RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 MYCT1Q8N699 235 aa16■□□□□ 0.15
ATG4B-223ENST00000493618 ITFG1Q8TB96 612 aa16■□□□□ 0.15
ATG4B-223ENST00000493618 RAD54LQ92698 747 aa16■□□□□ 0.15
ATG4B-223ENST00000493618 ATOH1Q92858 354 aaPredicted RBP16■□□□□ 0.15
ATG4B-223ENST00000493618 FOXD4L1Q9NU39 408 aa16■□□□□ 0.15
ATG4B-223ENST00000493618 KCND2Q9NZV8 630 aa16■□□□□ 0.15
ATG4B-223ENST00000493618 LARSQ9P2J5 1176 aaKnown RBP16■□□□□ 0.15
ATG4B-223ENST00000493618 CA14Q9ULX7 337 aa16■□□□□ 0.15
ATG4B-223ENST00000493618 NUB1Q9Y5A7 615 aa16■□□□□ 0.15
ATG4B-223ENST00000493618 CLIC4Q9Y696 253 aa16■□□□□ 0.15
ATG4B-223ENST00000493618 K7ENM7 598 aa15.99■□□□□ 0.15
ATG4B-223ENST00000493618 CLDN3O15551 220 aa15.99■□□□□ 0.15
ATG4B-223ENST00000493618 GALR2O43603 387 aaPredicted RBP15.99■□□□□ 0.15
ATG4B-223ENST00000493618 PI15O43692 258 aa15.99■□□□□ 0.15
ATG4B-223ENST00000493618 FAM13AO94988 1023 aa15.99■□□□□ 0.15
ATG4B-223ENST00000493618 LONP1P36776 959 aaKnown RBP15.99■□□□□ 0.15
ATG4B-223ENST00000493618 MCL1Q07820 350 aa15.99■□□□□ 0.15
ATG4B-223ENST00000493618 CUL4AQ13619 759 aa15.99■□□□□ 0.15
ATG4B-223ENST00000493618 HTR4Q13639 388 aa15.99■□□□□ 0.15
ATG4B-223ENST00000493618 ZBTB41Q5SVQ8 909 aa15.99■□□□□ 0.15
ATG4B-223ENST00000493618 FAM173BQ6P4H8 233 aa15.99■□□□□ 0.15
ATG4B-223ENST00000493618 ZPBP2Q6X784 338 aa15.99■□□□□ 0.15
ATG4B-223ENST00000493618 ANKS3Q6ZW76 656 aa15.99■□□□□ 0.15
ATG4B-223ENST00000493618 USP49Q70CQ1 688 aa15.99■□□□□ 0.15
ATG4B-223ENST00000493618 KCTD17Q8N5Z5 321 aa15.99■□□□□ 0.15
ATG4B-223ENST00000493618 RPP25Q9BUL9 199 aaKnown RBP15.99■□□□□ 0.15
ATG4B-223ENST00000493618 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.99■□□□□ 0.154e-14■■□□□ 13.9
ATG4B-223ENST00000493618 DAXXQ9UER7 740 aaPredicted RBP15.99■□□□□ 0.15
ATG4B-223ENST00000493618 ODF2LQ9ULJ1 636 aa15.99■□□□□ 0.15
ATG4B-223ENST00000493618 BACE2Q9Y5Z0 518 aa15.99■□□□□ 0.15
ATG4B-223ENST00000493618 NUMBLQ9Y6R0 609 aa15.99■□□□□ 0.15
ATG4B-223ENST00000493618 MIA3Q5JRA6 1907 aa15.99■□□□□ 0.15
ATG4B-223ENST00000493618 TSC2P49815 1807 aa15.98■□□□□ 0.15
ATG4B-223ENST00000493618 STK25O00506 426 aa15.98■□□□□ 0.15
ATG4B-223ENST00000493618 SLC26A4O43511 780 aa15.98■□□□□ 0.15
ATG4B-223ENST00000493618 XYLBO75191 536 aa15.98■□□□□ 0.15
ATG4B-223ENST00000493618 MARCKSP29966 332 aaPredicted RBP15.98■□□□□ 0.15
ATG4B-223ENST00000493618 NMT1P30419 496 aaKnown RBP15.98■□□□□ 0.15
ATG4B-223ENST00000493618 MCM4P33991 863 aa15.98■□□□□ 0.15
ATG4B-223ENST00000493618 LIG4P49917 911 aa15.98■□□□□ 0.15
ATG4B-223ENST00000493618 GUCY2FP51841 1108 aa15.98■□□□□ 0.15
ATG4B-223ENST00000493618 ROR1Q01973 937 aa15.98■□□□□ 0.15
ATG4B-223ENST00000493618 CEBPZQ03701 1054 aaKnown RBP15.98■□□□□ 0.15
ATG4B-223ENST00000493618 PARM1Q6UWI2 310 aa15.98■□□□□ 0.15
ATG4B-223ENST00000493618 ING5Q8WYH8 240 aa15.98■□□□□ 0.15
ATG4B-223ENST00000493618 EPSTI1Q96J88 318 aa15.98■□□□□ 0.15
ATG4B-223ENST00000493618 DNMT3BQ9UBC3 853 aaKnown RBP15.98■□□□□ 0.15
ATG4B-223ENST00000493618 KCNG1Q9UIX4 513 aa15.98■□□□□ 0.15
ATG4B-223ENST00000493618 TBX20Q9UMR3 447 aa15.98■□□□□ 0.15
ATG4B-223ENST00000493618 WDR27A2RRH5 827 aa15.97■□□□□ 0.15
ATG4B-223ENST00000493618 KRBA1A5PL33 1030 aa15.97■□□□□ 0.15
ATG4B-223ENST00000493618 ANHXE9PGG2 379 aa15.97■□□□□ 0.15
ATG4B-223ENST00000493618 H0YCG3 227 aa15.97■□□□□ 0.15
ATG4B-223ENST00000493618 HNRNPDLO14979 420 aaKnown RBP15.97■□□□□ 0.15
ATG4B-223ENST00000493618 BMP15O95972 392 aa15.97■□□□□ 0.15
ATG4B-223ENST00000493618 SRFP11831 508 aa15.97■□□□□ 0.15
ATG4B-223ENST00000493618 HOXA9P31269 272 aa15.97■□□□□ 0.15
ATG4B-223ENST00000493618 RPL9P32969 192 aaKnown RBP15.97■□□□□ 0.15
ATG4B-223ENST00000493618 CLCN5P51795 746 aa15.97■□□□□ 0.15
ATG4B-223ENST00000493618 GPR152Q8TDT2 470 aa15.97■□□□□ 0.15
ATG4B-223ENST00000493618 FGF13Q92913 245 aa15.97■□□□□ 0.15
ATG4B-223ENST00000493618 FGF14Q92915 247 aa15.97■□□□□ 0.15
ATG4B-223ENST00000493618 FAM212AQ96EL1 285 aa15.97■□□□□ 0.15
ATG4B-223ENST00000493618 KIF12Q96FN5 646 aa15.97■□□□□ 0.15
ATG4B-223ENST00000493618 PARVGQ9HBI0 331 aa15.97■□□□□ 0.15
ATG4B-223ENST00000493618 CDH7Q9ULB5 785 aa15.97■□□□□ 0.15
ATG4B-223ENST00000493618 USP34Q70CQ2 3546 aa15.97■□□□□ 0.15
ATG4B-223ENST00000493618 LACTBL1A8MY62 500 aa15.96■□□□□ 0.15
ATG4B-223ENST00000493618 PRRG1O14668 218 aa15.96■□□□□ 0.15
ATG4B-223ENST00000493618 SYN3O14994 580 aa15.96■□□□□ 0.15
ATG4B-223ENST00000493618 TRAK2O60296 914 aa15.96■□□□□ 0.15
ATG4B-223ENST00000493618 TBCAO75347 108 aaKnown RBP15.96■□□□□ 0.15
ATG4B-223ENST00000493618 CLTAP09496 248 aa15.96■□□□□ 0.15
ATG4B-223ENST00000493618 AOC1P19801 751 aa15.96■□□□□ 0.15
ATG4B-223ENST00000493618 RFX1P22670 979 aa15.96■□□□□ 0.15
ATG4B-223ENST00000493618 ZNF131P52739 623 aa15.96■□□□□ 0.15
ATG4B-223ENST00000493618 PPP2R3AQ06190 1150 aa15.96■□□□□ 0.15
ATG4B-223ENST00000493618 RESTQ13127 1097 aa15.96■□□□□ 0.15
ATG4B-223ENST00000493618 PTPAQ15257 358 aa15.96■□□□□ 0.15
ATG4B-223ENST00000493618 UVSSAQ2YD98 709 aa15.96■□□□□ 0.15
ATG4B-223ENST00000493618 CTXN3Q4LDR2 81 aa15.96■□□□□ 0.15
ATG4B-223ENST00000493618 PABPC1LQ4VXU2 614 aaKnown RBP15.96■□□□□ 0.15
ATG4B-223ENST00000493618 LARP4BQ92615 738 aaKnown RBP15.96■□□□□ 0.15
ATG4B-223ENST00000493618 DDX12PQ92771 950 aa15.96■□□□□ 0.15
ATG4B-223ENST00000493618 NXPE3Q969Y0 559 aa15.96■□□□□ 0.15
ATG4B-223ENST00000493618 SUSD3Q96L08 255 aa15.96■□□□□ 0.15
ATG4B-223ENST00000493618 CLIC6Q96NY7 704 aa15.96■□□□□ 0.15
ATG4B-223ENST00000493618 WNT16Q9UBV4 365 aa15.96■□□□□ 0.15
ATG4B-223ENST00000493618 FBXL5Q9UKA1 691 aa15.96■□□□□ 0.15
ATG4B-223ENST00000493618 TTC26A0AVF1 554 aa15.95■□□□□ 0.14
ATG4B-223ENST00000493618 TISP43B9A030 160 aa15.95■□□□□ 0.14
ATG4B-223ENST00000493618 H7C4K7 107 aa15.95■□□□□ 0.14
ATG4B-223ENST00000493618 TBC1D4O60343 1298 aa15.95■□□□□ 0.14
ATG4B-223ENST00000493618 SEC24AO95486 1093 aa15.95■□□□□ 0.14
ATG4B-223ENST00000493618 LRG1P02750 347 aa15.95■□□□□ 0.14
ATG4B-223ENST00000493618 SYT1P21579 422 aa15.95■□□□□ 0.14
ATG4B-223ENST00000493618 ELF1P32519 619 aa15.95■□□□□ 0.14
ATG4B-223ENST00000493618 MRPL58Q14197 206 aaKnown RBP15.95■□□□□ 0.14
ATG4B-223ENST00000493618 ENOX2Q16206 610 aaKnown RBP15.95■□□□□ 0.14
ATG4B-223ENST00000493618 ZC2HC1CQ53FD0 456 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms