RNA–Protein interactions for RNA: ENST00000491607.5

SMIM4-205, Transcript of small integral membrane protein 4, humanhuman

TSL 3

Gene SMIM4, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-205ENST00000491607 SLC10A6Q3KNW5 377 aa20.08■□□□□ 0.81
SMIM4-205ENST00000491607 ARSHQ5FYA8 562 aa20.08■□□□□ 0.81
SMIM4-205ENST00000491607 GPBP1Q86WP2 473 aa20.08■□□□□ 0.81
SMIM4-205ENST00000491607 ITFG1Q8TB96 612 aa20.08■□□□□ 0.81
SMIM4-205ENST00000491607 FGF13Q92913 245 aa20.08■□□□□ 0.81
SMIM4-205ENST00000491607 RTP3Q9BQQ7 232 aa20.08■□□□□ 0.81
SMIM4-205ENST00000491607 REEP2Q9BRK0 252 aa20.08■□□□□ 0.81
SMIM4-205ENST00000491607 GFRA3O60609 400 aa20.07■□□□□ 0.8
SMIM4-205ENST00000491607 KRT18P05783 430 aaKnown RBP20.07■□□□□ 0.8
SMIM4-205ENST00000491607 MCM4P33991 863 aa20.07■□□□□ 0.8
SMIM4-205ENST00000491607 NCKAP1LP55160 1127 aa20.07■□□□□ 0.8
SMIM4-205ENST00000491607 ROR1Q01973 937 aa20.07■□□□□ 0.8
SMIM4-205ENST00000491607 MCL1Q07820 350 aa20.07■□□□□ 0.8
SMIM4-205ENST00000491607 PABPC1LQ4VXU2 614 aaKnown RBP20.07■□□□□ 0.8
SMIM4-205ENST00000491607 PARM1Q6UWI2 310 aa20.07■□□□□ 0.8
SMIM4-205ENST00000491607 HAUS6Q7Z4H7 955 aa20.07■□□□□ 0.8
SMIM4-205ENST00000491607 BRAPQ7Z569 592 aa20.07■□□□□ 0.8
SMIM4-205ENST00000491607 FGF14Q92915 247 aa20.07■□□□□ 0.8
SMIM4-205ENST00000491607 DNMT3BQ9UBC3 853 aaKnown RBP20.07■□□□□ 0.8
SMIM4-205ENST00000491607 TUBGCP4Q9UGJ1 667 aa20.07■□□□□ 0.8
SMIM4-205ENST00000491607 ODF2LQ9ULJ1 636 aa20.07■□□□□ 0.8
SMIM4-205ENST00000491607 PIEZO1Q92508 2521 aa20.07■□□□□ 0.8
SMIM4-205ENST00000491607 VPS37CA5D8V6 355 aaPredicted RBP20.06■□□□□ 0.8
SMIM4-205ENST00000491607 H7C4K7 107 aa20.06■□□□□ 0.8
SMIM4-205ENST00000491607 PRRG1O14668 218 aa20.06■□□□□ 0.8
SMIM4-205ENST00000491607 SYN3O14994 580 aa20.06■□□□□ 0.8
SMIM4-205ENST00000491607 SLC26A4O43511 780 aa20.06■□□□□ 0.8
SMIM4-205ENST00000491607 FAM13AO94988 1023 aa20.06■□□□□ 0.8
SMIM4-205ENST00000491607 BMP15O95972 392 aa20.06■□□□□ 0.8
SMIM4-205ENST00000491607 POU2F2P09086 479 aa20.06■□□□□ 0.8
SMIM4-205ENST00000491607 CXCL8P10145 99 aa20.06■□□□□ 0.8
SMIM4-205ENST00000491607 ELF1P32519 619 aa20.06■□□□□ 0.8
SMIM4-205ENST00000491607 LIG4P49917 911 aa20.06■□□□□ 0.8
SMIM4-205ENST00000491607 SPAG1Q07617 926 aa20.06■□□□□ 0.8
SMIM4-205ENST00000491607 SLC8B1Q6J4K2 584 aa20.06■□□□□ 0.8
SMIM4-205ENST00000491607 MTSS1LQ765P7 747 aa20.06■□□□□ 0.8
SMIM4-205ENST00000491607 RTL10Q7L3V2 364 aa20.06■□□□□ 0.8
SMIM4-205ENST00000491607 CCDC105Q8IYK2 499 aa20.06■□□□□ 0.8
SMIM4-205ENST00000491607 MYCT1Q8N699 235 aa20.06■□□□□ 0.8
SMIM4-205ENST00000491607 ZNF461Q8TAF7 563 aa20.06■□□□□ 0.8
SMIM4-205ENST00000491607 RPP25Q9BUL9 199 aaKnown RBP20.06■□□□□ 0.8
SMIM4-205ENST00000491607 ZHX3Q9H4I2 956 aa20.06■□□□□ 0.8
SMIM4-205ENST00000491607 ARHGEF3Q9NR81 526 aa20.06■□□□□ 0.8
SMIM4-205ENST00000491607 WDR27A2RRH5 827 aa20.05■□□□□ 0.8
SMIM4-205ENST00000491607 K7ENM7 598 aa20.05■□□□□ 0.8
SMIM4-205ENST00000491607 HNRNPDLO14979 420 aaKnown RBP20.05■□□□□ 0.8
SMIM4-205ENST00000491607 LRG1P02750 347 aa20.05■□□□□ 0.8
SMIM4-205ENST00000491607 CLTAP09496 248 aa20.05■□□□□ 0.8
SMIM4-205ENST00000491607 PLCG1P19174 1290 aa20.05■□□□□ 0.8
SMIM4-205ENST00000491607 LONP1P36776 959 aaKnown RBP20.05■□□□□ 0.8
SMIM4-205ENST00000491607 GRIN1Q05586 938 aa20.05■□□□□ 0.8
SMIM4-205ENST00000491607 KARSQ15046 597 aaKnown RBP20.05■□□□□ 0.8
SMIM4-205ENST00000491607 SF3A1Q15459 793 aaKnown RBP20.05■□□□□ 0.8
SMIM4-205ENST00000491607 CTXN3Q4LDR2 81 aa20.05■□□□□ 0.8
SMIM4-205ENST00000491607 DTWD2Q8NBA8 298 aa20.05■□□□□ 0.8
SMIM4-205ENST00000491607 ING5Q8WYH8 240 aa20.05■□□□□ 0.8
SMIM4-205ENST00000491607 HAPLN2Q9GZV7 340 aa20.05■□□□□ 0.8
SMIM4-205ENST00000491607 TBC1D17Q9HA65 648 aa20.05■□□□□ 0.8
SMIM4-205ENST00000491607 CYP4F11Q9HBI6 524 aa20.05■□□□□ 0.8
SMIM4-205ENST00000491607 MRPS23Q9Y3D9 190 aaKnown RBP20.05■□□□□ 0.8
SMIM4-205ENST00000491607 PPP2R3AQ06190 1150 aa20.04■□□□□ 0.8
SMIM4-205ENST00000491607 MCM6Q14566 821 aa20.04■□□□□ 0.8
SMIM4-205ENST00000491607 LRRC15Q8TF66 581 aa20.04■□□□□ 0.8
SMIM4-205ENST00000491607 KIF12Q96FN5 646 aa20.04■□□□□ 0.8
SMIM4-205ENST00000491607 SUSD3Q96L08 255 aa20.04■□□□□ 0.8
SMIM4-205ENST00000491607 PLEKHA5Q9HAU0 1116 aa20.04■□□□□ 0.8
SMIM4-205ENST00000491607 PARVGQ9HBI0 331 aa20.04■□□□□ 0.8
SMIM4-205ENST00000491607 SLC2A4RGQ9NR83 387 aa20.04■□□□□ 0.8
SMIM4-205ENST00000491607 BLOC1S4Q9NUP1 217 aa20.04■□□□□ 0.8
SMIM4-205ENST00000491607 FBXL5Q9UKA1 691 aa20.04■□□□□ 0.8
SMIM4-205ENST00000491607 KCNH3Q9ULD8 1083 aa20.04■□□□□ 0.8
SMIM4-205ENST00000491607 TBX20Q9UMR3 447 aa20.04■□□□□ 0.8
SMIM4-205ENST00000491607 USP34Q70CQ2 3546 aa20.03■□□□□ 0.8
SMIM4-205ENST00000491607 TRIP11Q15643 1979 aa20.03■□□□□ 0.8
SMIM4-205ENST00000491607 TRAK2O60296 914 aa20.03■□□□□ 0.8
SMIM4-205ENST00000491607 TBCAO75347 108 aaKnown RBP20.03■□□□□ 0.8
SMIM4-205ENST00000491607 ABLIM3O94929 683 aa20.03■□□□□ 0.8
SMIM4-205ENST00000491607 MARCKSP29966 332 aaPredicted RBP20.03■□□□□ 0.8
SMIM4-205ENST00000491607 TNFSF9P41273 254 aa20.03■□□□□ 0.8
SMIM4-205ENST00000491607 GPC5P78333 572 aa20.03■□□□□ 0.8
SMIM4-205ENST00000491607 ANGPT1Q15389 498 aa20.03■□□□□ 0.8
SMIM4-205ENST00000491607 SPECC1Q5M775 1068 aa20.03■□□□□ 0.8
SMIM4-205ENST00000491607 ZNF280DQ6N043 979 aa20.03■□□□□ 0.8
SMIM4-205ENST00000491607 NPAS3Q8IXF0 933 aa20.03■□□□□ 0.8
SMIM4-205ENST00000491607 TMEM130Q8N3G9 435 aa20.03■□□□□ 0.8
SMIM4-205ENST00000491607 APPL2Q8NEU8 664 aa20.03■□□□□ 0.8
SMIM4-205ENST00000491607 RAD54LQ92698 747 aa20.03■□□□□ 0.8
SMIM4-205ENST00000491607 DDX12PQ92771 950 aa20.03■□□□□ 0.8
SMIM4-205ENST00000491607 KXD1Q9BQD3 176 aa20.03■□□□□ 0.8
SMIM4-205ENST00000491607 MYO15AQ9UKN7 3530 aa20.02■□□□□ 0.8
SMIM4-205ENST00000491607 TTC26A0AVF1 554 aa20.02■□□□□ 0.8
SMIM4-205ENST00000491607 TBC1D4O60343 1298 aa20.02■□□□□ 0.8
SMIM4-205ENST00000491607 RHOP08100 348 aa20.02■□□□□ 0.8
SMIM4-205ENST00000491607 ATF2P15336 505 aa20.02■□□□□ 0.8
SMIM4-205ENST00000491607 PTPN2P17706 415 aa20.02■□□□□ 0.8
SMIM4-205ENST00000491607 NBL1P41271 181 aa20.02■□□□□ 0.8
SMIM4-205ENST00000491607 MRPL58Q14197 206 aaKnown RBP20.02■□□□□ 0.8
SMIM4-205ENST00000491607 KYAT1Q16773 422 aa20.02■□□□□ 0.8
SMIM4-205ENST00000491607 FRMD5Q7Z6J6 570 aa20.02■□□□□ 0.8
SMIM4-205ENST00000491607 LARP4BQ92615 738 aaKnown RBP20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms