RNA–Protein interactions for RNA: ENST00000490668.5

SFPQ-210, Transcript of splicing factor proline and glutamine rich, human

TSL 2

Gene SFPQ, Length 434 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFPQ-210	ENST00000490668	PXMP2	Q9NR77	195 aa		4.88	□□□□□ -1.63
SFPQ-210	ENST00000490668	COL20A1	Q9P218	1284 aa		4.88	□□□□□ -1.63
SFPQ-210	ENST00000490668	ORC3	Q9UBD5	711 aa	Predicted RBP	4.88	□□□□□ -1.63
SFPQ-210	ENST00000490668	NOL7	Q9UMY1	257 aa	Known RBP	4.88	□□□□□ -1.63
SFPQ-210	ENST00000490668	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	4.88	□□□□□ -1.63
SFPQ-210	ENST00000490668	PCDHA9	Q9Y5H5	950 aa		4.88	□□□□□ -1.63
SFPQ-210	ENST00000490668	WASF2	Q9Y6W5	498 aa		4.88	□□□□□ -1.63
SFPQ-210	ENST00000490668	FRMPD4	Q14CM0	1322 aa		4.88	□□□□□ -1.63
SFPQ-210	ENST00000490668	PLXNA1	Q9UIW2	1896 aa		4.88	□□□□□ -1.63
SFPQ-210	ENST00000490668		A0A1B0GVC2	190 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	WDR64	B1ANS9	1081 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668		H3BRJ5	948 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	MEIS2	O14770	477 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	FIBP	O43427	364 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	JAK2	O60674	1132 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	ULK1	O75385	1050 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	STAM2	O75886	525 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	CTDNEP1	O95476	244 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	THBS1	P07996	1170 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	GJB1	P08034	283 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	RARB	P10826	455 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	CAPN2	P17655	700 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	CCND3	P30281	292 aa	Predicted RBP	4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	SREBF1	P36956	1147 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	GRK6	P43250	576 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	SOX10	P56693	466 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	MLLT1	Q03111	559 aa	Predicted RBP	4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	FAP	Q12884	760 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	ACVR2B	Q13705	512 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	LRRC32	Q14392	662 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	TTLL4	Q14679	1199 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	PGM5	Q15124	567 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	STXBP2	Q15833	593 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	ZNF697	Q5TEC3	545 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	USP17L6P	Q6QN14	398 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	OVCH2	Q7RTZ1	564 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	MAMDC2	Q7Z304	686 aa	Predicted RBP	4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	HDX	Q7Z353	690 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	GPR155	Q7Z3F1	870 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	SRGAP1	Q7Z6B7	1085 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	NLRX1	Q86UT6	975 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	TRIM59	Q8IWR1	403 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	CMIP	Q8IY22	773 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	BLID	Q8IZY5	108 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	DAGLB	Q8NCG7	672 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	FAM156A	Q8NDB6	213 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	U2AF1L4	Q8WU68	220 aa	Known RBP	4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	SCFD2	Q8WU76	684 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	CHTF18	Q8WVB6	975 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	DIO2	Q92813	273 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	C8orf76	Q96K31	380 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	DHRS1	Q96LJ7	313 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	CCDC138	Q96M89	665 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	PPM1M	Q96MI6	270 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	DEFB118	Q96PH6	123 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	TAAR1	Q96RJ0	339 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	SLC30A3	Q99726	388 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	ACO2	Q99798	780 aa	Known RBP	4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	XPNPEP3	Q9NQH7	507 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	PAK6	Q9NQU5	681 aa	Predicted RBP	4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	THG1L	Q9NWX6	298 aa	Known RBP	4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	ADAM30	Q9UKF2	790 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	FAM184B	Q9ULE4	1060 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	EMC9	Q9Y3B6	208 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	ASTN1	O14525	1302 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	LCT	P09848	1927 aa		4.87	□□□□□ -1.63
SFPQ-210	ENST00000490668	FRMPD3	Q5JV73	1810 aa		4.86	□□□□□ -1.63
SFPQ-210	ENST00000490668	KBTBD13	C9JR72	458 aa		4.86	□□□□□ -1.63
SFPQ-210	ENST00000490668		M0R3H8	397 aa		4.86	□□□□□ -1.63
SFPQ-210	ENST00000490668	RGS13	O14921	159 aa		4.86	□□□□□ -1.63
SFPQ-210	ENST00000490668	NKRF	O15226	690 aa	Known RBP eCLIP	4.86	□□□□□ -1.63
SFPQ-210	ENST00000490668	H2AFY	O75367	372 aa	Known RBP	4.86	□□□□□ -1.63
SFPQ-210	ENST00000490668	SNAI1	O95863	264 aa	Predicted RBP	4.86	□□□□□ -1.63
SFPQ-210	ENST00000490668	MMP1	P03956	469 aa		4.86	□□□□□ -1.63
SFPQ-210	ENST00000490668	ZNF865	P0CJ78	1059 aa	Predicted RBP	4.86	□□□□□ -1.63
SFPQ-210	ENST00000490668	MYCL	P12524	364 aa	Predicted RBP	4.86	□□□□□ -1.63
SFPQ-210	ENST00000490668	ATP2A2	P16615	1042 aa	Known RBP	4.86	□□□□□ -1.63
SFPQ-210	ENST00000490668	AKAP5	P24588	427 aa		4.86	□□□□□ -1.63
SFPQ-210	ENST00000490668	CHKA	P35790	457 aa		4.86	□□□□□ -1.63
SFPQ-210	ENST00000490668	KRT2	P35908	639 aa		4.86	□□□□□ -1.63
SFPQ-210	ENST00000490668	PTPN5	P54829	565 aa		4.86	□□□□□ -1.63
SFPQ-210	ENST00000490668	GFRA1	P56159	465 aa		4.86	□□□□□ -1.63
SFPQ-210	ENST00000490668	GPLD1	P80108	840 aa		4.86	□□□□□ -1.63
SFPQ-210	ENST00000490668	TNFAIP2	Q03169	654 aa		4.86	□□□□□ -1.63
SFPQ-210	ENST00000490668	CYP4F3	Q08477	520 aa		4.86	□□□□□ -1.63
SFPQ-210	ENST00000490668	MAP4K2	Q12851	820 aa		4.86	□□□□□ -1.63
SFPQ-210	ENST00000490668	SEMA5A	Q13591	1074 aa		4.86	□□□□□ -1.63
SFPQ-210	ENST00000490668	SLC9A5	Q14940	896 aa		4.86	□□□□□ -1.63
SFPQ-210	ENST00000490668	ATAT1	Q5SQI0	421 aa		4.86	□□□□□ -1.63
SFPQ-210	ENST00000490668	PRAMEF19	Q5SWL8	479 aa		4.86	□□□□□ -1.63
SFPQ-210	ENST00000490668	ARMC3	Q5W041	872 aa		4.86	□□□□□ -1.63
SFPQ-210	ENST00000490668	MZT2B	Q6NZ67	158 aa		4.86	□□□□□ -1.63
SFPQ-210	ENST00000490668	KCNV1	Q6PIU1	500 aa		4.86	□□□□□ -1.63
SFPQ-210	ENST00000490668	HFE2	Q6ZVN8	426 aa		4.86	□□□□□ -1.63
SFPQ-210	ENST00000490668	SYDE1	Q6ZW31	735 aa	Predicted RBP	4.86	□□□□□ -1.63
SFPQ-210	ENST00000490668	GET4	Q7L5D6	327 aa	Predicted RBP	4.86	□□□□□ -1.63
SFPQ-210	ENST00000490668	LYSMD3	Q7Z3D4	306 aa		4.86	□□□□□ -1.63
SFPQ-210	ENST00000490668	RAB44	Q7Z6P3	723 aa	Predicted RBP	4.86	□□□□□ -1.63
SFPQ-210	ENST00000490668	DDX53	Q86TM3	631 aa	Known RBP	4.86	□□□□□ -1.63
SFPQ-210	ENST00000490668	TLK2	Q86UE8	772 aa		4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms