RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 KCNE1P15382 129 aa15.26■□□□□ 0.03
VPS26A-205ENST00000489656 TFAMQ00059 246 aaKnown RBP15.26■□□□□ 0.03
VPS26A-205ENST00000489656 NCOA4Q13772 614 aa15.26■□□□□ 0.03
VPS26A-205ENST00000489656 ZBTB6Q15916 424 aa15.26■□□□□ 0.03
VPS26A-205ENST00000489656 GJB7Q6PEY0 223 aa15.26■□□□□ 0.03
VPS26A-205ENST00000489656 ARHGEF19Q8IW93 802 aa15.26■□□□□ 0.03
VPS26A-205ENST00000489656 KIAA1524Q8TCG1 905 aa15.26■□□□□ 0.03
VPS26A-205ENST00000489656 HELQQ8TDG4 1101 aa15.26■□□□□ 0.03
VPS26A-205ENST00000489656 DIS3LQ8TF46 1054 aaKnown RBP15.26■□□□□ 0.03
VPS26A-205ENST00000489656 TAF4BQ92750 862 aa15.26■□□□□ 0.03
VPS26A-205ENST00000489656 JAKMIP2Q96AA8 810 aa15.26■□□□□ 0.03
VPS26A-205ENST00000489656 FAXDC2Q96IV6 333 aa15.26■□□□□ 0.03
VPS26A-205ENST00000489656 FAM84AQ96KN4 292 aa15.26■□□□□ 0.03
VPS26A-205ENST00000489656 SPAG5Q96R06 1193 aa15.26■□□□□ 0.03
VPS26A-205ENST00000489656 KCND1Q9NSA2 647 aa15.26■□□□□ 0.03
VPS26A-205ENST00000489656 PYCARDQ9ULZ3 195 aa15.26■□□□□ 0.03
VPS26A-205ENST00000489656 PCDHB2Q9Y5E7 798 aa15.26■□□□□ 0.03
VPS26A-205ENST00000489656 FNDC1Q4ZHG4 1894 aaPredicted RBP15.25■□□□□ 0.03
VPS26A-205ENST00000489656 F8VZ95 297 aa15.25■□□□□ 0.03
VPS26A-205ENST00000489656 MGEA5O60502 916 aa15.25■□□□□ 0.03
VPS26A-205ENST00000489656 PQBP1O60828 265 aaKnown RBP15.25■□□□□ 0.03
VPS26A-205ENST00000489656 PHACTR2O75167 634 aa15.25■□□□□ 0.03
VPS26A-205ENST00000489656 STAU1O95793 577 aaKnown RBP15.25■□□□□ 0.03
VPS26A-205ENST00000489656 PRKCIP41743 596 aa15.25■□□□□ 0.03
VPS26A-205ENST00000489656 STAT1P42224 750 aa15.25■□□□□ 0.03
VPS26A-205ENST00000489656 NUBP1P53384 320 aa15.25■□□□□ 0.03
VPS26A-205ENST00000489656 TLE2Q04725 743 aa15.25■□□□□ 0.03
VPS26A-205ENST00000489656 FAAP100Q0VG06 881 aa15.25■□□□□ 0.03
VPS26A-205ENST00000489656 RAPGEF1Q13905 1077 aa15.25■□□□□ 0.03
VPS26A-205ENST00000489656 DRAP1Q14919 205 aaPredicted RBP15.25■□□□□ 0.03
VPS26A-205ENST00000489656 WDR44Q5JSH3 913 aa15.25■□□□□ 0.03
VPS26A-205ENST00000489656 E4F1Q66K89 784 aaPredicted RBP15.25■□□□□ 0.03
VPS26A-205ENST00000489656 HGSNATQ68CP4 663 aa15.25■□□□□ 0.03
VPS26A-205ENST00000489656 C1orf127Q8N9H9 656 aa15.25■□□□□ 0.03
VPS26A-205ENST00000489656 CXorf38Q8TB03 319 aa15.25■□□□□ 0.03
VPS26A-205ENST00000489656 TMEM106CQ9BVX2 250 aa15.25■□□□□ 0.03
VPS26A-205ENST00000489656 FTHL17Q9BXU8 183 aa15.25■□□□□ 0.03
VPS26A-205ENST00000489656 IMPG2Q9BZV3 1241 aa15.25■□□□□ 0.03
VPS26A-205ENST00000489656 GPR88Q9GZN0 384 aa15.25■□□□□ 0.03
VPS26A-205ENST00000489656 C11orf49Q9H6J7 331 aa15.25■□□□□ 0.03
VPS26A-205ENST00000489656 VRTNQ9H8Y1 702 aa15.25■□□□□ 0.03
VPS26A-205ENST00000489656 UBE2TQ9NPD8 197 aaPredicted RBP15.25■□□□□ 0.03
VPS26A-205ENST00000489656 C1orf112Q9NSG2 853 aa15.25■□□□□ 0.03
VPS26A-205ENST00000489656 ITGA11Q9UKX5 1188 aa15.25■□□□□ 0.03
VPS26A-205ENST00000489656 HES2Q9Y543 173 aa15.25■□□□□ 0.03
VPS26A-205ENST00000489656 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.25■□□□□ 0.03
VPS26A-205ENST00000489656 A0A0U1RQF3 1178 aa15.24■□□□□ 0.03
VPS26A-205ENST00000489656 SSU72P8A0A1W2PR75 194 aa15.24■□□□□ 0.03
VPS26A-205ENST00000489656 SERPING1P05155 500 aa15.24■□□□□ 0.03
VPS26A-205ENST00000489656 FERP16591 822 aa15.24■□□□□ 0.03
VPS26A-205ENST00000489656 SOX5P35711 763 aa15.24■□□□□ 0.03
VPS26A-205ENST00000489656 ATN1P54259 1190 aaPredicted RBP15.24■□□□□ 0.03
VPS26A-205ENST00000489656 MFAP3P55082 362 aa15.24■□□□□ 0.03
VPS26A-205ENST00000489656 NOP14P78316 857 aaKnown RBP15.24■□□□□ 0.03
VPS26A-205ENST00000489656 SGSM1Q2NKQ1 1148 aa15.24■□□□□ 0.03
VPS26A-205ENST00000489656 TRIM60Q495X7 471 aa15.24■□□□□ 0.03
VPS26A-205ENST00000489656 IRF2BP2Q7Z5L9 587 aa15.24■□□□□ 0.03
VPS26A-205ENST00000489656 CCDC170Q8IYT3 715 aa15.24■□□□□ 0.03
VPS26A-205ENST00000489656 SHC3Q92529 594 aa15.24■□□□□ 0.03
VPS26A-205ENST00000489656 TATDN2Q93075 761 aa15.24■□□□□ 0.03
VPS26A-205ENST00000489656 KIF12Q96FN5 646 aa15.24■□□□□ 0.03
VPS26A-205ENST00000489656 KREMEN1Q96MU8 473 aa15.24■□□□□ 0.03
VPS26A-205ENST00000489656 ZMAT2Q96NC0 199 aaKnown RBP15.24■□□□□ 0.03
VPS26A-205ENST00000489656 CHP1Q99653 195 aa15.24■□□□□ 0.03
VPS26A-205ENST00000489656 IFIH1Q9BYX4 1025 aaKnown RBP15.24■□□□□ 0.03
VPS26A-205ENST00000489656 MCOLN1Q9GZU1 580 aa15.24■□□□□ 0.03
VPS26A-205ENST00000489656 XYLT2Q9H1B5 865 aa15.24■□□□□ 0.03
VPS26A-205ENST00000489656 RGS18Q9NS28 235 aa15.24■□□□□ 0.03
VPS26A-205ENST00000489656 DPP3Q9NY33 737 aa15.24■□□□□ 0.03
VPS26A-205ENST00000489656 SIX4Q9UIU6 781 aa15.24■□□□□ 0.03
VPS26A-205ENST00000489656 TBX21Q9UL17 535 aa15.24■□□□□ 0.03
VPS26A-205ENST00000489656 GIT1Q9Y2X7 761 aa15.24■□□□□ 0.03
VPS26A-205ENST00000489656 BZW2Q9Y6E2 419 aaKnown RBP15.24■□□□□ 0.03
VPS26A-205ENST00000489656 SOWAHDA6NJG2 315 aa15.23■□□□□ 0.03
VPS26A-205ENST00000489656 ESPNB1AK53 854 aa15.23■□□□□ 0.03
VPS26A-205ENST00000489656 XPOTO43592 962 aaKnown RBP15.23■□□□□ 0.03
VPS26A-205ENST00000489656 CST3P01034 146 aaPredicted RBP15.23■□□□□ 0.03
VPS26A-205ENST00000489656 CCDC172P0C7W6 258 aa15.23■□□□□ 0.03
VPS26A-205ENST00000489656 ITGA4P13612 1032 aa15.23■□□□□ 0.03
VPS26A-205ENST00000489656 CYP3A5P20815 502 aa15.23■□□□□ 0.03
VPS26A-205ENST00000489656 TBXAS1P24557 533 aaPredicted RBP15.23■□□□□ 0.03
VPS26A-205ENST00000489656 AKAP5P24588 427 aa15.23■□□□□ 0.03
VPS26A-205ENST00000489656 MSNP26038 577 aaKnown RBP15.23■□□□□ 0.03
VPS26A-205ENST00000489656 ANXA13P27216 316 aa15.23■□□□□ 0.03
VPS26A-205ENST00000489656 ATICP31939 592 aa15.23■□□□□ 0.03
VPS26A-205ENST00000489656 TRPC3Q13507 836 aa15.23■□□□□ 0.03
VPS26A-205ENST00000489656 GPNMBQ14956 572 aa15.23■□□□□ 0.03
VPS26A-205ENST00000489656 ASIC2Q16515 512 aa15.23■□□□□ 0.03
VPS26A-205ENST00000489656 PLEKHG4Q58EX7 1191 aa15.23■□□□□ 0.03
VPS26A-205ENST00000489656 NECAB2Q7Z6G3 386 aa15.23■□□□□ 0.03
VPS26A-205ENST00000489656 PPM1KQ8N3J5 372 aa15.23■□□□□ 0.03
VPS26A-205ENST00000489656 BEST2Q8NFU1 509 aa15.23■□□□□ 0.03
VPS26A-205ENST00000489656 APBB2Q92870 758 aa15.23■□□□□ 0.03
VPS26A-205ENST00000489656 PAWRQ96IZ0 340 aaKnown RBP15.23■□□□□ 0.03
VPS26A-205ENST00000489656 ADAM2Q99965 735 aa15.23■□□□□ 0.03
VPS26A-205ENST00000489656 PI4K2AQ9BTU6 479 aa15.23■□□□□ 0.03
VPS26A-205ENST00000489656 APOBEC3GQ9HC16 384 aaKnown RBP15.23■□□□□ 0.03
VPS26A-205ENST00000489656 ARHGAP20Q9P2F6 1191 aa15.23■□□□□ 0.03
VPS26A-205ENST00000489656 PARP2Q9UGN5 583 aa15.23■□□□□ 0.03
VPS26A-205ENST00000489656 UBQLN1Q9UMX0 589 aaKnown RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms