RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 AGPAT5Q9NUQ2 364 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 MTRF1LQ9UGC7 380 aaKnown RBP7.25□□□□□ -1.25
VPS13B-205ENST00000493587 SYCE1LA8MT33 242 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 RSPH10B2B2RC85 870 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 ERVV-1B6SEH8 477 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 KIF28PB7ZC32 967 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 KRIT1O00522 736 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 GNPATO15228 680 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 ACSL4O60488 711 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 RSPH10BP0C881 870 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 GFAPP14136 432 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 GNA11P29992 359 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 ETFBP38117 255 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 AP2B1P63010 937 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 RASGRF1Q13972 1273 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 BBS9Q3SYG4 887 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 TMCO4Q5TGY1 634 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 SIGIRRQ6IA17 410 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 C4orf22Q6V702 233 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 C3orf62Q6ZUJ4 267 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 TMC4Q7Z404 712 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 VPS37DQ86XT2 251 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 TOR1AIP2Q8NFQ8 470 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 THAP11Q96EK4 314 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 CCDC138Q96M89 665 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 UQCC2Q9BRT2 126 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 DCUN1D5Q9BTE7 237 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 MKNK1Q9BUB5 465 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 LIN28AQ9H9Z2 209 aaKnown RBP7.25□□□□□ -1.25
VPS13B-205ENST00000493587 KIAA1522Q9P206 1035 aaPredicted RBP7.25□□□□□ -1.25
VPS13B-205ENST00000493587 STX18Q9P2W9 335 aaKnown RBP7.25□□□□□ -1.25
VPS13B-205ENST00000493587 AMACRQ9UHK6 382 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 ATPIF1Q9UII2 106 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 TLL2Q9Y6L7 1015 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 MROH7Q68CQ1 1323 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 K7EPI3 171 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 SNX2O60749 519 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 SPAG7O75391 227 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 USP1O94782 785 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 FARP2O94887 1054 aaPredicted RBP7.25□□□□□ -1.25
VPS13B-205ENST00000493587 GJB6O95452 261 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 GAS8O95995 478 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 AGTP01019 485 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 NR4A1P22736 598 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 GTF2H1P32780 548 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 ETV3P41162 512 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 PLTPP55058 493 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 C21orf59P57076 290 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 KCNA1Q09470 495 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 PDAP1Q13442 181 aaKnown RBP7.25□□□□□ -1.25
VPS13B-205ENST00000493587 GIT2Q14161 759 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 SF3B4Q15427 424 aaKnown RBP eCLIP7.25□□□□□ -1.25
VPS13B-205ENST00000493587 TGFBIQ15582 683 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 CNGA2Q16280 664 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 NADK2Q4G0N4 442 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 EGFLAMQ63HQ2 1017 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 CCDC62Q6P9F0 684 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 PEX26Q7Z412 305 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 TMC3Q7Z5M5 1100 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 AMIGO3Q86WK7 504 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 NATD1Q8N6N6 113 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 TRIML2Q8N7C3 387 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 TBC1D16Q8TBP0 767 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 TLCD1Q96CP7 247 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 TLR10Q9BXR5 811 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 CALN1Q9BXU9 219 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 NEUROG2Q9H2A3 272 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 KRT82Q9NSB4 513 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 HEMK1Q9Y5R4 338 aaPredicted RBP7.25□□□□□ -1.25
VPS13B-205ENST00000493587 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.25□□□□□ -1.25
VPS13B-205ENST00000493587 SIGLEC16A6NMB1 481 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 A8MU76 341 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 TAF4O00268 1085 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 ZNF862O60290 1169 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 ICMTO60725 284 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 GABBR2O75899 941 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 KRT10P13645 584 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 GLULP15104 373 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 ECE1P42892 770 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 MTIF2P46199 727 aaKnown RBP7.24□□□□□ -1.25
VPS13B-205ENST00000493587 PAK1Q13153 545 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 IYDQ6PHW0 289 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 ACAD11Q709F0 780 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 TAS2R42Q7RTR8 314 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 SFR1Q86XK3 245 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 DTX3Q8N9I9 347 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 BBOF1Q8ND07 529 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 FLCNQ8NFG4 579 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 EPS8L3Q8TE67 593 aaKnown RBP7.24□□□□□ -1.25
VPS13B-205ENST00000493587 SNX29Q8TEQ0 813 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 TRIM47Q96LD4 638 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 PSKH2Q96QS6 385 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 MED15Q96RN5 788 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 ALG1Q9BT22 464 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 HAUS8Q9BT25 410 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.24□□□□□ -1.25
VPS13B-205ENST00000493587 ANKRD2Q9GZV1 360 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 DISC1Q9NRI5 854 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 NDFIP2Q9NV92 336 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 UCKL1Q9NWZ5 548 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms