RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 KDSRQ06136 332 aa21.14■□□□□ 0.97
RNF40-203ENST00000493683 SGSM1Q2NKQ1 1148 aa21.14■□□□□ 0.97
RNF40-203ENST00000493683 CCDC92Q53HC0 331 aaPredicted RBP21.14■□□□□ 0.97
RNF40-203ENST00000493683 CATSPER3Q86XQ3 398 aa21.14■□□□□ 0.97
RNF40-203ENST00000493683 DPF2Q92785 391 aa21.14■□□□□ 0.97
RNF40-203ENST00000493683 TDRD3Q9H7E2 651 aaKnown RBP21.14■□□□□ 0.97
RNF40-203ENST00000493683 NIPSNAP3AQ9UFN0 247 aaPredicted RBP21.14■□□□□ 0.97
RNF40-203ENST00000493683 SRP72O76094 671 aaKnown RBP21.14■□□□□ 0.97
RNF40-203ENST00000493683 MAP4P27816 1152 aaKnown RBP21.14■□□□□ 0.97
RNF40-203ENST00000493683 TKFCQ3LXA3 575 aa21.14■□□□□ 0.97
RNF40-203ENST00000493683 SLC44A5Q8NCS7 719 aa21.14■□□□□ 0.97
RNF40-203ENST00000493683 SPATA33Q96N06 139 aa21.14■□□□□ 0.97
RNF40-203ENST00000493683 PCDHB8Q9UN66 801 aa21.14■□□□□ 0.97
RNF40-203ENST00000493683 PLA2R1Q13018 1463 aa21.14■□□□□ 0.97
RNF40-203ENST00000493683 A0A1B0GW55 424 aa21.14■□□□□ 0.97
RNF40-203ENST00000493683 KDM1AO60341 852 aa21.14■□□□□ 0.97
RNF40-203ENST00000493683 TBC1D4O60343 1298 aa21.14■□□□□ 0.97
RNF40-203ENST00000493683 DUX4L2P0CJ85 424 aa21.14■□□□□ 0.97
RNF40-203ENST00000493683 DUX4L3P0CJ86 424 aa21.14■□□□□ 0.97
RNF40-203ENST00000493683 DUX4L4P0CJ87 422 aa21.14■□□□□ 0.97
RNF40-203ENST00000493683 DUX4L5P0CJ88 424 aa21.14■□□□□ 0.97
RNF40-203ENST00000493683 DUX4L6P0CJ89 424 aa21.14■□□□□ 0.97
RNF40-203ENST00000493683 DUX4L7P0CJ90 424 aa21.14■□□□□ 0.97
RNF40-203ENST00000493683 SPRP35270 261 aaPredicted RBP21.14■□□□□ 0.97
RNF40-203ENST00000493683 HSPA13P48723 471 aa21.14■□□□□ 0.97
RNF40-203ENST00000493683 ZNF512BQ96KM6 892 aaPredicted RBP21.14■□□□□ 0.97
RNF40-203ENST00000493683 WRNIP1Q96S55 665 aa21.14■□□□□ 0.97
RNF40-203ENST00000493683 TBC1D23Q9NUY8 699 aa21.14■□□□□ 0.97
RNF40-203ENST00000493683 DUX4Q9UBX2 424 aa21.14■□□□□ 0.97
RNF40-203ENST00000493683 ANKMY2Q8IV38 441 aa21.13■□□□□ 0.97
RNF40-203ENST00000493683 UNC45AQ9H3U1 944 aa21.13■□□□□ 0.97
RNF40-203ENST00000493683 JPH1Q9HDC5 661 aaPredicted RBP21.13■□□□□ 0.97
RNF40-203ENST00000493683 PRKCBP05771 671 aa21.13■□□□□ 0.97
RNF40-203ENST00000493683 TEX2Q8IWB9 1127 aa21.13■□□□□ 0.97
RNF40-203ENST00000493683 MAP3K20Q9NYL2 800 aaKnown RBP21.13■□□□□ 0.97
RNF40-203ENST00000493683 ATP9BO43861 1147 aa21.13■□□□□ 0.97
RNF40-203ENST00000493683 NAA30Q147X3 362 aaPredicted RBP21.13■□□□□ 0.97
RNF40-203ENST00000493683 RABL6Q3YEC7 729 aaPredicted RBP21.13■□□□□ 0.97
RNF40-203ENST00000493683 RNF135Q8IUD6 432 aa21.13■□□□□ 0.97
RNF40-203ENST00000493683 SRBD1Q8N5C6 995 aaKnown RBP21.13■□□□□ 0.97
RNF40-203ENST00000493683 SH3KBP1Q96B97 665 aa21.13■□□□□ 0.97
RNF40-203ENST00000493683 ZBED2Q9BTP6 218 aa21.13■□□□□ 0.97
RNF40-203ENST00000493683 VPS33BQ9H267 617 aa21.13■□□□□ 0.97
RNF40-203ENST00000493683 DPYSL4O14531 572 aa21.13■□□□□ 0.97
RNF40-203ENST00000493683 MRPS35P82673 323 aaKnown RBP21.13■□□□□ 0.97
RNF40-203ENST00000493683 VEPH1Q14D04 833 aa21.13■□□□□ 0.97
RNF40-203ENST00000493683 TNIP2Q8NFZ5 429 aa21.13■□□□□ 0.97
RNF40-203ENST00000493683 RMDN1Q96DB5 314 aa21.13■□□□□ 0.97
RNF40-203ENST00000493683 MMP19Q99542 508 aa21.13■□□□□ 0.97
RNF40-203ENST00000493683 OLFML3Q9NRN5 406 aa21.13■□□□□ 0.97
RNF40-203ENST00000493683 ZNF229Q9UJW7 825 aa21.13■□□□□ 0.97
RNF40-203ENST00000493683 SNRPAP09012 282 aaKnown RBP21.12■□□□□ 0.97
RNF40-203ENST00000493683 JAMLQ86YT9 394 aa21.12■□□□□ 0.97
RNF40-203ENST00000493683 MAP3K14Q99558 947 aa21.12■□□□□ 0.97
RNF40-203ENST00000493683 CDY2AQ9Y6F7 541 aa21.12■□□□□ 0.97
RNF40-203ENST00000493683 CDY1Q9Y6F8 540 aa21.12■□□□□ 0.97
RNF40-203ENST00000493683 HNRNPCP07910 306 aaKnown RBP eCLIP21.12■□□□□ 0.97
RNF40-203ENST00000493683 S100A5P33763 92 aa21.12■□□□□ 0.97
RNF40-203ENST00000493683 KCNF1Q9H3M0 494 aa21.12■□□□□ 0.97
RNF40-203ENST00000493683 TJP2Q9UDY2 1190 aa21.12■□□□□ 0.97
RNF40-203ENST00000493683 XPO7Q9UIA9 1087 aaKnown RBP21.12■□□□□ 0.97
RNF40-203ENST00000493683 DFFAO00273 331 aa21.12■□□□□ 0.97
RNF40-203ENST00000493683 MTSS1O43312 755 aa21.12■□□□□ 0.97
RNF40-203ENST00000493683 HIST1H2AGP0C0S8 130 aaPredicted RBP21.12■□□□□ 0.97
RNF40-203ENST00000493683 HIST1H2ADP20671 130 aa21.12■□□□□ 0.97
RNF40-203ENST00000493683 LSP1P33241 339 aa21.12■□□□□ 0.97
RNF40-203ENST00000493683 HIST1H2AHQ96KK5 128 aa21.12■□□□□ 0.97
RNF40-203ENST00000493683 CHP1Q99653 195 aa21.12■□□□□ 0.97
RNF40-203ENST00000493683 HIST1H2AJQ99878 128 aa21.12■□□□□ 0.97
RNF40-203ENST00000493683 H2AFJQ9BTM1 129 aa21.12■□□□□ 0.97
RNF40-203ENST00000493683 MOV10L1Q9BXT6 1211 aaKnown RBP21.12■□□□□ 0.97
RNF40-203ENST00000493683 RSAD1Q9HA92 442 aa21.12■□□□□ 0.97
RNF40-203ENST00000493683 APOA4P06727 396 aa21.12■□□□□ 0.97
RNF40-203ENST00000493683 SULT1E1P49888 294 aa21.12■□□□□ 0.97
RNF40-203ENST00000493683 ADCK1Q86TW2 530 aa21.12■□□□□ 0.97
RNF40-203ENST00000493683 GID8Q9NWU2 228 aa21.12■□□□□ 0.97
RNF40-203ENST00000493683 SATB2Q9UPW6 733 aa21.12■□□□□ 0.97
RNF40-203ENST00000493683 MFN1Q8IWA4 741 aa21.11■□□□□ 0.97
RNF40-203ENST00000493683 SCFD2Q8WU76 684 aa21.11■□□□□ 0.97
RNF40-203ENST00000493683 EME1Q96AY2 570 aa21.11■□□□□ 0.97
RNF40-203ENST00000493683 DCUN1D1Q96GG9 259 aa21.11■□□□□ 0.97
RNF40-203ENST00000493683 SPON2Q9BUD6 331 aa21.11■□□□□ 0.97
RNF40-203ENST00000493683 NPHS2Q9NP85 383 aa21.11■□□□□ 0.97
RNF40-203ENST00000493683 GRID1Q9ULK0 1009 aa21.11■□□□□ 0.97
RNF40-203ENST00000493683 CDYLQ9Y232 598 aa21.11■□□□□ 0.97
RNF40-203ENST00000493683 FAM107AO95990 144 aa21.11■□□□□ 0.97
RNF40-203ENST00000493683 MYL2P10916 166 aa21.11■□□□□ 0.97
RNF40-203ENST00000493683 NMT1P30419 496 aaKnown RBP21.11■□□□□ 0.97
RNF40-203ENST00000493683 FOXO4P98177 505 aa21.11■□□□□ 0.97
RNF40-203ENST00000493683 TTC39BQ5VTQ0 682 aaPredicted RBP21.11■□□□□ 0.97
RNF40-203ENST00000493683 LDHDQ86WU2 507 aa21.11■□□□□ 0.97
RNF40-203ENST00000493683 FRMD8P1Q9BZ68 369 aaPredicted RBP21.11■□□□□ 0.97
RNF40-203ENST00000493683 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.11■□□□□ 0.97
RNF40-203ENST00000493683 LRRIQ3A6PVS8 624 aaPredicted RBP21.11■□□□□ 0.97
RNF40-203ENST00000493683 CACNB3P54284 484 aa21.11■□□□□ 0.97
RNF40-203ENST00000493683 MRPL28Q13084 256 aaKnown RBP21.11■□□□□ 0.97
RNF40-203ENST00000493683 PDAP1Q13442 181 aaKnown RBP21.11■□□□□ 0.97
RNF40-203ENST00000493683 CYTH1Q15438 398 aa21.11■□□□□ 0.97
RNF40-203ENST00000493683 DNAJC9Q8WXX5 260 aa21.11■□□□□ 0.97
RNF40-203ENST00000493683 GPR101Q96P66 508 aaPredicted RBP21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms