RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 ZBTB45Q96K62 511 aaPredicted RBP21.55■■□□□ 1.04
SREBF1-216ENST00000490796 ZMAT2Q96NC0 199 aaKnown RBP21.55■■□□□ 1.04
SREBF1-216ENST00000490796 PNMA5Q96PV4 448 aa21.55■■□□□ 1.04
SREBF1-216ENST00000490796 CNTN3Q9P232 1028 aa21.55■■□□□ 1.04
SREBF1-216ENST00000490796 KCNH3Q9ULD8 1083 aa21.55■■□□□ 1.04
SREBF1-216ENST00000490796 MRPS23Q9Y3D9 190 aaKnown RBP21.55■■□□□ 1.04
SREBF1-216ENST00000490796 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.55■■□□□ 1.04
SREBF1-216ENST00000490796 VWA8A3KMH1 1905 aa21.55■■□□□ 1.04
SREBF1-216ENST00000490796 UBA7P41226 1012 aa21.54■■□□□ 1.04
SREBF1-216ENST00000490796 ANGPT1Q15389 498 aa21.54■■□□□ 1.04
SREBF1-216ENST00000490796 PARM1Q6UWI2 310 aa21.54■■□□□ 1.04
SREBF1-216ENST00000490796 CD300LGQ6UXG3 332 aa21.54■■□□□ 1.04
SREBF1-216ENST00000490796 RSPO2Q6UXX9 243 aaPredicted RBP21.54■■□□□ 1.04
SREBF1-216ENST00000490796 ZPBP2Q6X784 338 aa21.54■■□□□ 1.04
SREBF1-216ENST00000490796 FRMD5Q7Z6J6 570 aa21.54■■□□□ 1.04
SREBF1-216ENST00000490796 TMEM161BQ8NDZ6 487 aa21.54■■□□□ 1.04
SREBF1-216ENST00000490796 ITFG1Q8TB96 612 aa21.54■■□□□ 1.04
SREBF1-216ENST00000490796 FGF14Q92915 247 aa21.54■■□□□ 1.04
SREBF1-216ENST00000490796 NKD2Q969F2 451 aaPredicted RBP21.54■■□□□ 1.04
SREBF1-216ENST00000490796 AK8Q96MA6 479 aa21.54■■□□□ 1.04
SREBF1-216ENST00000490796 SLC2A4RGQ9NR83 387 aa21.54■■□□□ 1.04
SREBF1-216ENST00000490796 DOCK6Q96HP0 2047 aa21.54■■□□□ 1.04
SREBF1-216ENST00000490796 FAM186AA6NE01 2351 aa21.53■■□□□ 1.04
SREBF1-216ENST00000490796 MAPTP10636 758 aaKnown RBP21.53■■□□□ 1.04
SREBF1-216ENST00000490796 MARCKSP29966 332 aaPredicted RBP21.53■■□□□ 1.04
SREBF1-216ENST00000490796 MCM4P33991 863 aa21.53■■□□□ 1.04
SREBF1-216ENST00000490796 SLC12A3P55017 1021 aa21.53■■□□□ 1.04
SREBF1-216ENST00000490796 ROR1Q01973 937 aa21.53■■□□□ 1.04
SREBF1-216ENST00000490796 SPECC1Q5M775 1068 aa21.53■■□□□ 1.04
SREBF1-216ENST00000490796 LARP1BQ659C4 914 aaKnown RBP21.53■■□□□ 1.04
SREBF1-216ENST00000490796 APPL2Q8NEU8 664 aa21.53■■□□□ 1.04
SREBF1-216ENST00000490796 ZNF461Q8TAF7 563 aa21.53■■□□□ 1.04
SREBF1-216ENST00000490796 C18orf25Q96B23 403 aaPredicted RBP21.53■■□□□ 1.04
SREBF1-216ENST00000490796 HCFC1R1Q9NWW0 138 aa21.53■■□□□ 1.04
SREBF1-216ENST00000490796 DNMT3BQ9UBC3 853 aaKnown RBP21.53■■□□□ 1.04
SREBF1-216ENST00000490796 SIT1Q9Y3P8 196 aa21.53■■□□□ 1.04
SREBF1-216ENST00000490796 CITO14578 2027 aa21.52■■□□□ 1.04
SREBF1-216ENST00000490796 SLC26A4O43511 780 aa21.52■■□□□ 1.04
SREBF1-216ENST00000490796 BMP15O95972 392 aa21.52■■□□□ 1.04
SREBF1-216ENST00000490796 KRT18P05783 430 aaKnown RBP21.52■■□□□ 1.04
SREBF1-216ENST00000490796 GPC5P78333 572 aa21.52■■□□□ 1.04
SREBF1-216ENST00000490796 CACNB1Q02641 598 aaPredicted RBP21.52■■□□□ 1.04
SREBF1-216ENST00000490796 DHX8Q14562 1220 aaKnown RBP21.52■■□□□ 1.04
SREBF1-216ENST00000490796 CTXN3Q4LDR2 81 aa21.52■■□□□ 1.04
SREBF1-216ENST00000490796 SEZ6Q53EL9 994 aa21.52■■□□□ 1.04
SREBF1-216ENST00000490796 SLC8B1Q6J4K2 584 aa21.52■■□□□ 1.04
SREBF1-216ENST00000490796 PHLDB3Q6NSJ2 640 aa21.52■■□□□ 1.04
SREBF1-216ENST00000490796 ING5Q8WYH8 240 aa21.52■■□□□ 1.04
SREBF1-216ENST00000490796 RPP25Q9BUL9 199 aaKnown RBP21.52■■□□□ 1.04
SREBF1-216ENST00000490796 CYP4F11Q9HBI6 524 aa21.52■■□□□ 1.04
SREBF1-216ENST00000490796 USP34Q70CQ2 3546 aa21.51■■□□□ 1.03
SREBF1-216ENST00000490796 NPHP3-ACAD11A0A0J9YXS1 232 aa21.51■■□□□ 1.03
SREBF1-216ENST00000490796 PRR23AA6NEV1 266 aa21.51■■□□□ 1.03
SREBF1-216ENST00000490796 ABLIM1O14639 778 aa21.51■■□□□ 1.03
SREBF1-216ENST00000490796 FAM13AO94988 1023 aa21.51■■□□□ 1.03
SREBF1-216ENST00000490796 RHOP08100 348 aa21.51■■□□□ 1.03
SREBF1-216ENST00000490796 CLTAP09496 248 aa21.51■■□□□ 1.03
SREBF1-216ENST00000490796 PTPN2P17706 415 aa21.51■■□□□ 1.03
SREBF1-216ENST00000490796 LIG4P49917 911 aa21.51■■□□□ 1.03
SREBF1-216ENST00000490796 PFKPQ01813 784 aa21.51■■□□□ 1.03
SREBF1-216ENST00000490796 MCL1Q07820 350 aa21.51■■□□□ 1.03
SREBF1-216ENST00000490796 TMEM119Q4V9L6 283 aa21.51■■□□□ 1.03
SREBF1-216ENST00000490796 ZNF280DQ6N043 979 aa21.51■■□□□ 1.03
SREBF1-216ENST00000490796 ASCL5Q7RTU5 278 aa21.51■■□□□ 1.03
SREBF1-216ENST00000490796 GPBP1Q86WP2 473 aa21.51■■□□□ 1.03
SREBF1-216ENST00000490796 ELMOD1Q8N336 334 aa21.51■■□□□ 1.03
SREBF1-216ENST00000490796 PLEKHA5Q9HAU0 1116 aa21.51■■□□□ 1.03
SREBF1-216ENST00000490796 ODF2LQ9ULJ1 636 aa21.51■■□□□ 1.03
SREBF1-216ENST00000490796 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.51■■□□□ 1.03
SREBF1-216ENST00000490796 MYH11P35749 1972 aa21.5■■□□□ 1.03
SREBF1-216ENST00000490796 DCNP07585 359 aaKnown RBP21.5■■□□□ 1.03
SREBF1-216ENST00000490796 KYAT1Q16773 422 aa21.5■■□□□ 1.03
SREBF1-216ENST00000490796 SLC10A6Q3KNW5 377 aa21.5■■□□□ 1.03
SREBF1-216ENST00000490796 TPGS2Q68CL5 300 aa21.5■■□□□ 1.03
SREBF1-216ENST00000490796 HAUS6Q7Z4H7 955 aa21.5■■□□□ 1.03
SREBF1-216ENST00000490796 NPAS3Q8IXF0 933 aa21.5■■□□□ 1.03
SREBF1-216ENST00000490796 MYCT1Q8N699 235 aa21.5■■□□□ 1.03
SREBF1-216ENST00000490796 MCRS1Q96EZ8 462 aa21.5■■□□□ 1.03
SREBF1-216ENST00000490796 SUSD3Q96L08 255 aa21.5■■□□□ 1.03
SREBF1-216ENST00000490796 TBC1D32Q96NH3 1257 aa21.5■■□□□ 1.03
SREBF1-216ENST00000490796 KXD1Q9BQD3 176 aa21.5■■□□□ 1.03
SREBF1-216ENST00000490796 ZHX3Q9H4I2 956 aa21.5■■□□□ 1.03
SREBF1-216ENST00000490796 FBXL5Q9UKA1 691 aa21.5■■□□□ 1.03
SREBF1-216ENST00000490796 ARHGEF37A1IGU5 675 aa21.49■■□□□ 1.03
SREBF1-216ENST00000490796 WDR27A2RRH5 827 aa21.49■■□□□ 1.03
SREBF1-216ENST00000490796 HNRNPDLO14979 420 aaKnown RBP21.49■■□□□ 1.03
SREBF1-216ENST00000490796 XPOTO43592 962 aaKnown RBP21.49■■□□□ 1.03
SREBF1-216ENST00000490796 ABLIM3O94929 683 aa21.49■■□□□ 1.03
SREBF1-216ENST00000490796 CD2BP2O95400 341 aaKnown RBP21.49■■□□□ 1.03
SREBF1-216ENST00000490796 CXCL8P10145 99 aa21.49■■□□□ 1.03
SREBF1-216ENST00000490796 CPB1P15086 417 aa21.49■■□□□ 1.03
SREBF1-216ENST00000490796 ATF2P15336 505 aa21.49■■□□□ 1.03
SREBF1-216ENST00000490796 SCP2P22307 547 aa21.49■■□□□ 1.03
SREBF1-216ENST00000490796 NCKAP1LP55160 1127 aa21.49■■□□□ 1.03
SREBF1-216ENST00000490796 PPP2R3AQ06190 1150 aa21.49■■□□□ 1.03
SREBF1-216ENST00000490796 SNW1Q13573 536 aaKnown RBP21.49■■□□□ 1.03
SREBF1-216ENST00000490796 BRAPQ7Z569 592 aa21.49■■□□□ 1.03
SREBF1-216ENST00000490796 KIF12Q96FN5 646 aa21.49■■□□□ 1.03
SREBF1-216ENST00000490796 CORO1BQ9BR76 489 aa21.49■■□□□ 1.03
SREBF1-216ENST00000490796 GDE1Q9NZC3 331 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms