RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 KIF12Q96FN5 646 aa21.52■■□□□ 1.04
SMC4-222ENST00000490207 MRPL44Q9H9J2 332 aaKnown RBP21.52■■□□□ 1.04
SMC4-222ENST00000490207 RPF1Q9H9Y2 349 aaKnown RBP21.52■■□□□ 1.04
SMC4-222ENST00000490207 ZDHHC7Q9NXF8 308 aa21.52■■□□□ 1.04
SMC4-222ENST00000490207 MTRRQ9UBK8 725 aa21.52■■□□□ 1.04
SMC4-222ENST00000490207 NUB1Q9Y5A7 615 aa21.52■■□□□ 1.04
SMC4-222ENST00000490207 ANKRD63C9JTQ0 380 aa21.51■■□□□ 1.03
SMC4-222ENST00000490207 PPP1R37O75864 691 aa21.51■■□□□ 1.03
SMC4-222ENST00000490207 ENOX2Q16206 610 aaKnown RBP21.51■■□□□ 1.03
SMC4-222ENST00000490207 PTPN21Q16825 1174 aa21.51■■□□□ 1.03
SMC4-222ENST00000490207 CYP26C1Q6V0L0 522 aa21.51■■□□□ 1.03
SMC4-222ENST00000490207 KCNG4Q8TDN1 519 aa21.51■■□□□ 1.03
SMC4-222ENST00000490207 SMG7Q92540 1137 aaKnown RBP21.51■■□□□ 1.03
SMC4-222ENST00000490207 EDAQ92838 391 aa21.51■■□□□ 1.03
SMC4-222ENST00000490207 RHOBTB2Q9BYZ6 727 aa21.51■■□□□ 1.03
SMC4-222ENST00000490207 TBC1D7Q9P0N9 293 aa21.51■■□□□ 1.03
SMC4-222ENST00000490207 USTQ9Y2C2 406 aa21.51■■□□□ 1.03
SMC4-222ENST00000490207 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.51■■□□□ 1.03
SMC4-222ENST00000490207 FRMD3A2A2Y4 597 aa21.5■■□□□ 1.03
SMC4-222ENST00000490207 LACTBL1A8MY62 500 aa21.5■■□□□ 1.03
SMC4-222ENST00000490207 TISP43B9A030 160 aa21.5■■□□□ 1.03
SMC4-222ENST00000490207 ADAM12O43184 909 aa21.5■■□□□ 1.03
SMC4-222ENST00000490207 GCNT3O95395 438 aa21.5■■□□□ 1.03
SMC4-222ENST00000490207 MCM4P33991 863 aa21.5■■□□□ 1.03
SMC4-222ENST00000490207 ZXDAP98168 799 aa21.5■■□□□ 1.03
SMC4-222ENST00000490207 E2F4Q16254 413 aa21.5■■□□□ 1.03
SMC4-222ENST00000490207 LIN9Q5TKA1 542 aa21.5■■□□□ 1.03
SMC4-222ENST00000490207 ANKS3Q6ZW76 656 aa21.5■■□□□ 1.03
SMC4-222ENST00000490207 ZNF707Q96C28 371 aaPredicted RBP21.5■■□□□ 1.03
SMC4-222ENST00000490207 TNMDQ9H2S6 317 aa21.5■■□□□ 1.03
SMC4-222ENST00000490207 OLFML3Q9NRN5 406 aa21.5■■□□□ 1.03
SMC4-222ENST00000490207 RAPGEFL1Q9UHV5 662 aa21.5■■□□□ 1.03
SMC4-222ENST00000490207 CPSF3Q9UKF6 684 aaKnown RBP21.5■■□□□ 1.03
SMC4-222ENST00000490207 UBQLN1Q9UMX0 589 aaKnown RBP21.5■■□□□ 1.03
SMC4-222ENST00000490207 CLUHO75153 1309 aa21.5■■□□□ 1.03
SMC4-222ENST00000490207 SYN3O14994 580 aa21.49■■□□□ 1.03
SMC4-222ENST00000490207 XPOTO43592 962 aaKnown RBP21.49■■□□□ 1.03
SMC4-222ENST00000490207 ZMYND10O75800 440 aa21.49■■□□□ 1.03
SMC4-222ENST00000490207 PAPLNO95428 1278 aa21.49■■□□□ 1.03
SMC4-222ENST00000490207 OR1D2P34982 312 aa21.49■■□□□ 1.03
SMC4-222ENST00000490207 L1TD1Q5T7N2 865 aaKnown RBP21.49■■□□□ 1.03
SMC4-222ENST00000490207 ATL3Q6DD88 541 aa21.49■■□□□ 1.03
SMC4-222ENST00000490207 ADALQ6DHV7 355 aa21.49■■□□□ 1.03
SMC4-222ENST00000490207 SLFN12LQ6IEE8 588 aa21.49■■□□□ 1.03
SMC4-222ENST00000490207 SHC4Q6S5L8 630 aa21.49■■□□□ 1.03
SMC4-222ENST00000490207 ZDHHC14Q8IZN3 488 aa21.49■■□□□ 1.03
SMC4-222ENST00000490207 PLCD3Q8N3E9 789 aa21.49■■□□□ 1.03
SMC4-222ENST00000490207 TMEM130Q8N3G9 435 aa21.49■■□□□ 1.03
SMC4-222ENST00000490207 STAMQ92783 540 aa21.49■■□□□ 1.03
SMC4-222ENST00000490207 DHX58Q96C10 678 aa21.49■■□□□ 1.03
SMC4-222ENST00000490207 ACSF2Q96CM8 615 aaPredicted RBP21.49■■□□□ 1.03
SMC4-222ENST00000490207 STRA6Q9BX79 667 aa21.49■■□□□ 1.03
SMC4-222ENST00000490207 CUEDC2Q9H467 287 aa21.49■■□□□ 1.03
SMC4-222ENST00000490207 PIDD1Q9HB75 910 aa21.49■■□□□ 1.03
SMC4-222ENST00000490207 PANK4Q9NVE7 773 aa21.49■■□□□ 1.03
SMC4-222ENST00000490207 EXOC7Q9UPT5 735 aa21.49■■□□□ 1.03
SMC4-222ENST00000490207 BACE2Q9Y5Z0 518 aa21.49■■□□□ 1.03
SMC4-222ENST00000490207 CDY1Q9Y6F8 540 aa21.49■■□□□ 1.03
SMC4-222ENST00000490207 TECTAO75443 2155 aa21.48■■□□□ 1.03
SMC4-222ENST00000490207 CYP3A5P20815 502 aa21.48■■□□□ 1.03
SMC4-222ENST00000490207 LRPAP1P30533 357 aa21.48■■□□□ 1.03
SMC4-222ENST00000490207 ALCAMQ13740 583 aa21.48■■□□□ 1.03
SMC4-222ENST00000490207 RAB33AQ14088 237 aa21.48■■□□□ 1.03
SMC4-222ENST00000490207 VARS2Q5ST30 1063 aaKnown RBP21.48■■□□□ 1.03
SMC4-222ENST00000490207 AXDND1Q5T1B0 1012 aaPredicted RBP21.48■■□□□ 1.03
SMC4-222ENST00000490207 OTOP3Q7RTS5 596 aa21.48■■□□□ 1.03
SMC4-222ENST00000490207 CD302Q8IX05 232 aa21.48■■□□□ 1.03
SMC4-222ENST00000490207 FAM212AQ96EL1 285 aa21.48■■□□□ 1.03
SMC4-222ENST00000490207 SUSD3Q96L08 255 aa21.48■■□□□ 1.03
SMC4-222ENST00000490207 ACCSQ96QU6 501 aa21.48■■□□□ 1.03
SMC4-222ENST00000490207 TSPAN18Q96SJ8 248 aa21.48■■□□□ 1.03
SMC4-222ENST00000490207 PRKD2Q9BZL6 878 aa21.48■■□□□ 1.03
SMC4-222ENST00000490207 LRRC27Q9C0I9 530 aa21.48■■□□□ 1.03
SMC4-222ENST00000490207 IKZF4Q9H2S9 585 aa21.48■■□□□ 1.03
SMC4-222ENST00000490207 WDR6Q9NNW5 1121 aaKnown RBP21.48■■□□□ 1.03
SMC4-222ENST00000490207 AGO2Q9UKV8 859 aaKnown RBP21.48■■□□□ 1.03
SMC4-222ENST00000490207 HCN4Q9Y3Q4 1203 aa21.48■■□□□ 1.03
SMC4-222ENST00000490207 STYXL1Q9Y6J8 313 aa21.48■■□□□ 1.03
SMC4-222ENST00000490207 TSC2P49815 1807 aa21.48■■□□□ 1.03
SMC4-222ENST00000490207 C8AP07357 584 aa21.47■■□□□ 1.03
SMC4-222ENST00000490207 ADRB2P07550 413 aa21.47■■□□□ 1.03
SMC4-222ENST00000490207 ME1P48163 572 aa21.47■■□□□ 1.03
SMC4-222ENST00000490207 ACOT2P49753 483 aa21.47■■□□□ 1.03
SMC4-222ENST00000490207 CASP5P51878 434 aa21.47■■□□□ 1.03
SMC4-222ENST00000490207 DNM1Q05193 864 aaKnown RBP21.47■■□□□ 1.03
SMC4-222ENST00000490207 ZBTB6Q15916 424 aa21.47■■□□□ 1.03
SMC4-222ENST00000490207 PPM1LQ5SGD2 360 aa21.47■■□□□ 1.03
SMC4-222ENST00000490207 JADE1Q6IE81 842 aa21.47■■□□□ 1.03
SMC4-222ENST00000490207 RSPO2Q6UXX9 243 aaPredicted RBP21.47■■□□□ 1.03
SMC4-222ENST00000490207 TRIM67Q6ZTA4 783 aa21.47■■□□□ 1.03
SMC4-222ENST00000490207 CCDC65Q8IXS2 484 aa21.47■■□□□ 1.03
SMC4-222ENST00000490207 POMGNT1Q8WZA1 660 aa21.47■■□□□ 1.03
SMC4-222ENST00000490207 KBTBD4Q9NVX7 518 aa21.47■■□□□ 1.03
SMC4-222ENST00000490207 CFAP45Q9UL16 551 aa21.47■■□□□ 1.03
SMC4-222ENST00000490207 PCDHB13Q9Y5F0 798 aa21.47■■□□□ 1.03
SMC4-222ENST00000490207 TRIOO75962 3097 aa21.47■■□□□ 1.03
SMC4-222ENST00000490207 GUCY2FP51841 1108 aa21.46■■□□□ 1.03
SMC4-222ENST00000490207 SIGLEC14Q08ET2 396 aa21.46■■□□□ 1.03
SMC4-222ENST00000490207 KCNA1Q09470 495 aa21.46■■□□□ 1.03
SMC4-222ENST00000490207 IQUBQ8NA54 791 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms