RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 CCDC65Q8IXS2 484 aa8.29□□□□□ -1.08
CLDN1-202ENST00000490800 ABI1Q8IZP0 508 aa8.29□□□□□ -1.08
CLDN1-202ENST00000490800 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.29□□□□□ -1.08
CLDN1-202ENST00000490800 KIAA0895Q8NCT3 520 aa8.29□□□□□ -1.08
CLDN1-202ENST00000490800 ENOX1Q8TC92 643 aaKnown RBP8.29□□□□□ -1.08
CLDN1-202ENST00000490800 MSLNLQ96KJ4 702 aa8.29□□□□□ -1.08
CLDN1-202ENST00000490800 REEP2Q9BRK0 252 aa8.29□□□□□ -1.08
CLDN1-202ENST00000490800 GCOM2Q9BZD3 368 aaPredicted RBP8.29□□□□□ -1.08
CLDN1-202ENST00000490800 GTPBP4Q9BZE4 634 aaKnown RBP8.29□□□□□ -1.08
CLDN1-202ENST00000490800 HSD3B7Q9H2F3 369 aa8.29□□□□□ -1.08
CLDN1-202ENST00000490800 ANKEF1Q9NU02 776 aa8.29□□□□□ -1.08
CLDN1-202ENST00000490800 PRKAG3Q9UGI9 489 aa8.29□□□□□ -1.08
CLDN1-202ENST00000490800 CD207Q9UJ71 328 aa8.29□□□□□ -1.08
CLDN1-202ENST00000490800 CTNND2Q9UQB3 1225 aa8.29□□□□□ -1.08
CLDN1-202ENST00000490800 LOXHD1Q8IVV2 1947 aa8.29□□□□□ -1.08
CLDN1-202ENST00000490800 MYH9P35579 1960 aaKnown RBP8.28□□□□□ -1.08
CLDN1-202ENST00000490800 NLRC5Q86WI3 1866 aa8.28□□□□□ -1.08
CLDN1-202ENST00000490800 GDF9O60383 454 aa8.28□□□□□ -1.08
CLDN1-202ENST00000490800 PRMT3O60678 531 aa8.28□□□□□ -1.08
CLDN1-202ENST00000490800 DKC1O60832 514 aaKnown RBP eCLIP8.28□□□□□ -1.08
CLDN1-202ENST00000490800 LAG3P18627 525 aa8.28□□□□□ -1.08
CLDN1-202ENST00000490800 GUCY2CP25092 1073 aa8.28□□□□□ -1.08
CLDN1-202ENST00000490800 RARRES1P49788 294 aa8.28□□□□□ -1.08
CLDN1-202ENST00000490800 GDF10P55107 478 aa8.28□□□□□ -1.08
CLDN1-202ENST00000490800 STX17P56962 302 aa8.28□□□□□ -1.08
CLDN1-202ENST00000490800 PAK1Q13153 545 aa8.28□□□□□ -1.08
CLDN1-202ENST00000490800 PSMD2Q13200 908 aa8.28□□□□□ -1.08
CLDN1-202ENST00000490800 SMAD4Q13485 552 aaKnown RBP8.28□□□□□ -1.08
CLDN1-202ENST00000490800 SWI5Q1ZZU3 235 aa8.28□□□□□ -1.08
CLDN1-202ENST00000490800 CLLU1OSQ5K130 101 aa8.28□□□□□ -1.08
CLDN1-202ENST00000490800 FAM26FQ5R3K3 315 aa8.28□□□□□ -1.08
CLDN1-202ENST00000490800 TSEN2Q8NCE0 465 aaKnown RBP8.28□□□□□ -1.08
CLDN1-202ENST00000490800 GLIS3Q8NEA6 775 aa8.28□□□□□ -1.08
CLDN1-202ENST00000490800 HELQQ8TDG4 1101 aa8.28□□□□□ -1.08
CLDN1-202ENST00000490800 NELFBQ8WX92 580 aa8.28□□□□□ -1.08
CLDN1-202ENST00000490800 CEP170P1Q96L14 293 aa8.28□□□□□ -1.08
CLDN1-202ENST00000490800 ZNF558Q96NG5 402 aa8.28□□□□□ -1.08
CLDN1-202ENST00000490800 HINFPQ9BQA5 517 aa8.28□□□□□ -1.08
CLDN1-202ENST00000490800 INO80BQ9C086 356 aaPredicted RBP8.28□□□□□ -1.08
CLDN1-202ENST00000490800 SLC39A2Q9NP94 309 aa8.28□□□□□ -1.08
CLDN1-202ENST00000490800 CYP26B1Q9NR63 512 aa8.28□□□□□ -1.08
CLDN1-202ENST00000490800 TLR9Q9NR96 1032 aa8.28□□□□□ -1.08
CLDN1-202ENST00000490800 CHST12Q9NRB3 414 aa8.28□□□□□ -1.08
CLDN1-202ENST00000490800 RAB6BQ9NRW1 208 aa8.28□□□□□ -1.08
CLDN1-202ENST00000490800 ZNF358Q9NW07 568 aa8.28□□□□□ -1.08
CLDN1-202ENST00000490800 KCND2Q9NZV8 630 aa8.28□□□□□ -1.08
CLDN1-202ENST00000490800 PUF60Q9UHX1 559 aaKnown RBP8.28□□□□□ -1.08
CLDN1-202ENST00000490800 RWDD2AQ9UIY3 292 aa8.28□□□□□ -1.08
CLDN1-202ENST00000490800 BARX2Q9UMQ3 279 aaPredicted RBP8.28□□□□□ -1.08
CLDN1-202ENST00000490800 MAPK8IP1Q9UQF2 711 aa8.28□□□□□ -1.08
CLDN1-202ENST00000490800 RALGAPA2Q2PPJ7 1873 aa8.28□□□□□ -1.08
CLDN1-202ENST00000490800 HIDE1A8MVS5 230 aa8.27□□□□□ -1.09
CLDN1-202ENST00000490800 NT5C1B-RDH14C9J2C7 533 aa8.27□□□□□ -1.09
CLDN1-202ENST00000490800 FSCN2O14926 492 aa8.27□□□□□ -1.09
CLDN1-202ENST00000490800 DCXO43602 365 aa8.27□□□□□ -1.09
CLDN1-202ENST00000490800 TBCAO75347 108 aaKnown RBP8.27□□□□□ -1.09
CLDN1-202ENST00000490800 FAM13AO94988 1023 aa8.27□□□□□ -1.09
CLDN1-202ENST00000490800 ADCY5O95622 1261 aa8.27□□□□□ -1.09
CLDN1-202ENST00000490800 GLP2RO95838 553 aa8.27□□□□□ -1.09
CLDN1-202ENST00000490800 SRGAP2CP0DJJ0 459 aa8.27□□□□□ -1.09
CLDN1-202ENST00000490800 ATF7P17544 494 aaPredicted RBP8.27□□□□□ -1.09
CLDN1-202ENST00000490800 GAP43P17677 238 aa8.27□□□□□ -1.09
CLDN1-202ENST00000490800 SFPQP23246 707 aaKnown RBP eCLIP8.27□□□□□ -1.09
CLDN1-202ENST00000490800 PPP1R2P41236 205 aa8.27□□□□□ -1.09
CLDN1-202ENST00000490800 PHKA2P46019 1235 aa8.27□□□□□ -1.09
CLDN1-202ENST00000490800 ZNF131P52739 623 aa8.27□□□□□ -1.09
CLDN1-202ENST00000490800 PMS1P54277 932 aaKnown RBP8.27□□□□□ -1.09
CLDN1-202ENST00000490800 WDR4P57081 412 aaKnown RBP8.27□□□□□ -1.09
CLDN1-202ENST00000490800 KRT17Q04695 432 aa8.27□□□□□ -1.09
CLDN1-202ENST00000490800 KCNA1Q09470 495 aa8.27□□□□□ -1.09
CLDN1-202ENST00000490800 MAPK7Q13164 816 aa8.27□□□□□ -1.09
CLDN1-202ENST00000490800 CBLBQ13191 982 aa8.27□□□□□ -1.09
CLDN1-202ENST00000490800 STIM1Q13586 685 aa8.27□□□□□ -1.09
CLDN1-202ENST00000490800 DUSP6Q16828 381 aa8.27□□□□□ -1.09
CLDN1-202ENST00000490800 XKR9Q5GH70 373 aa8.27□□□□□ -1.09
CLDN1-202ENST00000490800 HERC4Q5GLZ8 1057 aaPredicted RBP8.27□□□□□ -1.09
CLDN1-202ENST00000490800 SPATA1Q5VX52 437 aa8.27□□□□□ -1.09
CLDN1-202ENST00000490800 PLPP4Q5VZY2 271 aa8.27□□□□□ -1.09
CLDN1-202ENST00000490800 TWF2Q6IBS0 349 aaKnown RBP8.27□□□□□ -1.09
CLDN1-202ENST00000490800 PDE12Q6L8Q7 609 aaKnown RBP8.27□□□□□ -1.09
CLDN1-202ENST00000490800 SARM1Q6SZW1 724 aa8.27□□□□□ -1.09
CLDN1-202ENST00000490800 OTUD6AQ7L8S5 288 aa8.27□□□□□ -1.09
CLDN1-202ENST00000490800 CATSPER4Q7RTX7 472 aa8.27□□□□□ -1.09
CLDN1-202ENST00000490800 TMC7Q7Z402 723 aa8.27□□□□□ -1.09
CLDN1-202ENST00000490800 ZNF410Q86VK4 478 aa8.27□□□□□ -1.09
CLDN1-202ENST00000490800 SFR1Q86XK3 245 aa8.27□□□□□ -1.09
CLDN1-202ENST00000490800 DAW1Q8N136 415 aa8.27□□□□□ -1.09
CLDN1-202ENST00000490800 LRRC43Q8N309 656 aa8.27□□□□□ -1.09
CLDN1-202ENST00000490800 GUF1Q8N442 669 aaKnown RBP8.27□□□□□ -1.09
CLDN1-202ENST00000490800 VN1R2Q8NFZ6 395 aa8.27□□□□□ -1.09
CLDN1-202ENST00000490800 PRPF31Q8WWY3 499 aaKnown RBP8.27□□□□□ -1.09
CLDN1-202ENST00000490800 LPPQ93052 612 aa8.27□□□□□ -1.09
CLDN1-202ENST00000490800 TMEM143Q96AN5 459 aa8.27□□□□□ -1.09
CLDN1-202ENST00000490800 ITPKCQ96DU7 683 aa8.27□□□□□ -1.09
CLDN1-202ENST00000490800 DHTKD1Q96HY7 919 aaPredicted RBP8.27□□□□□ -1.09
CLDN1-202ENST00000490800 NLRP4Q96MN2 994 aa8.27□□□□□ -1.09
CLDN1-202ENST00000490800 TCF25Q9BQ70 676 aa8.27□□□□□ -1.09
CLDN1-202ENST00000490800 JPH2Q9BR39 696 aaPredicted RBP8.27□□□□□ -1.09
CLDN1-202ENST00000490800 FGFBP2Q9BYJ0 223 aa8.27□□□□□ -1.09
CLDN1-202ENST00000490800 ZHX3Q9H4I2 956 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms