RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 IFT20Q8IY31 132 aa9.11□□□□□ -0.95
VTI1A-207ENST00000489357 GPD1LQ8N335 351 aa9.11□□□□□ -0.95
VTI1A-207ENST00000489357 GOLGA6L1Q8N7Z2 621 aa9.11□□□□□ -0.95
VTI1A-207ENST00000489357 FBXL13Q8NEE6 735 aa9.11□□□□□ -0.95
VTI1A-207ENST00000489357 TPCN2Q8NHX9 752 aa9.11□□□□□ -0.95
VTI1A-207ENST00000489357 FAM71BQ8TC56 605 aa9.11□□□□□ -0.95
VTI1A-207ENST00000489357 PARD3BQ8TEW8 1205 aa9.11□□□□□ -0.95
VTI1A-207ENST00000489357 COG1Q8WTW3 980 aa9.11□□□□□ -0.95
VTI1A-207ENST00000489357 JPH2Q9BR39 696 aaPredicted RBP9.11□□□□□ -0.95
VTI1A-207ENST00000489357 GPR88Q9GZN0 384 aa9.11□□□□□ -0.95
VTI1A-207ENST00000489357 ISCUQ9H1K1 167 aa9.11□□□□□ -0.95
VTI1A-207ENST00000489357 DHX33Q9H6R0 707 aaKnown RBP9.11□□□□□ -0.95
VTI1A-207ENST00000489357 ABCB6Q9NP58 842 aa9.11□□□□□ -0.95
VTI1A-207ENST00000489357 PSD3Q9NYI0 1048 aa9.11□□□□□ -0.95
VTI1A-207ENST00000489357 PKD2L1Q9P0L9 805 aa9.11□□□□□ -0.95
VTI1A-207ENST00000489357 STIM2Q9P246 746 aa9.11□□□□□ -0.95
VTI1A-207ENST00000489357 TMEM59LQ9UK28 342 aa9.11□□□□□ -0.95
VTI1A-207ENST00000489357 BRCA2P51587 3418 aa9.11□□□□□ -0.95
VTI1A-207ENST00000489357 RBM47A0AV96 593 aaKnown RBP9.1□□□□□ -0.95
VTI1A-207ENST00000489357 CCDC169A6NNP5 214 aa9.1□□□□□ -0.95
VTI1A-207ENST00000489357 PDE2AO00408 941 aaPredicted RBP9.1□□□□□ -0.95
VTI1A-207ENST00000489357 BUB1O43683 1085 aa9.1□□□□□ -0.95
VTI1A-207ENST00000489357 ZNF862O60290 1169 aa9.1□□□□□ -0.95
VTI1A-207ENST00000489357 GPR37L1O60883 481 aa9.1□□□□□ -0.95
VTI1A-207ENST00000489357 SASH3O75995 380 aa9.1□□□□□ -0.95
VTI1A-207ENST00000489357 SGPL1O95470 568 aa9.1□□□□□ -0.95
VTI1A-207ENST00000489357 TRIM49P0CI25 452 aa9.1□□□□□ -0.95
VTI1A-207ENST00000489357 TRIM49CP0CI26 452 aa9.1□□□□□ -0.95
VTI1A-207ENST00000489357 TNFAIP3P21580 790 aa9.1□□□□□ -0.95
VTI1A-207ENST00000489357 GJA8P48165 433 aa9.1□□□□□ -0.95
VTI1A-207ENST00000489357 ALDH5A1P51649 535 aaPredicted RBP9.1□□□□□ -0.95
VTI1A-207ENST00000489357 EFNA5P52803 228 aa9.1□□□□□ -0.95
VTI1A-207ENST00000489357 AP3M2P53677 418 aa9.1□□□□□ -0.95
VTI1A-207ENST00000489357 BPIFB4P59827 614 aa9.1□□□□□ -0.95
VTI1A-207ENST00000489357 NKX3-2P78367 333 aa9.1□□□□□ -0.95
VTI1A-207ENST00000489357 SKOR1P84550 965 aa9.1□□□□□ -0.95
VTI1A-207ENST00000489357 STRN3Q13033 797 aa9.1□□□□□ -0.95
VTI1A-207ENST00000489357 ZNF697Q5TEC3 545 aa9.1□□□□□ -0.95
VTI1A-207ENST00000489357 MFSD14CQ5VZR4 134 aa9.1□□□□□ -0.95
VTI1A-207ENST00000489357 PHLDB3Q6NSJ2 640 aa9.1□□□□□ -0.95
VTI1A-207ENST00000489357 SWSAP1Q6NVH7 229 aa9.1□□□□□ -0.95
VTI1A-207ENST00000489357 NFRKBQ6P4R8 1299 aa9.1□□□□□ -0.95
VTI1A-207ENST00000489357 PEX26Q7Z412 305 aa9.1□□□□□ -0.95
VTI1A-207ENST00000489357 ZNF677Q86XU0 584 aa9.1□□□□□ -0.95
VTI1A-207ENST00000489357 FAM71AQ8IYT1 594 aa9.1□□□□□ -0.95
VTI1A-207ENST00000489357 RASGEF1CQ8N431 466 aa9.1□□□□□ -0.95
VTI1A-207ENST00000489357 USP38Q8NB14 1042 aa9.1□□□□□ -0.95
VTI1A-207ENST00000489357 SLC7A3Q8WY07 619 aa9.1□□□□□ -0.95
VTI1A-207ENST00000489357 SHC3Q92529 594 aa9.1□□□□□ -0.95
VTI1A-207ENST00000489357 CAVIN3Q969G5 261 aa9.1□□□□□ -0.95
VTI1A-207ENST00000489357 HES6Q96HZ4 224 aa9.1□□□□□ -0.95
VTI1A-207ENST00000489357 CAPZA3Q96KX2 299 aa9.1□□□□□ -0.95
VTI1A-207ENST00000489357 AGPAT1Q99943 283 aa9.1□□□□□ -0.95
VTI1A-207ENST00000489357 CBWD1Q9BRT8 395 aa9.1□□□□□ -0.95
VTI1A-207ENST00000489357 CARD9Q9H257 536 aa9.1□□□□□ -0.95
VTI1A-207ENST00000489357 SLITRK6Q9H5Y7 841 aa9.1□□□□□ -0.95
VTI1A-207ENST00000489357 ZNF302Q9NR11 478 aa9.1□□□□□ -0.95
VTI1A-207ENST00000489357 NRBP2Q9NSY0 501 aa9.1□□□□□ -0.95
VTI1A-207ENST00000489357 OGDHLQ9ULD0 1010 aa9.1□□□□□ -0.95
VTI1A-207ENST00000489357 TNRC18O15417 2968 aaPredicted RBP9.1□□□□□ -0.95
VTI1A-207ENST00000489357 MYH9P35579 1960 aaKnown RBP9.1□□□□□ -0.95
VTI1A-207ENST00000489357 MYH10P35580 1976 aa9.1□□□□□ -0.95
VTI1A-207ENST00000489357 ZNF233A6NK53 670 aa9.09□□□□□ -0.95
VTI1A-207ENST00000489357 ASB14A6NK59 587 aa9.09□□□□□ -0.95
VTI1A-207ENST00000489357 A6NNZ2 444 aa9.09□□□□□ -0.95
VTI1A-207ENST00000489357 PGRMC1O00264 195 aaKnown RBP9.09□□□□□ -0.95
VTI1A-207ENST00000489357 HNRNPDLO14979 420 aaKnown RBP9.09□□□□□ -0.95
VTI1A-207ENST00000489357 ZNF185O15231 689 aa9.09□□□□□ -0.95
VTI1A-207ENST00000489357 EXTL3O43909 919 aa9.09□□□□□ -0.95
VTI1A-207ENST00000489357 RTN2O75298 545 aa9.09□□□□□ -0.95
VTI1A-207ENST00000489357 SEC31AO94979 1220 aaKnown RBP9.09□□□□□ -0.95
VTI1A-207ENST00000489357 CCND3P30281 292 aaPredicted RBP9.09□□□□□ -0.95
VTI1A-207ENST00000489357 ADSSP30520 456 aa9.09□□□□□ -0.95
VTI1A-207ENST00000489357 NOP2P46087 812 aaKnown RBP9.09□□□□□ -0.95
VTI1A-207ENST00000489357 POLGP54098 1239 aaPredicted RBP9.09□□□□□ -0.95
VTI1A-207ENST00000489357 GALCP54803 685 aa9.09□□□□□ -0.95
VTI1A-207ENST00000489357 CYP24A1Q07973 514 aa9.09□□□□□ -0.95
VTI1A-207ENST00000489357 PPP3CAQ08209 521 aa9.09□□□□□ -0.95
VTI1A-207ENST00000489357 EMC2Q15006 297 aa9.09□□□□□ -0.95
VTI1A-207ENST00000489357 PSMD6Q15008 389 aa9.09□□□□□ -0.95
VTI1A-207ENST00000489357 AGERQ15109 404 aa9.09□□□□□ -0.95
VTI1A-207ENST00000489357 TUBB8Q3ZCM7 444 aa9.09□□□□□ -0.95
VTI1A-207ENST00000489357 PRAMEF19Q5SWL8 479 aa9.09□□□□□ -0.95
VTI1A-207ENST00000489357 C1orf220Q5T0J3 134 aa9.09□□□□□ -0.95
VTI1A-207ENST00000489357 PLA2G4FQ68DD2 849 aa9.09□□□□□ -0.95
VTI1A-207ENST00000489357 TAPT1Q6NXT6 567 aa9.09□□□□□ -0.95
VTI1A-207ENST00000489357 METTL7BQ6UX53 244 aa9.09□□□□□ -0.95
VTI1A-207ENST00000489357 ZPBP2Q6X784 338 aa9.09□□□□□ -0.95
VTI1A-207ENST00000489357 C15orf39Q6ZRI6 1047 aa9.09□□□□□ -0.95
VTI1A-207ENST00000489357 ARMCX2Q7L311 632 aa9.09□□□□□ -0.95
VTI1A-207ENST00000489357 BPHLQ86WA6 291 aaPredicted RBP9.09□□□□□ -0.95
VTI1A-207ENST00000489357 CCDC60Q8IWA6 550 aaPredicted RBP9.09□□□□□ -0.95
VTI1A-207ENST00000489357 OLIG1Q8TAK6 271 aa9.09□□□□□ -0.95
VTI1A-207ENST00000489357 WHAMMQ8TF30 809 aa9.09□□□□□ -0.95
VTI1A-207ENST00000489357 AENQ8WTP8 325 aaKnown RBP9.09□□□□□ -0.95
VTI1A-207ENST00000489357 TCP11Q8WWU5 503 aa9.09□□□□□ -0.95
VTI1A-207ENST00000489357 POMGNT1Q8WZA1 660 aa9.09□□□□□ -0.95
VTI1A-207ENST00000489357 EXOC4Q96A65 974 aa9.09□□□□□ -0.95
VTI1A-207ENST00000489357 TRIM11Q96F44 468 aa9.09□□□□□ -0.95
VTI1A-207ENST00000489357 NT5C1BQ96P26 610 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms