Q9UKB1 542 aa36.15■■■■□ 3.38
CBX4-203ENST00000494546 CDY1Q9Y6F8 540 aa36.15■■■■□ 3.38
CBX4-203ENST00000494546 PPP1R37O75864 691 aa36.14■■■■□ 3.38
CBX4-203ENST00000494546 GCNT3O95395 438 aa36.14■■■■□ 3.38
CBX4-203ENST00000494546 LIN9Q5TKA1 542 aa36.14■■■■□ 3.38
CBX4-203ENST00000494546 ADALQ6DHV7 355 aa36.14■■■■□ 3.38
CBX4-203ENST00000494546 SLFN12LQ6IEE8 588 aa36.14■■■■□ 3.38
CBX4-203ENST00000494546 SHC4Q6S5L8 630 aa36.14■■■■□ 3.38
CBX4-203ENST00000494546 KCNG4Q8TDN1 519 aa36.14■■■■□ 3.38
CBX4-203ENST00000494546 ACSF2Q96CM8 615 aaPredicted RBP36.14■■■■□ 3.38
CBX4-203ENST00000494546 CPSF3Q9UKF6 684 aaKnown RBP36.14■■■■□ 3.38
CBX4-203ENST00000494546 UBQLN1Q9UMX0 589 aaKnown RBP36.14■■■■□ 3.38
CBX4-203ENST00000494546 ZMYND10O75800 440 aa36.13■■■■□ 3.37
CBX4-203ENST00000494546 MCM4P33991 863 aa36.13■■■■□ 3.37
CBX4-203ENST00000494546 RAB33AQ14088 237 aa36.13■■■■□ 3.37
CBX4-203ENST00000494546 OTOP3Q7RTS5 596 aa36.13■■■■□ 3.37
CBX4-203ENST00000494546 ZDHHC14Q8IZN3 488 aa36.13■■■■□ 3.37
CBX4-203ENST00000494546 PLCD3Q8N3E9 789 aa36.13■■■■□ 3.37
CBX4-203ENST00000494546 DHX58Q96C10 678 aa36.13■■■■□ 3.37
CBX4-203ENST00000494546 RHOBTB2Q9BYZ6 727 aa36.13■■■■□ 3.37
CBX4-203ENST00000494546 LIMD1Q9UGP4 676 aa36.13■■■■□ 3.37
CBX4-203ENST00000494546 BACE2Q9Y5Z0 518 aa36.13■■■■□ 3.37
CBX4-203ENST00000494546 C2orf16Q68DN1 1984 aa36.13■■■■□ 3.37
CBX4-203ENST00000494546 ME1P48163 572 aa36.12■■■■□ 3.37
CBX4-203ENST00000494546 ACOT2P49753 483 aa36.12■■■■□ 3.37
CBX4-203ENST00000494546 KCNA1Q09470 495 aa36.12■■■■□ 3.37
CBX4-203ENST00000494546 ZBTB6Q15916 424 aa36.12■■■■□ 3.37
CBX4-203ENST00000494546 E2F4Q16254 413 aa36.12■■■■□ 3.37
CBX4-203ENST00000494546 VARS2Q5ST30 1063 aaKnown RBP36.12■■■■□ 3.37
CBX4-203ENST00000494546 AXDND1Q5T1B0 1012 aaPredicted RBP36.12■■■■□ 3.37
CBX4-203ENST00000494546 RSPO2Q6UXX9 243 aaPredicted RBP36.12■■■■□ 3.37
CBX4-203ENST00000494546 TRIM67Q6ZTA4 783 aa36.12■■■■□ 3.37
CBX4-203ENST00000494546 STRA6Q9BX79 667 aa36.12■■■■□ 3.37
CBX4-203ENST00000494546 PRKD2Q9BZL6 878 aa36.12■■■■□ 3.37
CBX4-203ENST00000494546 WDR6Q9NNW5 1121 aaKnown RBP36.12■■■■□ 3.37
CBX4-203ENST00000494546 OLFML3Q9NRN5 406 aa36.12■■■■□ 3.37
CBX4-203ENST00000494546 AGO2Q9UKV8 859 aaKnown RBP36.12■■■■□ 3.37
CBX4-203ENST00000494546 EXOC7Q9UPT5 735 aa36.12■■■■□ 3.37
CBX4-203ENST00000494546 PDCD11Q14690 1871 aaKnown RBP36.11■■■■□ 3.37
CBX4-203ENST00000494546 FRMD3A2A2Y4 597 aa36.11■■■■□ 3.37
CBX4-203ENST00000494546 SYN3O14994 580 aa36.11■■■■□ 3.37
CBX4-203ENST00000494546 XPOTO43592 962 aaKnown RBP36.11■■■■□ 3.37
CBX4-203ENST00000494546 DNM1Q05193 864 aaKnown RBP36.11■■■■□ 3.37
CBX4-203ENST00000494546 ATL3Q6DD88 541 aa36.11■■■■□ 3.37
CBX4-203ENST00000494546 ACCSQ96QU6 501 aa36.11■■■■□ 3.37
CBX4-203ENST00000494546 TNMDQ9H2S6 317 aa36.11■■■■□ 3.37
CBX4-203ENST00000494546 CFAP45Q9UL16 551 aa36.11■■■■□ 3.37
CBX4-203ENST00000494546 STYXL1Q9Y6J8 313 aa36.11■■■■□ 3.37
CBX4-203ENST00000494546 DENND4AQ7Z401 1863 aa36.11■■■■□ 3.37
CBX4-203ENST00000494546 CLUHO75153 1309 aa36.1■■■■□ 3.37
CBX4-203ENST00000494546 ASGR2P07307 311 aa36.1■■■■□ 3.37
CBX4-203ENST00000494546 C8AP07357 584 aa36.1■■■■□ 3.37
CBX4-203ENST00000494546 CYP3A5P20815 502 aa36.1■■■■□ 3.37
CBX4-203ENST00000494546 GUCY2FP51841 1108 aa36.1■■■■□ 3.37
CBX4-203ENST00000494546 CASP5P51878 434 aa36.1■■■■□ 3.37
CBX4-203ENST00000494546 PPM1LQ5SGD2 360 aa36.1■■■■□ 3.37
CBX4-203ENST00000494546 L1TD1Q5T7N2 865 aaKnown RBP36.1■■■■□ 3.37
CBX4-203ENST00000494546 CD302Q8IX05 232 aa36.1■■■■□ 3.37
CBX4-203ENST00000494546 CCDC65Q8IXS2 484 aa36.1■■■■□ 3.37
CBX4-203ENST00000494546 IQUBQ8NA54 791 aa36.1■■■■□ 3.37
CBX4-203ENST00000494546 POMGNT1Q8WZA1 660 aa36.1■■■■□ 3.37
CBX4-203ENST00000494546 SUSD3Q96L08 255 aa36.1■■■■□ 3.37
CBX4-203ENST00000494546 LRRC27Q9C0I9 530 aa36.1■■■■□ 3.37
CBX4-203ENST00000494546 CUEDC2Q9H467 287 aa36.1■■■■□ 3.37
CBX4-203ENST00000494546 PCDHA7Q9UN72 937 aa36.1■■■■□ 3.37
CBX4-203ENST00000494546 PCDHB13Q9Y5F0 798 aa36.1■■■■□ 3.37
CBX4-203ENST00000494546 GTF3C5Q9Y5Q8 519 aaPredicted RBP36.1■■■■□ 3.37
CBX4-203ENST00000494546 MTCL1Q9Y4B5 1905 aaKnown RBP36.1■■■■□ 3.37
CBX4-203ENST00000494546 ADRB2P07550 413 aa36.09■■■■□ 3.37
CBX4-203ENST00000494546 LRPAP1P30533 357 aa36.09■■■■□ 3.37
CBX4-203ENST00000494546 JADE1Q6IE81 842 aa36.09■■■■□ 3.37
CBX4-203ENST00000494546 HFE2Q6ZVN8 426 aa36.09■■■■□ 3.37
CBX4-203ENST00000494546 TSPAN18Q96SJ8 248 aa36.09■■■■□ 3.37
CBX4-203ENST00000494546 FGFBP2Q9BYJ0 223 aa36.09■■■■□ 3.37
CBX4-203ENST00000494546 HCN4Q9Y3Q4 1203 aa36.09■■■■□ 3.37
CBX4-203ENST00000494546 TMEM221A6NGB7 291 aa36.08■■■■□ 3.37
CBX4-203ENST00000494546 M0R296 226 aa36.08■■■■□ 3.37
CBX4-203ENST00000494546 PAPLNO95428 1278 aa36.08■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms