RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 C11orf49Q9H6J7 331 aa5.38□□□□□ -1.55
CLIP4-212ENST00000493551 IFT57Q9NWB7 429 aa5.38□□□□□ -1.55
CLIP4-212ENST00000493551 ZHX2Q9Y6X8 837 aa5.38□□□□□ -1.55
CLIP4-212ENST00000493551 A0A1W2PPC1 479 aa5.37□□□□□ -1.55
CLIP4-212ENST00000493551 CSF1RP07333 972 aa5.37□□□□□ -1.55
CLIP4-212ENST00000493551 ZNF853P0CG23 659 aa5.37□□□□□ -1.55
CLIP4-212ENST00000493551 CYP2B6P20813 491 aa5.37□□□□□ -1.55
CLIP4-212ENST00000493551 ZEB1P37275 1124 aaPredicted RBP5.37□□□□□ -1.55
CLIP4-212ENST00000493551 MMP14P50281 582 aa5.37□□□□□ -1.55
CLIP4-212ENST00000493551 KRTAP10-9P60411 292 aa5.37□□□□□ -1.55
CLIP4-212ENST00000493551 FKBP1AP62942 108 aaKnown RBP5.37□□□□□ -1.55
CLIP4-212ENST00000493551 PPATQ06203 517 aa5.37□□□□□ -1.55
CLIP4-212ENST00000493551 SPIRE1Q08AE8 756 aa5.37□□□□□ -1.55
CLIP4-212ENST00000493551 RRP1BQ14684 758 aaKnown RBP5.37□□□□□ -1.55
CLIP4-212ENST00000493551 LRRC26Q2I0M4 334 aa5.37□□□□□ -1.55
CLIP4-212ENST00000493551 WDR72Q3MJ13 1102 aa5.37□□□□□ -1.55
CLIP4-212ENST00000493551 SLC35F1Q5T1Q4 408 aa5.37□□□□□ -1.55
CLIP4-212ENST00000493551 TREML2Q5T2D2 321 aa5.37□□□□□ -1.55
CLIP4-212ENST00000493551 SLC4A10Q6U841 1118 aa5.37□□□□□ -1.55
CLIP4-212ENST00000493551 MAFAQ8NHW3 353 aaPredicted RBP5.37□□□□□ -1.55
CLIP4-212ENST00000493551 KLHDC4Q8TBB5 520 aa5.37□□□□□ -1.55
CLIP4-212ENST00000493551 CPLX3Q8WVH0 158 aa5.37□□□□□ -1.55
CLIP4-212ENST00000493551 DNAAF4Q8WXU2 420 aa5.37□□□□□ -1.55
CLIP4-212ENST00000493551 PPM1EQ8WY54 764 aa5.37□□□□□ -1.55
CLIP4-212ENST00000493551 KIAA1683Q9H0B3 1180 aa5.37□□□□□ -1.55
CLIP4-212ENST00000493551 MYH16Q9H6N6 1097 aa5.37□□□□□ -1.55
CLIP4-212ENST00000493551 SLC39A2Q9NP94 309 aa5.37□□□□□ -1.55
CLIP4-212ENST00000493551 GPR27Q9NS67 375 aa5.37□□□□□ -1.55
CLIP4-212ENST00000493551 FBXO10Q9UK96 956 aa5.37□□□□□ -1.55
CLIP4-212ENST00000493551 TELO2Q9Y4R8 837 aa5.37□□□□□ -1.55
CLIP4-212ENST00000493551 FAM205AQ6ZU69 1335 aa5.37□□□□□ -1.55
CLIP4-212ENST00000493551 DDX60LQ5H9U9 1706 aaKnown RBP5.37□□□□□ -1.55
CLIP4-212ENST00000493551 COL6A3P12111 3177 aa5.37□□□□□ -1.55
CLIP4-212ENST00000493551 MASP2O00187 686 aa5.36□□□□□ -1.55
CLIP4-212ENST00000493551 LMNAP02545 664 aaKnown RBP5.36□□□□□ -1.55
CLIP4-212ENST00000493551 GJA4P35212 333 aa5.36□□□□□ -1.55
CLIP4-212ENST00000493551 EPHA5P54756 1037 aa5.36□□□□□ -1.55
CLIP4-212ENST00000493551 DDX10Q13206 875 aaKnown RBP5.36□□□□□ -1.55
CLIP4-212ENST00000493551 PICALMQ13492 652 aa5.36□□□□□ -1.55
CLIP4-212ENST00000493551 TWISTNBQ3B726 338 aaPredicted RBP5.36□□□□□ -1.55
CLIP4-212ENST00000493551 LRRC24Q50LG9 513 aa5.36□□□□□ -1.55
CLIP4-212ENST00000493551 METTL24Q5JXM2 366 aa5.36□□□□□ -1.55
CLIP4-212ENST00000493551 APOBEC3HQ6NTF7 200 aaKnown RBP5.36□□□□□ -1.55
CLIP4-212ENST00000493551 CDC42EP5Q6NZY7 148 aa5.36□□□□□ -1.55
CLIP4-212ENST00000493551 C15orf52Q6ZUT6 534 aaKnown RBP5.36□□□□□ -1.55
CLIP4-212ENST00000493551 ERICH6Q7L0X2 663 aa5.36□□□□□ -1.55
CLIP4-212ENST00000493551 GPR135Q8IZ08 494 aa5.36□□□□□ -1.55
CLIP4-212ENST00000493551 ZNF654Q8IZM8 581 aa5.36□□□□□ -1.55
CLIP4-212ENST00000493551 FAM169BQ8N8A8 192 aa5.36□□□□□ -1.55
CLIP4-212ENST00000493551 COA7Q96BR5 231 aa5.36□□□□□ -1.55
CLIP4-212ENST00000493551 GPRASP2Q96D09 838 aa5.36□□□□□ -1.55
CLIP4-212ENST00000493551 SUCLG2Q96I99 432 aa5.36□□□□□ -1.55
CLIP4-212ENST00000493551 CDX2Q99626 313 aaPredicted RBP5.36□□□□□ -1.55
CLIP4-212ENST00000493551 GPRC5BQ9NZH0 403 aa5.36□□□□□ -1.55
CLIP4-212ENST00000493551 HECAQ9UBI9 543 aaPredicted RBP5.36□□□□□ -1.55
CLIP4-212ENST00000493551 PPARGC1AQ9UBK2 798 aaKnown RBP5.36□□□□□ -1.55
CLIP4-212ENST00000493551 PFASO15067 1338 aa5.36□□□□□ -1.55
CLIP4-212ENST00000493551 MGAMO43451 1857 aa5.36□□□□□ -1.55
CLIP4-212ENST00000493551 AK9Q5TCS8 1911 aa5.35□□□□□ -1.55
CLIP4-212ENST00000493551 MYBBP1AQ9BQG0 1328 aaKnown RBP5.35□□□□□ -1.55
CLIP4-212ENST00000493551 ACOT7O00154 380 aa5.35□□□□□ -1.55
CLIP4-212ENST00000493551 GNAT1P11488 350 aa5.35□□□□□ -1.55
CLIP4-212ENST00000493551 PROZP22891 400 aa5.35□□□□□ -1.55
CLIP4-212ENST00000493551 CCND3P30281 292 aaPredicted RBP5.35□□□□□ -1.55
CLIP4-212ENST00000493551 CCL14Q16627 93 aa5.35□□□□□ -1.55
CLIP4-212ENST00000493551 LRIT3Q3SXY7 679 aa5.35□□□□□ -1.55
CLIP4-212ENST00000493551 ANO1Q5XXA6 986 aa5.35□□□□□ -1.55
CLIP4-212ENST00000493551 KCTD1Q719H9 257 aa5.35□□□□□ -1.55
CLIP4-212ENST00000493551 LINS1Q8NG48 757 aa5.35□□□□□ -1.55
CLIP4-212ENST00000493551 TRIB2Q92519 343 aa5.35□□□□□ -1.55
CLIP4-212ENST00000493551 LBHD1Q9BQE6 289 aaPredicted RBP5.35□□□□□ -1.55
CLIP4-212ENST00000493551 BACH2Q9BYV9 841 aa5.35□□□□□ -1.55
CLIP4-212ENST00000493551 ZCCHC17Q9NP64 241 aaKnown RBP5.35□□□□□ -1.55
CLIP4-212ENST00000493551 C9orf78Q9NZ63 289 aaPredicted RBP5.35□□□□□ -1.55
CLIP4-212ENST00000493551 DSEQ9UL01 958 aa5.35□□□□□ -1.55
CLIP4-212ENST00000493551 PMS2P1A4D2B8 440 aa5.34□□□□□ -1.55
CLIP4-212ENST00000493551 GRM8O00222 908 aa5.34□□□□□ -1.55
CLIP4-212ENST00000493551 COL6A2P12110 1019 aa5.34□□□□□ -1.55
CLIP4-212ENST00000493551 FOSL2P15408 326 aa5.34□□□□□ -1.55
CLIP4-212ENST00000493551 PDE6AP16499 860 aa5.34□□□□□ -1.55
CLIP4-212ENST00000493551 GRK2P25098 689 aa5.34□□□□□ -1.55
CLIP4-212ENST00000493551 PRDX5P30044 214 aa5.34□□□□□ -1.55
CLIP4-212ENST00000493551 PTGS2P35354 604 aa5.34□□□□□ -1.55
CLIP4-212ENST00000493551 GRK3P35626 688 aa5.34□□□□□ -1.55
CLIP4-212ENST00000493551 NASPP49321 788 aaPredicted RBP5.34□□□□□ -1.55
CLIP4-212ENST00000493551 RGS3P49796 1198 aa5.34□□□□□ -1.55
CLIP4-212ENST00000493551 KCNQ1P51787 676 aa5.34□□□□□ -1.55
CLIP4-212ENST00000493551 HMGCS2P54868 508 aa5.34□□□□□ -1.55
CLIP4-212ENST00000493551 C21orf58P58505 322 aa5.34□□□□□ -1.55
CLIP4-212ENST00000493551 DBPQ10586 325 aaPredicted RBP5.34□□□□□ -1.55
CLIP4-212ENST00000493551 MAP4K2Q12851 820 aa5.34□□□□□ -1.55
CLIP4-212ENST00000493551 UBE4AQ14139 1066 aa5.34□□□□□ -1.55
CLIP4-212ENST00000493551 RALBP1Q15311 655 aa5.34□□□□□ -1.55
CLIP4-212ENST00000493551 CAVIN4Q5BKX8 364 aa5.34□□□□□ -1.55
CLIP4-212ENST00000493551 C9orf50Q5SZB4 431 aa5.34□□□□□ -1.55
CLIP4-212ENST00000493551 WDR78Q5VTH9 848 aa5.34□□□□□ -1.55
CLIP4-212ENST00000493551 SPTY2D1Q68D10 685 aaPredicted RBP5.34□□□□□ -1.55
CLIP4-212ENST00000493551 SYCE2Q6PIF2 218 aa5.34□□□□□ -1.55
CLIP4-212ENST00000493551 LARP4Q71RC2 724 aaKnown RBP eCLIP5.34□□□□□ -1.55
CLIP4-212ENST00000493551 FASTKD5Q7L8L6 764 aaKnown RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms