RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 BRF2Q9HAW0 419 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 JPH1Q9HDC5 661 aaPredicted RBP3.43□□□□□ -1.86
UBXN4-208ENST00000490163 ATP8A2Q9NTI2 1148 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 SLC39A10Q9ULF5 831 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 TMEM94Q12767 1356 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 TNIKQ9UKE5 1360 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 STXBP3O00186 592 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 NPHS1O60500 1241 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 SOAT2O75908 522 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 LRG1P02750 347 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 FYNP06241 537 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 BTF3P20290 206 aaKnown RBP3.42□□□□□ -1.86
UBXN4-208ENST00000490163 PSMB10P40306 273 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 CAP1Q01518 475 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 PPP2R5DQ14738 602 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 MAPKAPK3Q16644 382 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 CT83Q5H943 113 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 MUM1L1Q5H9M0 696 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 CCDC30Q5VVM6 783 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 FAAH2Q6GMR7 532 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 MILR1Q7Z6M3 343 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 PDSS2Q86YH6 399 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 UNC5BQ8IZJ1 945 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 NGEFQ8N5V2 710 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 ESX1Q8N693 406 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 HDAC10Q969S8 669 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 C18orf8Q96DM3 657 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 UBL7Q96S82 380 aaPredicted RBP3.42□□□□□ -1.86
UBXN4-208ENST00000490163 NUDT22Q9BRQ3 303 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 MRPL9Q9BYD2 267 aaKnown RBP3.42□□□□□ -1.86
UBXN4-208ENST00000490163 ZNF518BQ9C0D4 1074 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 KCNK9Q9NPC2 374 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 RBM12Q9NTZ6 932 aaKnown RBP3.42□□□□□ -1.86
UBXN4-208ENST00000490163 DACT1Q9NYF0 836 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 CEP72Q9P209 647 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 LRFN1Q9P244 771 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 U3KQE9 123 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 FYCO1Q9BQS8 1478 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 ABCA9Q8IUA7 1624 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 WNT10BO00744 389 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 GFPT2O94808 682 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 MX2P20592 715 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 PRDX5P30044 214 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 MAPK4P31152 587 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 CCT4P50991 539 aaKnown RBP3.42□□□□□ -1.86
UBXN4-208ENST00000490163 RAD23AP54725 363 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 KIF23Q02241 960 aaPredicted RBP3.42□□□□□ -1.86
UBXN4-208ENST00000490163 G3BP1Q13283 466 aaKnown RBP eCLIP3.42□□□□□ -1.866e-8■□□□□ 10.3
UBXN4-208ENST00000490163 ATP1A4Q13733 1029 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 RNFT1Q5M7Z0 435 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 TTC38Q5R3I4 469 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 CDC37L1Q7L3B6 337 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 NBPF11Q86T75 865 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 TRIM48Q8IWZ4 208 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 SPACA3Q8IXA5 215 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 CDYL2Q8N8U2 506 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 NUP133Q8WUM0 1156 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 WDR24Q96S15 920 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 BTBD2Q9BX70 525 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 QRSL1Q9H0R6 528 aaKnown RBP3.42□□□□□ -1.86
UBXN4-208ENST00000490163 CCDC68Q9H2F9 335 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 SERINC1Q9NRX5 453 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 SLC25A10Q9UBX3 287 aaPredicted RBP3.42□□□□□ -1.86
UBXN4-208ENST00000490163 KCNG1Q9UIX4 513 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 CDC42BPAQ5VT25 1732 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 PREX2Q70Z35 1606 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 MAPKBP1O60336 1514 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 ARAP3Q8WWN8 1544 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 PITPNM2Q9BZ72 1349 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 TIAM1Q13009 1591 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 CCDC188H7C350 402 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 SLC43A1O75387 559 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 IFNAR1P17181 557 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 PTPN1P18031 435 aaKnown RBP3.42□□□□□ -1.86
UBXN4-208ENST00000490163 PAPOLAP51003 745 aaKnown RBP3.42□□□□□ -1.86
UBXN4-208ENST00000490163 CLCN2P51788 898 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 KIF11P52732 1056 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 BECN1Q14457 450 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 ACAD10Q6JQN1 1059 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 GAREM2Q75VX8 874 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.42□□□□□ -1.86
UBXN4-208ENST00000490163 KSR1Q8IVT5 923 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 ANKRD52Q8NB46 1076 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 CPA5Q8WXQ8 436 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 BCO1Q9HAY6 547 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 PPP1R14DQ9NXH3 145 aa3.42□□□□□ -1.86
UBXN4-208ENST00000490163 FLT1P17948 1338 aa3.41□□□□□ -1.86
UBXN4-208ENST00000490163 KIAA1324LA8MWY0 1029 aaPredicted RBP3.41□□□□□ -1.86
UBXN4-208ENST00000490163 AXIN1O15169 862 aa3.41□□□□□ -1.86
UBXN4-208ENST00000490163 MBD4O95243 580 aa3.41□□□□□ -1.86
UBXN4-208ENST00000490163 LGALS4P56470 323 aa3.41□□□□□ -1.86
UBXN4-208ENST00000490163 SLC45A4Q5BKX6 768 aa3.41□□□□□ -1.86
UBXN4-208ENST00000490163 SFRP5Q5T4F7 317 aa3.41□□□□□ -1.86
UBXN4-208ENST00000490163 ADCY4Q8NFM4 1077 aa3.41□□□□□ -1.86
UBXN4-208ENST00000490163 ZDHHC15Q96MV8 337 aa3.41□□□□□ -1.86
UBXN4-208ENST00000490163 FTSJ1Q9UET6 329 aa3.41□□□□□ -1.86
UBXN4-208ENST00000490163 EVLQ9UI08 416 aaPredicted RBP3.41□□□□□ -1.86
UBXN4-208ENST00000490163 CDC23Q9UJX2 597 aa3.41□□□□□ -1.86
UBXN4-208ENST00000490163 ABCC2Q92887 1545 aa3.41□□□□□ -1.86
UBXN4-208ENST00000490163 ITSN2Q9NZM3 1697 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms