RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 UMODL1Q5DID0 1318 aa24.51■■□□□ 1.51
USF3-203ENST00000491165 CRYBB1P53674 252 aaPredicted RBP24.5■■□□□ 1.51
USF3-203ENST00000491165 POLR2FP61218 127 aaKnown RBP24.5■■□□□ 1.51
USF3-203ENST00000491165 SLC7A5Q01650 507 aa24.5■■□□□ 1.51
USF3-203ENST00000491165 FAM76AQ8TAV0 307 aa24.5■■□□□ 1.51
USF3-203ENST00000491165 GCOM2Q9BZD3 368 aaPredicted RBP24.5■■□□□ 1.51
USF3-203ENST00000491165 EHD2Q9NZN4 543 aa24.5■■□□□ 1.51
USF3-203ENST00000491165 TRPV2Q9Y5S1 764 aa24.5■■□□□ 1.51
USF3-203ENST00000491165 ACKR2O00590 384 aa24.5■■□□□ 1.51
USF3-203ENST00000491165 TNFRSF8P28908 595 aa24.5■■□□□ 1.51
USF3-203ENST00000491165 MBTPS1Q14703 1052 aa24.5■■□□□ 1.51
USF3-203ENST00000491165 CFAP221Q4G0U5 840 aa24.5■■□□□ 1.51
USF3-203ENST00000491165 GLE1Q53GS7 698 aaKnown RBP24.5■■□□□ 1.51
USF3-203ENST00000491165 C8orf74Q6P047 294 aa24.5■■□□□ 1.51
USF3-203ENST00000491165 EMBQ6PCB8 327 aa24.5■■□□□ 1.51
USF3-203ENST00000491165 FOXR1Q6PIV2 292 aa24.5■■□□□ 1.51
USF3-203ENST00000491165 RSPH3Q86UC2 560 aa24.5■■□□□ 1.51
USF3-203ENST00000491165 BICD1Q96G01 975 aa24.5■■□□□ 1.51
USF3-203ENST00000491165 CPB2Q96IY4 423 aa24.5■■□□□ 1.51
USF3-203ENST00000491165 PCIF1Q9H4Z3 704 aa24.5■■□□□ 1.51
USF3-203ENST00000491165 NOC2LQ9Y3T9 749 aaKnown RBP24.5■■□□□ 1.51
USF3-203ENST00000491165 GOLGA6CA6NDK9 693 aa24.49■■□□□ 1.51
USF3-203ENST00000491165 TSPAN1O60635 241 aa24.49■■□□□ 1.51
USF3-203ENST00000491165 GOLGA6DP0CG33 693 aa24.49■■□□□ 1.51
USF3-203ENST00000491165 CDC42EP1Q00587 391 aa24.49■■□□□ 1.51
USF3-203ENST00000491165 NECAB2Q7Z6G3 386 aa24.49■■□□□ 1.51
USF3-203ENST00000491165 ACO2Q99798 780 aaKnown RBP24.49■■□□□ 1.51
USF3-203ENST00000491165 SEZ6LQ9BYH1 1024 aa24.49■■□□□ 1.51
USF3-203ENST00000491165 GOLGA6AQ9NYA3 693 aa24.49■■□□□ 1.51
USF3-203ENST00000491165 ATP11BQ9Y2G3 1177 aa24.49■■□□□ 1.51
USF3-203ENST00000491165 SCN5AQ14524 2016 aa24.49■■□□□ 1.51
USF3-203ENST00000491165 ABLIM1O14639 778 aa24.49■■□□□ 1.51
USF3-203ENST00000491165 PIGRP01833 764 aa24.49■■□□□ 1.51
USF3-203ENST00000491165 ARF4P18085 180 aaPredicted RBP24.49■■□□□ 1.51
USF3-203ENST00000491165 NR2F2P24468 414 aa24.49■■□□□ 1.51
USF3-203ENST00000491165 SLC20A2Q08357 652 aa24.49■■□□□ 1.51
USF3-203ENST00000491165 FAM187BQ17R55 369 aa24.49■■□□□ 1.51
USF3-203ENST00000491165 FAM228AQ86W67 206 aa24.49■■□□□ 1.51
USF3-203ENST00000491165 AGO3Q9H9G7 860 aaKnown RBP24.49■■□□□ 1.51
USF3-203ENST00000491165 RBM12Q9NTZ6 932 aaKnown RBP24.49■■□□□ 1.51
USF3-203ENST00000491165 MROH7Q68CQ1 1323 aa24.49■■□□□ 1.51
USF3-203ENST00000491165 NR3C1P04150 777 aa24.48■■□□□ 1.51
USF3-203ENST00000491165 CASP4P49662 377 aa24.48■■□□□ 1.51
USF3-203ENST00000491165 PRPF4BQ13523 1007 aaKnown RBP24.48■■□□□ 1.51
USF3-203ENST00000491165 EDRF1Q3B7T1 1238 aa24.48■■□□□ 1.51
USF3-203ENST00000491165 ZC3H3Q8IXZ2 948 aaKnown RBP24.48■■□□□ 1.51
USF3-203ENST00000491165 PRMT7Q9NVM4 692 aaPredicted RBP24.48■■□□□ 1.51
USF3-203ENST00000491165 TET1Q8NFU7 2136 aa24.48■■□□□ 1.51
USF3-203ENST00000491165 HOXA11P31270 313 aaPredicted RBP24.47■■□□□ 1.51
USF3-203ENST00000491165 LIG4P49917 911 aa24.47■■□□□ 1.51
USF3-203ENST00000491165 MRPS25P82663 173 aaKnown RBP24.47■■□□□ 1.51
USF3-203ENST00000491165 NAB2Q15742 525 aa24.47■■□□□ 1.51
USF3-203ENST00000491165 SLC18A3Q16572 532 aa24.47■■□□□ 1.51
USF3-203ENST00000491165 EEF1DP3Q658K8 133 aa24.47■■□□□ 1.51
USF3-203ENST00000491165 PPP4R3CPQ6ZMV5 832 aa24.47■■□□□ 1.51
USF3-203ENST00000491165 HS2ST1Q7LGA3 356 aa24.47■■□□□ 1.51
USF3-203ENST00000491165 MRPL4Q9BYD3 311 aaKnown RBP24.47■■□□□ 1.51
USF3-203ENST00000491165 ANKFY1Q9P2R3 1169 aa24.47■■□□□ 1.51
USF3-203ENST00000491165 EXOC7Q9UPT5 735 aa24.47■■□□□ 1.51
USF3-203ENST00000491165 CNTNAP2Q9UHC6 1331 aa24.47■■□□□ 1.51
USF3-203ENST00000491165 M0QZ92 97 aa24.47■■□□□ 1.51
USF3-203ENST00000491165 SHOX2O60902 331 aaPredicted RBP24.47■■□□□ 1.51
USF3-203ENST00000491165 ADAM9Q13443 819 aa24.47■■□□□ 1.51
USF3-203ENST00000491165 RAPGEF1Q13905 1077 aa24.47■■□□□ 1.51
USF3-203ENST00000491165 CAVIN3Q969G5 261 aa24.47■■□□□ 1.51
USF3-203ENST00000491165 TOX2Q96NM4 488 aa24.47■■□□□ 1.51
USF3-203ENST00000491165 RASSF4Q9H2L5 321 aa24.47■■□□□ 1.51
USF3-203ENST00000491165 PTPRHQ9HD43 1115 aa24.47■■□□□ 1.51
USF3-203ENST00000491165 DMAC2Q9NW81 257 aa24.47■■□□□ 1.51
USF3-203ENST00000491165 TANC1Q9C0D5 1861 aa24.46■■□□□ 1.51
USF3-203ENST00000491165 GOLGA8KD6RF30 607 aa24.46■■□□□ 1.51
USF3-203ENST00000491165 CALUO43852 315 aaPredicted RBP24.46■■□□□ 1.51
USF3-203ENST00000491165 PALMO75781 387 aa24.46■■□□□ 1.51
USF3-203ENST00000491165 GHRP10912 638 aa24.46■■□□□ 1.51
USF3-203ENST00000491165 SCP2P22307 547 aa24.46■■□□□ 1.51
USF3-203ENST00000491165 CYP2J2P51589 502 aa24.46■■□□□ 1.51
USF3-203ENST00000491165 FAM26DQ5JW98 314 aa24.46■■□□□ 1.51
USF3-203ENST00000491165 FBXO47Q5MNV8 452 aa24.46■■□□□ 1.51
USF3-203ENST00000491165 SH3GL2Q99962 352 aa24.46■■□□□ 1.51
USF3-203ENST00000491165 TMEM51Q9NW97 253 aa24.46■■□□□ 1.51
USF3-203ENST00000491165 OPA1O60313 960 aa24.46■■□□□ 1.51
USF3-203ENST00000491165 AKAP3O75969 853 aa24.46■■□□□ 1.51
USF3-203ENST00000491165 PROZP22891 400 aa24.46■■□□□ 1.51
USF3-203ENST00000491165 ABCD1P33897 745 aa24.46■■□□□ 1.51
USF3-203ENST00000491165 GPNMBQ14956 572 aa24.46■■□□□ 1.51
USF3-203ENST00000491165 ATF7IP2Q5U623 682 aa24.46■■□□□ 1.51
USF3-203ENST00000491165 ZPBP2Q6X784 338 aa24.46■■□□□ 1.51
USF3-203ENST00000491165 TSHZ1Q6ZSZ6 1077 aa24.46■■□□□ 1.51
USF3-203ENST00000491165 CATSPER4Q7RTX7 472 aa24.46■■□□□ 1.51
USF3-203ENST00000491165 SAAL1Q96ER3 474 aa24.46■■□□□ 1.51
USF3-203ENST00000491165 MS4A14Q96JA4 679 aa24.46■■□□□ 1.51
USF3-203ENST00000491165 AIPL1Q9NZN9 384 aa24.46■■□□□ 1.51
USF3-203ENST00000491165 STYXL1Q9Y6J8 313 aa24.46■■□□□ 1.51
USF3-203ENST00000491165 ERLIN2O94905 339 aa24.45■■□□□ 1.5
USF3-203ENST00000491165 KLHL30Q0D2K2 578 aa24.45■■□□□ 1.5
USF3-203ENST00000491165 LPIN1Q14693 890 aa24.45■■□□□ 1.5
USF3-203ENST00000491165 SEZ6Q53EL9 994 aa24.45■■□□□ 1.5
USF3-203ENST00000491165 ALS2CLQ60I27 953 aa24.45■■□□□ 1.5
USF3-203ENST00000491165 C10orf67Q8IYJ2 551 aa24.45■■□□□ 1.5
USF3-203ENST00000491165 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms