RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 ZC3H11AO75152 810 aaKnown RBP eCLIP22.2■■□□□ 1.14
KPNA1-210ENST00000494339 STAT1P42224 750 aa22.2■■□□□ 1.14
KPNA1-210ENST00000494339 GJA8P48165 433 aa22.2■■□□□ 1.14
KPNA1-210ENST00000494339 CDK17Q00537 523 aa22.2■■□□□ 1.14
KPNA1-210ENST00000494339 TRPC3Q13507 836 aa22.2■■□□□ 1.14
KPNA1-210ENST00000494339 TDRD12Q587J7 1177 aaKnown RBP22.2■■□□□ 1.14
KPNA1-210ENST00000494339 SLC39A5Q6ZMH5 540 aa22.2■■□□□ 1.14
KPNA1-210ENST00000494339 PPP1R13BQ96KQ4 1090 aa22.2■■□□□ 1.14
KPNA1-210ENST00000494339 KREMEN1Q96MU8 473 aa22.2■■□□□ 1.14
KPNA1-210ENST00000494339 FAM105AQ9NUU6 356 aa22.2■■□□□ 1.14
KPNA1-210ENST00000494339 DAAM1Q9Y4D1 1078 aa22.2■■□□□ 1.14
KPNA1-210ENST00000494339 GFPT2O94808 682 aa22.19■■□□□ 1.14
KPNA1-210ENST00000494339 TUBB4AP04350 444 aa22.19■■□□□ 1.14
KPNA1-210ENST00000494339 KRT19P08727 400 aa22.19■■□□□ 1.14
KPNA1-210ENST00000494339 SOX5P35711 763 aa22.19■■□□□ 1.14
KPNA1-210ENST00000494339 MYL6P60660 151 aa22.19■■□□□ 1.14
KPNA1-210ENST00000494339 PTPN14Q15678 1187 aa22.19■■□□□ 1.14
KPNA1-210ENST00000494339 GLRA4Q5JXX5 417 aa22.19■■□□□ 1.14
KPNA1-210ENST00000494339 HGSNATQ68CP4 663 aa22.19■■□□□ 1.14
KPNA1-210ENST00000494339 CD302Q8IX05 232 aa22.19■■□□□ 1.14
KPNA1-210ENST00000494339 C1orf127Q8N9H9 656 aa22.19■■□□□ 1.14
KPNA1-210ENST00000494339 USP38Q8NB14 1042 aa22.19■■□□□ 1.14
KPNA1-210ENST00000494339 C16orf45Q96MC5 204 aaPredicted RBP22.19■■□□□ 1.14
KPNA1-210ENST00000494339 APOBEC3GQ9HC16 384 aaKnown RBP22.19■■□□□ 1.14
KPNA1-210ENST00000494339 PPP2R2CQ9Y2T4 447 aa22.19■■□□□ 1.14
KPNA1-210ENST00000494339 C2CD2Q9Y426 696 aa22.19■■□□□ 1.14
KPNA1-210ENST00000494339 FOXN3O00409 490 aaPredicted RBP22.19■■□□□ 1.14
KPNA1-210ENST00000494339 MGEA5O60502 916 aa22.19■■□□□ 1.14
KPNA1-210ENST00000494339 SERPING1P05155 500 aa22.19■■□□□ 1.14
KPNA1-210ENST00000494339 GUCY2FP51841 1108 aa22.19■■□□□ 1.14
KPNA1-210ENST00000494339 MFAP3P55082 362 aa22.19■■□□□ 1.14
KPNA1-210ENST00000494339 NOP14P78316 857 aaKnown RBP22.19■■□□□ 1.14
KPNA1-210ENST00000494339 NYAP1Q6ZVC0 841 aa22.19■■□□□ 1.14
KPNA1-210ENST00000494339 LRRC8DQ7L1W4 858 aa22.19■■□□□ 1.14
KPNA1-210ENST00000494339 ZMAT2Q96NC0 199 aaKnown RBP22.19■■□□□ 1.14
KPNA1-210ENST00000494339 IMPG2Q9BZV3 1241 aa22.19■■□□□ 1.14
KPNA1-210ENST00000494339 SQORQ9Y6N5 450 aa22.19■■□□□ 1.14
KPNA1-210ENST00000494339 SELPP16109 830 aa22.18■■□□□ 1.14
KPNA1-210ENST00000494339 KLHL30Q0D2K2 578 aa22.18■■□□□ 1.14
KPNA1-210ENST00000494339 BFSP2Q13515 415 aa22.18■■□□□ 1.14
KPNA1-210ENST00000494339 ALKAL1Q6UXT8 129 aa22.18■■□□□ 1.14
KPNA1-210ENST00000494339 IRF2BP2Q7Z5L9 587 aa22.18■■□□□ 1.14
KPNA1-210ENST00000494339 ARID3AQ99856 593 aa22.18■■□□□ 1.14
KPNA1-210ENST00000494339 SIX4Q9UIU6 781 aa22.18■■□□□ 1.14
KPNA1-210ENST00000494339 EPN1Q9Y6I3 576 aaPredicted RBP22.18■■□□□ 1.14
KPNA1-210ENST00000494339 TLR3O15455 904 aaKnown RBP22.18■■□□□ 1.14
KPNA1-210ENST00000494339 ITGB3P05106 788 aa22.18■■□□□ 1.14
KPNA1-210ENST00000494339 CCDC175P0C221 793 aa22.18■■□□□ 1.14
KPNA1-210ENST00000494339 IBSPP21815 317 aaPredicted RBP22.18■■□□□ 1.14
KPNA1-210ENST00000494339 EIF4A3P38919 411 aaKnown RBP22.18■■□□□ 1.14
KPNA1-210ENST00000494339 TRIM60Q495X7 471 aa22.18■■□□□ 1.14
KPNA1-210ENST00000494339 CCDC42Q96M95 316 aa22.18■■□□□ 1.14
KPNA1-210ENST00000494339 CNTN3Q9P232 1028 aa22.18■■□□□ 1.14
KPNA1-210ENST00000494339 NUB1Q9Y5A7 615 aa22.18■■□□□ 1.14
KPNA1-210ENST00000494339 PDCD11Q14690 1871 aaKnown RBP22.17■■□□□ 1.14
KPNA1-210ENST00000494339 MEIS3P2A8K0S8 358 aa22.17■■□□□ 1.14
KPNA1-210ENST00000494339 EVI5O60447 810 aa22.17■■□□□ 1.14
KPNA1-210ENST00000494339 NDUFA10O95299 355 aa22.17■■□□□ 1.14
KPNA1-210ENST00000494339 ASS1P00966 412 aaKnown RBP22.17■■□□□ 1.14
KPNA1-210ENST00000494339 COL6A1P12109 1028 aa22.17■■□□□ 1.14
KPNA1-210ENST00000494339 TNNT1P13805 278 aa22.17■■□□□ 1.14
KPNA1-210ENST00000494339 USP8P40818 1118 aa22.17■■□□□ 1.14
KPNA1-210ENST00000494339 GCNT1Q02742 428 aa22.17■■□□□ 1.14
KPNA1-210ENST00000494339 NT5DC4Q86YG4 428 aa22.17■■□□□ 1.14
KPNA1-210ENST00000494339 ACRBPQ8NEB7 543 aa22.17■■□□□ 1.14
KPNA1-210ENST00000494339 ADAM2Q99965 735 aa22.17■■□□□ 1.14
KPNA1-210ENST00000494339 IFIH1Q9BYX4 1025 aaKnown RBP22.17■■□□□ 1.14
KPNA1-210ENST00000494339 DEF6Q9H4E7 631 aa22.17■■□□□ 1.14
KPNA1-210ENST00000494339 HAUS4Q9H6D7 363 aa22.17■■□□□ 1.14
KPNA1-210ENST00000494339 DPP3Q9NY33 737 aa22.17■■□□□ 1.14
KPNA1-210ENST00000494339 UMODL1Q5DID0 1318 aa22.17■■□□□ 1.14
KPNA1-210ENST00000494339 FERP16591 822 aa22.16■■□□□ 1.14
KPNA1-210ENST00000494339 DSC3Q14574 896 aa22.16■■□□□ 1.14
KPNA1-210ENST00000494339 SGSM1Q2NKQ1 1148 aa22.16■■□□□ 1.14
KPNA1-210ENST00000494339 ANKRD33Q7Z3H0 272 aa22.16■■□□□ 1.14
KPNA1-210ENST00000494339 CCDC170Q8IYT3 715 aa22.16■■□□□ 1.14
KPNA1-210ENST00000494339 CYLC1P35663 651 aaPredicted RBP22.16■■□□□ 1.14
KPNA1-210ENST00000494339 TLE2Q04725 743 aa22.16■■□□□ 1.14
KPNA1-210ENST00000494339 ZNF699Q32M78 642 aa22.16■■□□□ 1.14
KPNA1-210ENST00000494339 REXO1L1PQ8IX06 675 aa22.16■■□□□ 1.14
KPNA1-210ENST00000494339 CXorf38Q8TB03 319 aa22.16■■□□□ 1.14
KPNA1-210ENST00000494339 LPPQ93052 612 aa22.16■■□□□ 1.14
KPNA1-210ENST00000494339 XYLT2Q9H1B5 865 aa22.16■■□□□ 1.14
KPNA1-210ENST00000494339 DERAQ9Y315 318 aa22.16■■□□□ 1.14
KPNA1-210ENST00000494339 ADGRG1Q9Y653 693 aa22.16■■□□□ 1.14
KPNA1-210ENST00000494339 SMIM28A0A1B0GU29 152 aa22.15■■□□□ 1.14
KPNA1-210ENST00000494339 DCDC2CA8MYV0 355 aa22.15■■□□□ 1.14
KPNA1-210ENST00000494339 ITGA4P13612 1032 aa22.15■■□□□ 1.14
KPNA1-210ENST00000494339 POLR2BP30876 1174 aaKnown RBP22.15■■□□□ 1.14
KPNA1-210ENST00000494339 KIF11P52732 1056 aa22.15■■□□□ 1.14
KPNA1-210ENST00000494339 PTK2Q05397 1052 aa22.15■■□□□ 1.14
KPNA1-210ENST00000494339 HACE1Q8IYU2 909 aa22.15■■□□□ 1.14
KPNA1-210ENST00000494339 SHC3Q92529 594 aa22.15■■□□□ 1.14
KPNA1-210ENST00000494339 C18orf25Q96B23 403 aaPredicted RBP22.15■■□□□ 1.14
KPNA1-210ENST00000494339 PAWRQ96IZ0 340 aaKnown RBP22.15■■□□□ 1.14
KPNA1-210ENST00000494339 TUBGCP4Q9UGJ1 667 aa22.15■■□□□ 1.14
KPNA1-210ENST00000494339 PITPNM1O00562 1244 aa22.14■■□□□ 1.14
KPNA1-210ENST00000494339 AKR1B10O60218 316 aa22.14■■□□□ 1.14
KPNA1-210ENST00000494339 FAAP100Q0VG06 881 aa22.14■■□□□ 1.14
KPNA1-210ENST00000494339 MAPK8IP2Q13387 824 aaPredicted RBP22.14■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms