RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 HAUS6Q7Z4H7 955 aa18.85■□□□□ 0.61
SGMS1-204ENST00000492601 TMEM130Q8N3G9 435 aa18.85■□□□□ 0.61
SGMS1-204ENST00000492601 ATOH1Q92858 354 aaPredicted RBP18.85■□□□□ 0.61
SGMS1-204ENST00000492601 HAPLN2Q9GZV7 340 aa18.85■□□□□ 0.61
SGMS1-204ENST00000492601 BLOC1S4Q9NUP1 217 aa18.85■□□□□ 0.61
SGMS1-204ENST00000492601 NUB1Q9Y5A7 615 aa18.85■□□□□ 0.61
SGMS1-204ENST00000492601 BACE2Q9Y5Z0 518 aa18.85■□□□□ 0.61
SGMS1-204ENST00000492601 MIA3Q5JRA6 1907 aa18.84■□□□□ 0.61
SGMS1-204ENST00000492601 DMDP11532 3685 aa18.84■□□□□ 0.61
SGMS1-204ENST00000492601 SLC26A4O43511 780 aa18.84■□□□□ 0.61
SGMS1-204ENST00000492601 XYLBO75191 536 aa18.84■□□□□ 0.61
SGMS1-204ENST00000492601 FAM13AO94988 1023 aa18.84■□□□□ 0.61
SGMS1-204ENST00000492601 KRT18P05783 430 aaKnown RBP18.84■□□□□ 0.61
SGMS1-204ENST00000492601 NPR3P17342 541 aa18.84■□□□□ 0.61
SGMS1-204ENST00000492601 LONP1P36776 959 aaKnown RBP18.84■□□□□ 0.61
SGMS1-204ENST00000492601 ARPP19P56211 112 aa18.84■□□□□ 0.61
SGMS1-204ENST00000492601 SPAG1Q07617 926 aa18.84■□□□□ 0.61
SGMS1-204ENST00000492601 MCL1Q07820 350 aa18.84■□□□□ 0.61
SGMS1-204ENST00000492601 CUL4AQ13619 759 aa18.84■□□□□ 0.61
SGMS1-204ENST00000492601 VARS2Q5ST30 1063 aaKnown RBP18.84■□□□□ 0.61
SGMS1-204ENST00000492601 MYCT1Q8N699 235 aa18.84■□□□□ 0.61
SGMS1-204ENST00000492601 ZHX3Q9H4I2 956 aa18.84■□□□□ 0.61
SGMS1-204ENST00000492601 HCFC1R1Q9NWW0 138 aa18.84■□□□□ 0.61
SGMS1-204ENST00000492601 TUBGCP4Q9UGJ1 667 aa18.84■□□□□ 0.61
SGMS1-204ENST00000492601 ODF2LQ9ULJ1 636 aa18.84■□□□□ 0.61
SGMS1-204ENST00000492601 VPS13AQ96RL7 3174 aa18.84■□□□□ 0.61
SGMS1-204ENST00000492601 RIF1Q5UIP0 2472 aaKnown RBP18.83■□□□□ 0.61
SGMS1-204ENST00000492601 SCN1AP35498 2009 aa18.83■□□□□ 0.61
SGMS1-204ENST00000492601 H0YCG3 227 aa18.83■□□□□ 0.6
SGMS1-204ENST00000492601 K7ENM7 598 aa18.83■□□□□ 0.6
SGMS1-204ENST00000492601 PI15O43692 258 aa18.83■□□□□ 0.6
SGMS1-204ENST00000492601 HOXA9P31269 272 aa18.83■□□□□ 0.6
SGMS1-204ENST00000492601 RPL9P32969 192 aaKnown RBP18.83■□□□□ 0.6
SGMS1-204ENST00000492601 LIG4P49917 911 aa18.83■□□□□ 0.6
SGMS1-204ENST00000492601 CLCN5P51795 746 aa18.83■□□□□ 0.6
SGMS1-204ENST00000492601 NUBP1P53384 320 aa18.83■□□□□ 0.6
SGMS1-204ENST00000492601 ROR1Q01973 937 aa18.83■□□□□ 0.6
SGMS1-204ENST00000492601 HTR4Q13639 388 aa18.83■□□□□ 0.6
SGMS1-204ENST00000492601 UVSSAQ2YD98 709 aa18.83■□□□□ 0.6
SGMS1-204ENST00000492601 ITFG1Q8TB96 612 aa18.83■□□□□ 0.6
SGMS1-204ENST00000492601 RAD54LQ92698 747 aa18.83■□□□□ 0.6
SGMS1-204ENST00000492601 NXPE3Q969Y0 559 aa18.83■□□□□ 0.6
SGMS1-204ENST00000492601 CDH7Q9ULB5 785 aa18.83■□□□□ 0.6
SGMS1-204ENST00000492601 CA14Q9ULX7 337 aa18.83■□□□□ 0.6
SGMS1-204ENST00000492601 CLIC4Q9Y696 253 aa18.83■□□□□ 0.6
SGMS1-204ENST00000492601 NUMBLQ9Y6R0 609 aa18.83■□□□□ 0.6
SGMS1-204ENST00000492601 ANHXE9PGG2 379 aa18.82■□□□□ 0.6
SGMS1-204ENST00000492601 STK25O00506 426 aa18.82■□□□□ 0.6
SGMS1-204ENST00000492601 HNRNPDLO14979 420 aaKnown RBP18.82■□□□□ 0.6
SGMS1-204ENST00000492601 SRFP11831 508 aa18.82■□□□□ 0.6
SGMS1-204ENST00000492601 MCM4P33991 863 aa18.82■□□□□ 0.6
SGMS1-204ENST00000492601 TNFSF9P41273 254 aa18.82■□□□□ 0.6
SGMS1-204ENST00000492601 SPECC1Q5M775 1068 aa18.82■□□□□ 0.6
SGMS1-204ENST00000492601 FGF13Q92913 245 aa18.82■□□□□ 0.6
SGMS1-204ENST00000492601 RPP25Q9BUL9 199 aaKnown RBP18.82■□□□□ 0.6
SGMS1-204ENST00000492601 PARVGQ9HBI0 331 aa18.82■□□□□ 0.6
SGMS1-204ENST00000492601 DNMT3BQ9UBC3 853 aaKnown RBP18.82■□□□□ 0.6
SGMS1-204ENST00000492601 TBX20Q9UMR3 447 aa18.82■□□□□ 0.6
SGMS1-204ENST00000492601 WDR27A2RRH5 827 aa18.81■□□□□ 0.6
SGMS1-204ENST00000492601 KRBA1A5PL33 1030 aa18.81■□□□□ 0.6
SGMS1-204ENST00000492601 SYN3O14994 580 aa18.81■□□□□ 0.6
SGMS1-204ENST00000492601 CLTAP09496 248 aa18.81■□□□□ 0.6
SGMS1-204ENST00000492601 AOC1P19801 751 aa18.81■□□□□ 0.6
SGMS1-204ENST00000492601 PDCP20941 246 aa18.81■□□□□ 0.6
SGMS1-204ENST00000492601 MARCKSP29966 332 aaPredicted RBP18.81■□□□□ 0.6
SGMS1-204ENST00000492601 PABPC1LQ4VXU2 614 aaKnown RBP18.81■□□□□ 0.6
SGMS1-204ENST00000492601 ZBTB41Q5SVQ8 909 aa18.81■□□□□ 0.6
SGMS1-204ENST00000492601 SLC8B1Q6J4K2 584 aa18.81■□□□□ 0.6
SGMS1-204ENST00000492601 PARM1Q6UWI2 310 aa18.81■□□□□ 0.6
SGMS1-204ENST00000492601 USP49Q70CQ1 688 aa18.81■□□□□ 0.6
SGMS1-204ENST00000492601 ZNF461Q8TAF7 563 aa18.81■□□□□ 0.6
SGMS1-204ENST00000492601 GPR152Q8TDT2 470 aa18.81■□□□□ 0.6
SGMS1-204ENST00000492601 LARP4BQ92615 738 aaKnown RBP18.81■□□□□ 0.6
SGMS1-204ENST00000492601 FGF14Q92915 247 aa18.81■□□□□ 0.6
SGMS1-204ENST00000492601 KIF12Q96FN5 646 aa18.81■□□□□ 0.6
SGMS1-204ENST00000492601 EPSTI1Q96J88 318 aa18.81■□□□□ 0.6
SGMS1-204ENST00000492601 IRF2BPLQ9H1B7 796 aa18.81■□□□□ 0.6
SGMS1-204ENST00000492601 WNT16Q9UBV4 365 aa18.81■□□□□ 0.6
SGMS1-204ENST00000492601 ZFP37Q9Y6Q3 630 aaPredicted RBP18.81■□□□□ 0.6
SGMS1-204ENST00000492601 PTPRZ1P23471 2315 aaPredicted RBP18.81■□□□□ 0.6
SGMS1-204ENST00000492601 CACNA1IQ9P0X4 2223 aa18.81■□□□□ 0.6
SGMS1-204ENST00000492601 FAM186AA6NE01 2351 aa18.8■□□□□ 0.6
SGMS1-204ENST00000492601 TTC26A0AVF1 554 aa18.8■□□□□ 0.6
SGMS1-204ENST00000492601 LACTBL1A8MY62 500 aa18.8■□□□□ 0.6
SGMS1-204ENST00000492601 H7C4K7 107 aa18.8■□□□□ 0.6
SGMS1-204ENST00000492601 PRRG1O14668 218 aa18.8■□□□□ 0.6
SGMS1-204ENST00000492601 TRAK2O60296 914 aa18.8■□□□□ 0.6
SGMS1-204ENST00000492601 TBCAO75347 108 aaKnown RBP18.8■□□□□ 0.6
SGMS1-204ENST00000492601 RFX1P22670 979 aa18.8■□□□□ 0.6
SGMS1-204ENST00000492601 NMT1P30419 496 aaKnown RBP18.8■□□□□ 0.6
SGMS1-204ENST00000492601 ELF1P32519 619 aa18.8■□□□□ 0.6
SGMS1-204ENST00000492601 ZNF131P52739 623 aa18.8■□□□□ 0.6
SGMS1-204ENST00000492601 CTXN3Q4LDR2 81 aa18.8■□□□□ 0.6
SGMS1-204ENST00000492601 FAM173BQ6P4H8 233 aa18.8■□□□□ 0.6
SGMS1-204ENST00000492601 ING5Q8WYH8 240 aa18.8■□□□□ 0.6
SGMS1-204ENST00000492601 SUSD3Q96L08 255 aa18.8■□□□□ 0.6
SGMS1-204ENST00000492601 PLEKHA5Q9HAU0 1116 aa18.8■□□□□ 0.6
SGMS1-204ENST00000492601 FBXL5Q9UKA1 691 aa18.8■□□□□ 0.6
SGMS1-204ENST00000492601 TBC1D4O60343 1298 aa18.79■□□□□ 0.6
SGMS1-204ENST00000492601 ABLIM3O94929 683 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms