RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 K7ENM7 598 aa12.53□□□□□ -0.4
LRTM1-202ENST00000493075 HNRNPDLO14979 420 aaKnown RBP12.53□□□□□ -0.4
LRTM1-202ENST00000493075 OGTO15294 1046 aa12.53□□□□□ -0.4
LRTM1-202ENST00000493075 ADAM12O43184 909 aa12.53□□□□□ -0.4
LRTM1-202ENST00000493075 TBC1D4O60343 1298 aa12.53□□□□□ -0.4
LRTM1-202ENST00000493075 ASGR2P07307 311 aa12.53□□□□□ -0.4
LRTM1-202ENST00000493075 MYBP10242 640 aa12.53□□□□□ -0.4
LRTM1-202ENST00000493075 TKTP29401 623 aaKnown RBP12.53□□□□□ -0.4
LRTM1-202ENST00000493075 LRPAP1P30533 357 aa12.53□□□□□ -0.4
LRTM1-202ENST00000493075 MATR3P43243 847 aaKnown RBP eCLIP12.53□□□□□ -0.4
LRTM1-202ENST00000493075 BRCC3P46736 316 aa12.53□□□□□ -0.4
LRTM1-202ENST00000493075 NASPP49321 788 aaPredicted RBP12.53□□□□□ -0.4
LRTM1-202ENST00000493075 POU5F1Q01860 360 aaKnown RBP12.53□□□□□ -0.4
LRTM1-202ENST00000493075 TDGQ13569 410 aa12.53□□□□□ -0.4
LRTM1-202ENST00000493075 MRPL58Q14197 206 aaKnown RBP12.53□□□□□ -0.4
LRTM1-202ENST00000493075 SEZ6Q53EL9 994 aa12.53□□□□□ -0.4
LRTM1-202ENST00000493075 SLC8B1Q6J4K2 584 aa12.53□□□□□ -0.4
LRTM1-202ENST00000493075 SV2BQ7L1I2 683 aa12.53□□□□□ -0.4
LRTM1-202ENST00000493075 ZNF720Q7Z2F6 126 aa12.53□□□□□ -0.4
LRTM1-202ENST00000493075 MAP4K3Q8IVH8 894 aa12.53□□□□□ -0.4
LRTM1-202ENST00000493075 SUGP1Q8IWZ8 645 aaKnown RBP12.53□□□□□ -0.4
LRTM1-202ENST00000493075 CD302Q8IX05 232 aa12.53□□□□□ -0.4
LRTM1-202ENST00000493075 C18orf25Q96B23 403 aaPredicted RBP12.53□□□□□ -0.4
LRTM1-202ENST00000493075 SUSD3Q96L08 255 aa12.53□□□□□ -0.4
LRTM1-202ENST00000493075 CLIC6Q96NY7 704 aa12.53□□□□□ -0.4
LRTM1-202ENST00000493075 USP28Q96RU2 1077 aa12.53□□□□□ -0.4
LRTM1-202ENST00000493075 ZHX3Q9H4I2 956 aa12.53□□□□□ -0.4
LRTM1-202ENST00000493075 KCNK12Q9HB15 430 aa12.53□□□□□ -0.4
LRTM1-202ENST00000493075 SEL1LQ9UBV2 794 aa12.53□□□□□ -0.4
LRTM1-202ENST00000493075 NUB1Q9Y5A7 615 aa12.53□□□□□ -0.4
LRTM1-202ENST00000493075 ZFP37Q9Y6Q3 630 aaPredicted RBP12.53□□□□□ -0.4
LRTM1-202ENST00000493075 I3L4J1 428 aa12.52□□□□□ -0.41
LRTM1-202ENST00000493075 XPOTO43592 962 aaKnown RBP12.52□□□□□ -0.41
LRTM1-202ENST00000493075 FAM189A1O60320 539 aa12.52□□□□□ -0.41
LRTM1-202ENST00000493075 N4BP1O75113 896 aaKnown RBP12.52□□□□□ -0.41
LRTM1-202ENST00000493075 XYLBO75191 536 aa12.52□□□□□ -0.41
LRTM1-202ENST00000493075 C8AP07357 584 aa12.52□□□□□ -0.41
LRTM1-202ENST00000493075 GAP43P17677 238 aa12.52□□□□□ -0.41
LRTM1-202ENST00000493075 PAX3P23760 479 aa12.52□□□□□ -0.41
LRTM1-202ENST00000493075 GBP2P32456 591 aaPredicted RBP12.52□□□□□ -0.41
LRTM1-202ENST00000493075 NUBP1P53384 320 aa12.52□□□□□ -0.41
LRTM1-202ENST00000493075 CEBPZQ03701 1054 aaKnown RBP12.52□□□□□ -0.41
LRTM1-202ENST00000493075 PPM1LQ5SGD2 360 aa12.52□□□□□ -0.41
LRTM1-202ENST00000493075 VARS2Q5ST30 1063 aaKnown RBP12.52□□□□□ -0.41
LRTM1-202ENST00000493075 AXDND1Q5T1B0 1012 aaPredicted RBP12.52□□□□□ -0.41
LRTM1-202ENST00000493075 SLFN12LQ6IEE8 588 aa12.52□□□□□ -0.41
LRTM1-202ENST00000493075 RSPO2Q6UXX9 243 aaPredicted RBP12.52□□□□□ -0.41
LRTM1-202ENST00000493075 CCDC73Q6ZRK6 1079 aa12.52□□□□□ -0.41
LRTM1-202ENST00000493075 APPL2Q8NEU8 664 aa12.52□□□□□ -0.41
LRTM1-202ENST00000493075 ZNF461Q8TAF7 563 aa12.52□□□□□ -0.41
LRTM1-202ENST00000493075 DDX12PQ92771 950 aa12.52□□□□□ -0.41
LRTM1-202ENST00000493075 HVCN1Q96D96 273 aa12.52□□□□□ -0.41
LRTM1-202ENST00000493075 RPF1Q9H9Y2 349 aaKnown RBP12.52□□□□□ -0.41
LRTM1-202ENST00000493075 MAFFQ9ULX9 164 aa12.52□□□□□ -0.41
LRTM1-202ENST00000493075 UBQLN1Q9UMX0 589 aaKnown RBP12.52□□□□□ -0.41
LRTM1-202ENST00000493075 CDY1Q9Y6F8 540 aa12.52□□□□□ -0.41
LRTM1-202ENST00000493075 STYXL1Q9Y6J8 313 aa12.52□□□□□ -0.41
LRTM1-202ENST00000493075 LACTBL1A8MY62 500 aa12.51□□□□□ -0.41
LRTM1-202ENST00000493075 PPP6R2O75170 966 aa12.51□□□□□ -0.41
LRTM1-202ENST00000493075 ABLIM3O94929 683 aa12.51□□□□□ -0.41
LRTM1-202ENST00000493075 CXCL8P10145 99 aa12.51□□□□□ -0.41
LRTM1-202ENST00000493075 LAMP2P13473 410 aa12.51□□□□□ -0.41
LRTM1-202ENST00000493075 NMT1P30419 496 aaKnown RBP12.51□□□□□ -0.41
LRTM1-202ENST00000493075 AVPR2P30518 371 aa12.51□□□□□ -0.41
LRTM1-202ENST00000493075 PPP2R3AQ06190 1150 aa12.51□□□□□ -0.41
LRTM1-202ENST00000493075 ENOX2Q16206 610 aaKnown RBP12.51□□□□□ -0.41
LRTM1-202ENST00000493075 LINC00301Q8NCQ3 95 aa12.51□□□□□ -0.41
LRTM1-202ENST00000493075 DNAJC19Q96DA6 116 aa12.51□□□□□ -0.41
LRTM1-202ENST00000493075 ZNF396Q96N95 335 aaPredicted RBP12.51□□□□□ -0.41
LRTM1-202ENST00000493075 MYADMQ96S97 322 aa12.51□□□□□ -0.41
LRTM1-202ENST00000493075 MSTO1Q9BUK6 570 aa12.51□□□□□ -0.41
LRTM1-202ENST00000493075 STRA6Q9BX79 667 aa12.51□□□□□ -0.41
LRTM1-202ENST00000493075 OXCT2Q9BYC2 517 aaPredicted RBP12.51□□□□□ -0.41
LRTM1-202ENST00000493075 CPSF3Q9UKF6 684 aaKnown RBP12.51□□□□□ -0.41
LRTM1-202ENST00000493075 DERAQ9Y315 318 aa12.51□□□□□ -0.41
LRTM1-202ENST00000493075 TDRD15B5MCY1 1934 aaKnown RBP12.5□□□□□ -0.41
LRTM1-202ENST00000493075 MYMKA6NI61 221 aa12.5□□□□□ -0.41
LRTM1-202ENST00000493075 M0QZQ0 153 aa12.5□□□□□ -0.41
LRTM1-202ENST00000493075 PPP1R37O75864 691 aa12.5□□□□□ -0.41
LRTM1-202ENST00000493075 ATF2P15336 505 aa12.5□□□□□ -0.41
LRTM1-202ENST00000493075 FSHRP23945 695 aa12.5□□□□□ -0.41
LRTM1-202ENST00000493075 TNFSF9P41273 254 aa12.5□□□□□ -0.41
LRTM1-202ENST00000493075 AARSP49588 968 aaKnown RBP eCLIP12.5□□□□□ -0.41
LRTM1-202ENST00000493075 POSTNQ15063 836 aa12.5□□□□□ -0.41
LRTM1-202ENST00000493075 STK38Q15208 465 aa12.5□□□□□ -0.41
LRTM1-202ENST00000493075 ZC2HC1CQ53FD0 456 aaPredicted RBP12.5□□□□□ -0.41
LRTM1-202ENST00000493075 SPATA1Q5VX52 437 aa12.5□□□□□ -0.41
LRTM1-202ENST00000493075 TPGS2Q68CL5 300 aa12.5□□□□□ -0.41
LRTM1-202ENST00000493075 SLC39A4Q6P5W5 647 aa12.5□□□□□ -0.41
LRTM1-202ENST00000493075 DYMQ7RTS9 669 aa12.5□□□□□ -0.41
LRTM1-202ENST00000493075 GRASPQ7Z6J2 395 aaPredicted RBP12.5□□□□□ -0.41
LRTM1-202ENST00000493075 SLC44A3Q8N4M1 653 aa12.5□□□□□ -0.41
LRTM1-202ENST00000493075 SLC7A14Q8TBB6 771 aa12.5□□□□□ -0.41
LRTM1-202ENST00000493075 KIF12Q96FN5 646 aa12.5□□□□□ -0.41
LRTM1-202ENST00000493075 ASB7Q9H672 318 aa12.5□□□□□ -0.41
LRTM1-202ENST00000493075 OLFML3Q9NRN5 406 aa12.5□□□□□ -0.41
LRTM1-202ENST00000493075 TUBGCP4Q9UGJ1 667 aa12.5□□□□□ -0.41
LRTM1-202ENST00000493075 PCDHB8Q9UN66 801 aa12.5□□□□□ -0.41
LRTM1-202ENST00000493075 DUSP12Q9UNI6 340 aa12.5□□□□□ -0.41
LRTM1-202ENST00000493075 TECTAO75443 2155 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms