RNA–Protein interactions for RNA: ENST00000489852.1

SDHAF3-204, Transcript of succinate dehydrogenase complex assembly factor 3, humanhuman

TSL 3

Gene SDHAF3, Length 360 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3-204ENST00000489852 GPR88Q9GZN0 384 aa16.25■□□□□ 0.19
SDHAF3-204ENST00000489852 GLT8D2Q9H1C3 349 aa16.25■□□□□ 0.19
SDHAF3-204ENST00000489852 PARP2Q9UGN5 583 aa16.25■□□□□ 0.19
SDHAF3-204ENST00000489852 U3KPZ7 1027 aaPredicted RBP16.25■□□□□ 0.19
SDHAF3-204ENST00000489852 APC2O95996 2303 aa16.25■□□□□ 0.19
SDHAF3-204ENST00000489852 ABCA7Q8IZY2 2146 aa16.25■□□□□ 0.19
SDHAF3-204ENST00000489852 URB1O60287 2271 aaKnown RBP16.25■□□□□ 0.19
SDHAF3-204ENST00000489852 THADAQ6YHU6 1953 aa16.24■□□□□ 0.19
SDHAF3-204ENST00000489852 TSPAN1O60635 241 aa16.24■□□□□ 0.19
SDHAF3-204ENST00000489852 APBB3O95704 486 aa16.24■□□□□ 0.19
SDHAF3-204ENST00000489852 CYP21A2P08686 494 aa16.24■□□□□ 0.19
SDHAF3-204ENST00000489852 ENGP17813 658 aa16.24■□□□□ 0.19
SDHAF3-204ENST00000489852 FGFR3P22607 806 aa16.24■□□□□ 0.19
SDHAF3-204ENST00000489852 DHPSP49366 369 aaPredicted RBP16.24■□□□□ 0.19
SDHAF3-204ENST00000489852 LAMTOR4Q0VGL1 99 aa16.24■□□□□ 0.19
SDHAF3-204ENST00000489852 GRSF1Q12849 480 aaKnown RBP eCLIP16.24■□□□□ 0.19
SDHAF3-204ENST00000489852 ARHGAP29Q52LW3 1261 aa16.24■□□□□ 0.19
SDHAF3-204ENST00000489852 HDDC3Q8N4P3 179 aa16.24■□□□□ 0.19
SDHAF3-204ENST00000489852 ADAMTS14Q8WXS8 1223 aa16.24■□□□□ 0.19
SDHAF3-204ENST00000489852 ZNF512Q96ME7 567 aaPredicted RBP16.24■□□□□ 0.19
SDHAF3-204ENST00000489852 CYP4F11Q9HBI6 524 aa16.24■□□□□ 0.19
SDHAF3-204ENST00000489852 EBF1Q9UH73 591 aa16.24■□□□□ 0.19
SDHAF3-204ENST00000489852 BACE2Q9Y5Z0 518 aa16.24■□□□□ 0.19
SDHAF3-204ENST00000489852 HECTD1Q9ULT8 2610 aa16.24■□□□□ 0.19
SDHAF3-204ENST00000489852 ATG2BQ96BY7 2078 aa16.23■□□□□ 0.19
SDHAF3-204ENST00000489852 CCDC69A6NI79 296 aa16.23■□□□□ 0.19
SDHAF3-204ENST00000489852 E7EWF7 191 aa16.23■□□□□ 0.19
SDHAF3-204ENST00000489852 HIP1O00291 1037 aa16.23■□□□□ 0.19
SDHAF3-204ENST00000489852 RNF40O75150 1001 aa16.23■□□□□ 0.19
SDHAF3-204ENST00000489852 HNRNPUQ00839 825 aaKnown RBP eCLIP16.23■□□□□ 0.19
SDHAF3-204ENST00000489852 TMTC3Q6ZXV5 915 aa16.23■□□□□ 0.19
SDHAF3-204ENST00000489852 GPIHBP1Q8IV16 184 aa16.23■□□□□ 0.19
SDHAF3-204ENST00000489852 RNF149Q8NC42 400 aa16.23■□□□□ 0.19
SDHAF3-204ENST00000489852 PSPC1Q8WXF1 523 aaKnown RBP16.23■□□□□ 0.19
SDHAF3-204ENST00000489852 UNC45AQ9H3U1 944 aa16.23■□□□□ 0.19
SDHAF3-204ENST00000489852 ZMYM2Q9UBW7 1377 aa16.23■□□□□ 0.19
SDHAF3-204ENST00000489852 PLXNB3Q9ULL4 1909 aa16.23■□□□□ 0.19
SDHAF3-204ENST00000489852 MYO18BQ8IUG5 2567 aa16.23■□□□□ 0.19
SDHAF3-204ENST00000489852 ZNF462Q96JM2 2506 aa16.22■□□□□ 0.19
SDHAF3-204ENST00000489852 CCER2I3L3R5 266 aa16.22■□□□□ 0.19
SDHAF3-204ENST00000489852 GAS7O60861 476 aa16.22■□□□□ 0.19
SDHAF3-204ENST00000489852 ABLIM3O94929 683 aa16.22■□□□□ 0.19
SDHAF3-204ENST00000489852 DGKEP52429 567 aa16.22■□□□□ 0.19
SDHAF3-204ENST00000489852 ROR1Q01973 937 aa16.22■□□□□ 0.19
SDHAF3-204ENST00000489852 TNK2Q07912 1038 aa16.22■□□□□ 0.19
SDHAF3-204ENST00000489852 HNRNPDQ14103 355 aaKnown RBP16.22■□□□□ 0.19
SDHAF3-204ENST00000489852 PCBP1Q15365 356 aaKnown RBP eCLIP16.22■□□□□ 0.19
SDHAF3-204ENST00000489852 USP39Q53GS9 565 aaKnown RBP16.22■□□□□ 0.19
SDHAF3-204ENST00000489852 TMEM196Q5HYL7 178 aa16.22■□□□□ 0.19
SDHAF3-204ENST00000489852 FSTL4Q6MZW2 842 aa16.22■□□□□ 0.19
SDHAF3-204ENST00000489852 ANKS3Q6ZW76 656 aa16.22■□□□□ 0.19
SDHAF3-204ENST00000489852 RAB11FIP4Q86YS3 637 aa16.22■□□□□ 0.19
SDHAF3-204ENST00000489852 TCEAL8Q8IYN2 117 aa16.22■□□□□ 0.19
SDHAF3-204ENST00000489852 LEMD2Q8NC56 503 aa16.22■□□□□ 0.19
SDHAF3-204ENST00000489852 SLC7A3Q8WY07 619 aa16.22■□□□□ 0.19
SDHAF3-204ENST00000489852 TMEM143Q96AN5 459 aa16.22■□□□□ 0.19
SDHAF3-204ENST00000489852 ASAH2Q9NR71 780 aa16.22■□□□□ 0.19
SDHAF3-204ENST00000489852 INSL5Q9Y5Q6 135 aa16.22■□□□□ 0.19
SDHAF3-204ENST00000489852 KIF26AQ9ULI4 1882 aaPredicted RBP16.22■□□□□ 0.19
SDHAF3-204ENST00000489852 A0A087WV48 116 aa16.21■□□□□ 0.19
SDHAF3-204ENST00000489852 DPYSL4O14531 572 aa16.21■□□□□ 0.19
SDHAF3-204ENST00000489852 ATF2P15336 505 aa16.21■□□□□ 0.19
SDHAF3-204ENST00000489852 ATXN3P54252 364 aaPredicted RBP16.21■□□□□ 0.19
SDHAF3-204ENST00000489852 PLA2G4FQ68DD2 849 aa16.21■□□□□ 0.19
SDHAF3-204ENST00000489852 ANO5Q75V66 913 aa16.21■□□□□ 0.19
SDHAF3-204ENST00000489852 MIER3Q7Z3K6 550 aa16.21■□□□□ 0.19
SDHAF3-204ENST00000489852 PLEKHM2Q8IWE5 1019 aa16.21■□□□□ 0.19
SDHAF3-204ENST00000489852 PNPLA1Q8N8W4 532 aa16.21■□□□□ 0.19
SDHAF3-204ENST00000489852 LSM14AQ8ND56 463 aaKnown RBP16.21■□□□□ 0.19
SDHAF3-204ENST00000489852 LENG9Q96B70 501 aa16.21■□□□□ 0.19
SDHAF3-204ENST00000489852 LRRC3BQ96PB8 259 aa16.21■□□□□ 0.19
SDHAF3-204ENST00000489852 RIT2Q99578 217 aa16.21■□□□□ 0.19
SDHAF3-204ENST00000489852 TEKT3Q9BXF9 490 aa16.21■□□□□ 0.19
SDHAF3-204ENST00000489852 CLMPQ9H6B4 373 aa16.21■□□□□ 0.19
SDHAF3-204ENST00000489852 DKK4Q9UBT3 224 aa16.21■□□□□ 0.19
SDHAF3-204ENST00000489852 MBD1Q9UIS9 605 aaPredicted RBP16.21■□□□□ 0.19
SDHAF3-204ENST00000489852 TAF6LQ9Y6J9 622 aa16.21■□□□□ 0.19
SDHAF3-204ENST00000489852 SEC24AO95486 1093 aa16.2■□□□□ 0.18
SDHAF3-204ENST00000489852 BCKDHBP21953 392 aa16.2■□□□□ 0.18
SDHAF3-204ENST00000489852 TKTP29401 623 aaKnown RBP16.2■□□□□ 0.18
SDHAF3-204ENST00000489852 EPHA5P54756 1037 aa16.2■□□□□ 0.18
SDHAF3-204ENST00000489852 PTPAQ15257 358 aa16.2■□□□□ 0.18
SDHAF3-204ENST00000489852 TRIP6Q15654 476 aaKnown RBP16.2■□□□□ 0.18
SDHAF3-204ENST00000489852 ITPRIPL2Q3MIP1 535 aa16.2■□□□□ 0.18
SDHAF3-204ENST00000489852 LRCH2Q5VUJ6 765 aa16.2■□□□□ 0.18
SDHAF3-204ENST00000489852 SLC8B1Q6J4K2 584 aa16.2■□□□□ 0.18
SDHAF3-204ENST00000489852 CASC1Q6TDU7 716 aa16.2■□□□□ 0.18
SDHAF3-204ENST00000489852 SYT13Q7L8C5 426 aa16.2■□□□□ 0.18
SDHAF3-204ENST00000489852 ARID3BQ8IVW6 561 aaPredicted RBP16.2■□□□□ 0.18
SDHAF3-204ENST00000489852 SCUBE3Q8IX30 993 aa16.2■□□□□ 0.18
SDHAF3-204ENST00000489852 MB21D2Q8IYB1 491 aaPredicted RBP16.2■□□□□ 0.18
SDHAF3-204ENST00000489852 TMTC2Q8N394 836 aa16.2■□□□□ 0.18
SDHAF3-204ENST00000489852 FANCBQ8NB91 859 aa16.2■□□□□ 0.18
SDHAF3-204ENST00000489852 RDM1Q8NG50 284 aa16.2■□□□□ 0.18
SDHAF3-204ENST00000489852 SHKBP1Q8TBC3 707 aa16.2■□□□□ 0.18
SDHAF3-204ENST00000489852 DDX27Q96GQ7 796 aaKnown RBP16.2■□□□□ 0.18
SDHAF3-204ENST00000489852 CEP72Q9P209 647 aa16.2■□□□□ 0.18
SDHAF3-204ENST00000489852 INO80B-WBP1J3KQ70 363 aa16.19■□□□□ 0.18
SDHAF3-204ENST00000489852 MSH4O15457 936 aa16.19■□□□□ 0.18
SDHAF3-204ENST00000489852 OPHN1O60890 802 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms