RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 SLC35F1Q5T1Q4 408 aa7.86□□□□□ -1.15
TPR-208ENST00000492973 ACBD5Q5T8D3 534 aaPredicted RBP7.86□□□□□ -1.15
TPR-208ENST00000492973 E4F1Q66K89 784 aaPredicted RBP7.86□□□□□ -1.15
TPR-208ENST00000492973 SNRNP48Q6IEG0 339 aaKnown RBP7.86□□□□□ -1.15
TPR-208ENST00000492973 DENND5AQ6IQ26 1287 aa7.86□□□□□ -1.15
TPR-208ENST00000492973 RIOX2Q8IUF8 465 aa7.86□□□□□ -1.15
TPR-208ENST00000492973 CCDC103Q8IW40 242 aa7.86□□□□□ -1.15
TPR-208ENST00000492973 CPXCR1Q8N123 301 aa7.86□□□□□ -1.15
TPR-208ENST00000492973 TMEM145Q8NBT3 493 aa7.86□□□□□ -1.15
TPR-208ENST00000492973 FBXO15Q8NCQ5 510 aaPredicted RBP7.86□□□□□ -1.15
TPR-208ENST00000492973 SHCBP1Q8NEM2 672 aa7.86□□□□□ -1.15
TPR-208ENST00000492973 SMARCC2Q8TAQ2 1214 aa7.86□□□□□ -1.15
TPR-208ENST00000492973 DEPDC7Q96QD5 511 aa7.86□□□□□ -1.15
TPR-208ENST00000492973 PIGSQ96S52 555 aa7.86□□□□□ -1.15
TPR-208ENST00000492973 LZTS2Q9BRK4 669 aa7.86□□□□□ -1.15
TPR-208ENST00000492973 LLPHQ9BRT6 129 aaKnown RBP7.86□□□□□ -1.15
TPR-208ENST00000492973 SPZ1Q9BXG8 430 aa7.86□□□□□ -1.15
TPR-208ENST00000492973 TEX13BQ9BXU2 312 aa7.86□□□□□ -1.15
TPR-208ENST00000492973 NAP1L2Q9ULW6 460 aaPredicted RBP7.86□□□□□ -1.15
TPR-208ENST00000492973 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.86□□□□□ -1.15
TPR-208ENST00000492973 A0A1W2PQ27 194 aa7.85□□□□□ -1.15
TPR-208ENST00000492973 A0A1W2PQ64 194 aa7.85□□□□□ -1.15
TPR-208ENST00000492973 A0A1W2PQC6 194 aa7.85□□□□□ -1.15
TPR-208ENST00000492973 A0A1W2PQD8 194 aa7.85□□□□□ -1.15
TPR-208ENST00000492973 FAM221BA6H8Z2 402 aa7.85□□□□□ -1.15
TPR-208ENST00000492973 HRKO00198 91 aa7.85□□□□□ -1.15
TPR-208ENST00000492973 DHX16O60231 1041 aaKnown RBP7.85□□□□□ -1.15
TPR-208ENST00000492973 SLC25A27O95847 323 aa7.85□□□□□ -1.15
TPR-208ENST00000492973 ICAM1P05362 532 aa7.85□□□□□ -1.15
TPR-208ENST00000492973 SDHBP21912 280 aa7.85□□□□□ -1.15
TPR-208ENST00000492973 GJB2P29033 226 aa7.85□□□□□ -1.15
TPR-208ENST00000492973 MAPK4P31152 587 aa7.85□□□□□ -1.15
TPR-208ENST00000492973 YBX1P67809 324 aaKnown RBP7.85□□□□□ -1.15
TPR-208ENST00000492973 CCNA1P78396 465 aa7.85□□□□□ -1.15
TPR-208ENST00000492973 MAP4K2Q12851 820 aa7.85□□□□□ -1.15
TPR-208ENST00000492973 INF2Q27J81 1249 aa7.85□□□□□ -1.15
TPR-208ENST00000492973 MTERF2Q49AM1 385 aa7.85□□□□□ -1.15
TPR-208ENST00000492973 ZNF648Q5T619 568 aaPredicted RBP7.85□□□□□ -1.15
TPR-208ENST00000492973 PLEKHH3Q7Z736 793 aa7.85□□□□□ -1.15
TPR-208ENST00000492973 NSUN7Q8NE18 718 aaKnown RBP7.85□□□□□ -1.15
TPR-208ENST00000492973 CLEC4DQ8WXI8 215 aa7.85□□□□□ -1.15
TPR-208ENST00000492973 PIBF1Q8WXW3 757 aa7.85□□□□□ -1.15
TPR-208ENST00000492973 ERO1AQ96HE7 468 aa7.85□□□□□ -1.15
TPR-208ENST00000492973 FAM84AQ96KN4 292 aa7.85□□□□□ -1.15
TPR-208ENST00000492973 AARSD1Q9BTE6 412 aaKnown RBP7.85□□□□□ -1.15
TPR-208ENST00000492973 IER2Q9BTL4 223 aa7.85□□□□□ -1.15
TPR-208ENST00000492973 RBM28Q9NW13 759 aaKnown RBP7.85□□□□□ -1.15
TPR-208ENST00000492973 SNTG2Q9NY99 539 aa7.85□□□□□ -1.15
TPR-208ENST00000492973 TMEFF2Q9UIK5 374 aaPredicted RBP7.85□□□□□ -1.15
TPR-208ENST00000492973 GJD2Q9UKL4 321 aa7.85□□□□□ -1.15
TPR-208ENST00000492973 SMC3Q9UQE7 1217 aa7.85□□□□□ -1.15
TPR-208ENST00000492973 CTDP1Q9Y5B0 961 aaPredicted RBP7.85□□□□□ -1.15
TPR-208ENST00000492973 HTTP42858 3142 aa7.85□□□□□ -1.15
TPR-208ENST00000492973 RLFQ13129 1914 aa7.85□□□□□ -1.15
TPR-208ENST00000492973 MYOCOSA0A1B0GUC4 107 aa7.84□□□□□ -1.15
TPR-208ENST00000492973 hCG_1642624A0A1W2PR95 340 aa7.84□□□□□ -1.15
TPR-208ENST00000492973 ZBTB5O15062 677 aa7.84□□□□□ -1.15
TPR-208ENST00000492973 ADCY3O60266 1144 aa7.84□□□□□ -1.15
TPR-208ENST00000492973 JAK2O60674 1132 aa7.84□□□□□ -1.15
TPR-208ENST00000492973 FGFR1P11362 822 aa7.84□□□□□ -1.15
TPR-208ENST00000492973 ALAS1P13196 640 aa7.84□□□□□ -1.15
TPR-208ENST00000492973 FDPSP14324 419 aaKnown RBP7.84□□□□□ -1.15
TPR-208ENST00000492973 IFNAR1P17181 557 aa7.84□□□□□ -1.15
TPR-208ENST00000492973 KCNJ6P48051 423 aa7.84□□□□□ -1.15
TPR-208ENST00000492973 PPP2R5BQ15173 497 aa7.84□□□□□ -1.15
TPR-208ENST00000492973 TKFCQ3LXA3 575 aa7.84□□□□□ -1.15
TPR-208ENST00000492973 MUM1L1Q5H9M0 696 aa7.84□□□□□ -1.15
TPR-208ENST00000492973 IQCEQ6IPM2 695 aa7.84□□□□□ -1.15
TPR-208ENST00000492973 OTOP1Q7RTM1 612 aa7.84□□□□□ -1.15
TPR-208ENST00000492973 GPR142Q7Z601 462 aa7.84□□□□□ -1.15
TPR-208ENST00000492973 ZNF605Q86T29 641 aa7.84□□□□□ -1.15
TPR-208ENST00000492973 HOMER1Q86YM7 354 aa7.84□□□□□ -1.15
TPR-208ENST00000492973 UBXN4Q92575 508 aa7.84□□□□□ -1.15
TPR-208ENST00000492973 USP6NLQ92738 828 aa7.84□□□□□ -1.15
TPR-208ENST00000492973 SPATA9Q9BWV2 254 aa7.84□□□□□ -1.15
TPR-208ENST00000492973 MROH8Q9H579 483 aa7.84□□□□□ -1.15
TPR-208ENST00000492973 RNF146Q9NTX7 359 aa7.84□□□□□ -1.15
TPR-208ENST00000492973 CHMP5Q9NZZ3 219 aa7.84□□□□□ -1.15
TPR-208ENST00000492973 FBLN5Q9UBX5 448 aa7.84□□□□□ -1.15
TPR-208ENST00000492973 CCPG1Q9ULG6 757 aa7.84□□□□□ -1.15
TPR-208ENST00000492973 GABRQQ9UN88 632 aa7.84□□□□□ -1.15
TPR-208ENST00000492973 ZDHHC9Q9Y397 364 aa7.84□□□□□ -1.15
TPR-208ENST00000492973 MYH4Q9Y623 1939 aa7.84□□□□□ -1.16
TPR-208ENST00000492973 CCDC196A0A1B0GTZ2 297 aa7.83□□□□□ -1.16
TPR-208ENST00000492973 SLC15A5A6NIM6 579 aa7.83□□□□□ -1.16
TPR-208ENST00000492973 NFIBO00712 420 aa7.83□□□□□ -1.16
TPR-208ENST00000492973 TNPO2O14787 897 aaKnown RBP7.83□□□□□ -1.16
TPR-208ENST00000492973 MEFVO15553 781 aaPredicted RBP7.83□□□□□ -1.16
TPR-208ENST00000492973 DLX3O60479 287 aa7.83□□□□□ -1.16
TPR-208ENST00000492973 NPHS1O60500 1241 aa7.83□□□□□ -1.16
TPR-208ENST00000492973 MPOP05164 745 aa7.83□□□□□ -1.16
TPR-208ENST00000492973 TACR1P25103 407 aa7.83□□□□□ -1.16
TPR-208ENST00000492973 COPB2P35606 906 aa7.83□□□□□ -1.16
TPR-208ENST00000492973 HMGN5P82970 282 aaKnown RBP7.83□□□□□ -1.16
TPR-208ENST00000492973 PRKCZQ05513 592 aa7.83□□□□□ -1.16
TPR-208ENST00000492973 KCNAB2Q13303 367 aa7.83□□□□□ -1.16
TPR-208ENST00000492973 GRB14Q14449 540 aa7.83□□□□□ -1.16
TPR-208ENST00000492973 CBX2Q14781 532 aaPredicted RBP7.83□□□□□ -1.16
TPR-208ENST00000492973 KIF22Q14807 665 aa7.83□□□□□ -1.16
TPR-208ENST00000492973 PKN1Q16512 942 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms