RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 IGSF22Q8N9C0 903 aa17.4■□□□□ 0.38
PLOD3-216ENST00000489927 SUMF1Q8NBK3 374 aa17.4■□□□□ 0.38
PLOD3-216ENST00000489927 SNX29Q8TEQ0 813 aa17.4■□□□□ 0.38
PLOD3-216ENST00000489927 TARS2Q9BW92 718 aaKnown RBP17.4■□□□□ 0.38
PLOD3-216ENST00000489927 MRPL4Q9BYD3 311 aaKnown RBP17.4■□□□□ 0.38
PLOD3-216ENST00000489927 SLC38A7Q9NVC3 462 aa17.4■□□□□ 0.38
PLOD3-216ENST00000489927 FBXO4Q9UKT5 387 aa17.4■□□□□ 0.38
PLOD3-216ENST00000489927 NOL7Q9UMY1 257 aaKnown RBP17.4■□□□□ 0.38
PLOD3-216ENST00000489927 MIA3Q5JRA6 1907 aa17.39■□□□□ 0.37
PLOD3-216ENST00000489927 PP2D1A8MPX8 630 aa17.39■□□□□ 0.37
PLOD3-216ENST00000489927 PRRG1O14668 218 aa17.39■□□□□ 0.37
PLOD3-216ENST00000489927 TBC1D4O60343 1298 aa17.39■□□□□ 0.37
PLOD3-216ENST00000489927 KINO60870 393 aaKnown RBP17.39■□□□□ 0.37
PLOD3-216ENST00000489927 HIP1RO75146 1068 aa17.39■□□□□ 0.37
PLOD3-216ENST00000489927 ATF2P15336 505 aa17.39■□□□□ 0.37
PLOD3-216ENST00000489927 PTPN2P17706 415 aa17.39■□□□□ 0.37
PLOD3-216ENST00000489927 ELF1P32519 619 aa17.39■□□□□ 0.37
PLOD3-216ENST00000489927 DMP1Q13316 513 aaPredicted RBP17.39■□□□□ 0.37
PLOD3-216ENST00000489927 TANGO2Q6ICL3 276 aa17.39■□□□□ 0.37
PLOD3-216ENST00000489927 C18orf25Q96B23 403 aaPredicted RBP17.39■□□□□ 0.37
PLOD3-216ENST00000489927 CORO1BQ9BR76 489 aa17.39■□□□□ 0.37
PLOD3-216ENST00000489927 RUSC1Q9BVN2 902 aa17.39■□□□□ 0.37
PLOD3-216ENST00000489927 TMEM134Q9H6X4 195 aa17.39■□□□□ 0.37
PLOD3-216ENST00000489927 CYP4F11Q9HBI6 524 aa17.39■□□□□ 0.37
PLOD3-216ENST00000489927 KMT5AQ9NQR1 393 aa17.39■□□□□ 0.37
PLOD3-216ENST00000489927 ARHGAP28Q9P2N2 729 aa17.39■□□□□ 0.37
PLOD3-216ENST00000489927 DNM3Q9UQ16 869 aa17.39■□□□□ 0.37
PLOD3-216ENST00000489927 FANCMQ8IYD8 2048 aa17.38■□□□□ 0.37
PLOD3-216ENST00000489927 CACNA1IQ9P0X4 2223 aa17.38■□□□□ 0.37
PLOD3-216ENST00000489927 ABLIM1O14639 778 aa17.38■□□□□ 0.37
PLOD3-216ENST00000489927 SYN3O14994 580 aa17.38■□□□□ 0.37
PLOD3-216ENST00000489927 MEFVO15553 781 aaPredicted RBP17.38■□□□□ 0.37
PLOD3-216ENST00000489927 SEC24AO95486 1093 aa17.38■□□□□ 0.37
PLOD3-216ENST00000489927 NEFLP07196 543 aa17.38■□□□□ 0.37
PLOD3-216ENST00000489927 MCF2P10911 925 aa17.38■□□□□ 0.37
PLOD3-216ENST00000489927 KCNE1P15382 129 aa17.38■□□□□ 0.37
PLOD3-216ENST00000489927 PROZP22891 400 aa17.38■□□□□ 0.37
PLOD3-216ENST00000489927 TARSP26639 723 aaKnown RBP17.38■□□□□ 0.37
PLOD3-216ENST00000489927 TOB1P50616 345 aaPredicted RBP17.38■□□□□ 0.37
PLOD3-216ENST00000489927 CSTF1Q05048 431 aaKnown RBP17.38■□□□□ 0.37
PLOD3-216ENST00000489927 MAPK7Q13164 816 aa17.38■□□□□ 0.37
PLOD3-216ENST00000489927 PTGDRQ13258 359 aa17.38■□□□□ 0.37
PLOD3-216ENST00000489927 MRPL58Q14197 206 aaKnown RBP17.38■□□□□ 0.37
PLOD3-216ENST00000489927 PRSS36Q5K4E3 855 aa17.38■□□□□ 0.37
PLOD3-216ENST00000489927 ZBTB41Q5SVQ8 909 aa17.38■□□□□ 0.37
PLOD3-216ENST00000489927 TCEAL8Q8IYN2 117 aa17.38■□□□□ 0.37
PLOD3-216ENST00000489927 ELSPBP1Q96BH3 223 aa17.38■□□□□ 0.37
PLOD3-216ENST00000489927 TCEAL4Q96EI5 215 aa17.38■□□□□ 0.37
PLOD3-216ENST00000489927 DRC1Q96MC2 740 aa17.38■□□□□ 0.37
PLOD3-216ENST00000489927 ACAP3Q96P50 834 aa17.38■□□□□ 0.37
PLOD3-216ENST00000489927 TCHPQ9BT92 498 aa17.38■□□□□ 0.37
PLOD3-216ENST00000489927 HEBP1Q9NRV9 189 aa17.38■□□□□ 0.37
PLOD3-216ENST00000489927 CNTN3Q9P232 1028 aa17.38■□□□□ 0.37
PLOD3-216ENST00000489927 NUB1Q9Y5A7 615 aa17.38■□□□□ 0.37
PLOD3-216ENST00000489927 PCDHB6Q9Y5E3 794 aa17.38■□□□□ 0.37
PLOD3-216ENST00000489927 STK24Q9Y6E0 443 aa17.38■□□□□ 0.37
PLOD3-216ENST00000489927 PATJQ8NI35 1801 aa17.37■□□□□ 0.37
PLOD3-216ENST00000489927 TRIP11Q15643 1979 aa17.37■□□□□ 0.37
PLOD3-216ENST00000489927 SHISA7A6NL88 538 aa17.37■□□□□ 0.37
PLOD3-216ENST00000489927 H7C4K7 107 aa17.37■□□□□ 0.37
PLOD3-216ENST00000489927 HARSP12081 509 aaKnown RBP17.37■□□□□ 0.37
PLOD3-216ENST00000489927 FCARP24071 287 aa17.37■□□□□ 0.37
PLOD3-216ENST00000489927 U2AF2P26368 475 aaKnown RBP eCLIP17.37■□□□□ 0.37
PLOD3-216ENST00000489927 CDC25AP30304 524 aa17.37■□□□□ 0.37
PLOD3-216ENST00000489927 RPL9P32969 192 aaKnown RBP17.37■□□□□ 0.37
PLOD3-216ENST00000489927 CCR2P41597 374 aa17.37■□□□□ 0.37
PLOD3-216ENST00000489927 MAGEA9P43362 315 aa17.37■□□□□ 0.37
PLOD3-216ENST00000489927 HMGN5P82970 282 aaKnown RBP17.37■□□□□ 0.37
PLOD3-216ENST00000489927 IL17AQ16552 155 aa17.37■□□□□ 0.37
PLOD3-216ENST00000489927 KRT79Q5XKE5 535 aa17.37■□□□□ 0.37
PLOD3-216ENST00000489927 RINT1Q6NUQ1 792 aa17.37■□□□□ 0.37
PLOD3-216ENST00000489927 MPZL3Q6UWV2 235 aa17.37■□□□□ 0.37
PLOD3-216ENST00000489927 ZNF852Q6ZMS4 543 aa17.37■□□□□ 0.37
PLOD3-216ENST00000489927 FAM184AQ8NB25 1140 aa17.37■□□□□ 0.37
PLOD3-216ENST00000489927 CLDN23Q96B33 292 aa17.37■□□□□ 0.37
PLOD3-216ENST00000489927 NELL2Q99435 816 aa17.37■□□□□ 0.37
PLOD3-216ENST00000489927 RAB34Q9BZG1 259 aa17.37■□□□□ 0.37
PLOD3-216ENST00000489927 FBXL5Q9UKA1 691 aa17.37■□□□□ 0.37
PLOD3-216ENST00000489927 RBM19Q9Y4C8 960 aaKnown RBP17.37■□□□□ 0.37
PLOD3-216ENST00000489927 INSL5Q9Y5Q6 135 aa17.37■□□□□ 0.37
PLOD3-216ENST00000489927 OTOGLQ3ZCN5 2332 aa17.37■□□□□ 0.37
PLOD3-216ENST00000489927 SFI1A8K8P3 1242 aa17.36■□□□□ 0.37
PLOD3-216ENST00000489927 NRG2O14511 850 aaPredicted RBP17.36■□□□□ 0.37
PLOD3-216ENST00000489927 SPTLC1O15269 473 aa17.36■□□□□ 0.37
PLOD3-216ENST00000489927 SLC16A4O15374 487 aa17.36■□□□□ 0.37
PLOD3-216ENST00000489927 EIF5BO60841 1220 aaKnown RBP17.36■□□□□ 0.37
PLOD3-216ENST00000489927 FZD5Q13467 585 aa17.36■□□□□ 0.37
PLOD3-216ENST00000489927 CTXN3Q4LDR2 81 aa17.36■□□□□ 0.37
PLOD3-216ENST00000489927 FAM78AQ5JUQ0 283 aa17.36■□□□□ 0.37
PLOD3-216ENST00000489927 C1orf186Q6ZWK4 172 aa17.36■□□□□ 0.37
PLOD3-216ENST00000489927 DGLUCYQ7Z3D6 616 aa17.36■□□□□ 0.37
PLOD3-216ENST00000489927 KCNK18Q7Z418 384 aa17.36■□□□□ 0.37
PLOD3-216ENST00000489927 ZBTB45Q96K62 511 aaPredicted RBP17.36■□□□□ 0.37
PLOD3-216ENST00000489927 SUSD3Q96L08 255 aa17.36■□□□□ 0.37
PLOD3-216ENST00000489927 PCDHGA2Q9Y5H1 932 aa17.36■□□□□ 0.37
PLOD3-216ENST00000489927 MED19A0JLT2 244 aaPredicted RBP17.35■□□□□ 0.37
PLOD3-216ENST00000489927 NCAM2O15394 837 aa17.35■□□□□ 0.37
PLOD3-216ENST00000489927 MICAL2O94851 1124 aa17.35■□□□□ 0.37
PLOD3-216ENST00000489927 RPS9P46781 194 aaKnown RBP17.35■□□□□ 0.37
PLOD3-216ENST00000489927 GRM2Q14416 872 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms