RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 CNTN6Q9UQ52 1028 aa13.83□□□□□ -0.2
TOP3A-206ENST00000489131 ATP8B3O60423 1300 aa13.83□□□□□ -0.2
TOP3A-206ENST00000489131 A0A0U1RQF3 1178 aa13.82□□□□□ -0.2
TOP3A-206ENST00000489131 SOWAHDA6NJG2 315 aa13.82□□□□□ -0.2
TOP3A-206ENST00000489131 RBAK-RBAKDNI3L0D1 243 aa13.82□□□□□ -0.2
TOP3A-206ENST00000489131 INPPL1O15357 1258 aa13.82□□□□□ -0.2
TOP3A-206ENST00000489131 TLR3O15455 904 aaKnown RBP13.82□□□□□ -0.2
TOP3A-206ENST00000489131 CCP110O43303 1012 aa13.82□□□□□ -0.2
TOP3A-206ENST00000489131 LRRN2O75325 713 aa13.82□□□□□ -0.2
TOP3A-206ENST00000489131 RECQL4O94761 1208 aa13.82□□□□□ -0.2
TOP3A-206ENST00000489131 TMEM191BP0C7N4 346 aa13.82□□□□□ -0.2
TOP3A-206ENST00000489131 CCDC172P0C7W6 258 aa13.82□□□□□ -0.2
TOP3A-206ENST00000489131 CYP3A5P20815 502 aa13.82□□□□□ -0.2
TOP3A-206ENST00000489131 TBXAS1P24557 533 aaPredicted RBP13.82□□□□□ -0.2
TOP3A-206ENST00000489131 CD52P31358 61 aa13.82□□□□□ -0.2
TOP3A-206ENST00000489131 ATICP31939 592 aa13.82□□□□□ -0.2
TOP3A-206ENST00000489131 BIRC3Q13489 604 aa13.82□□□□□ -0.2
TOP3A-206ENST00000489131 DRAP1Q14919 205 aaPredicted RBP13.82□□□□□ -0.2
TOP3A-206ENST00000489131 WDR44Q5JSH3 913 aa13.82□□□□□ -0.2
TOP3A-206ENST00000489131 LMBRD2Q68DH5 695 aaPredicted RBP13.82□□□□□ -0.2
TOP3A-206ENST00000489131 TWF2Q6IBS0 349 aaKnown RBP13.82□□□□□ -0.2
TOP3A-206ENST00000489131 GJB7Q6PEY0 223 aa13.82□□□□□ -0.2
TOP3A-206ENST00000489131 ZNF662Q6ZS27 426 aa13.82□□□□□ -0.2
TOP3A-206ENST00000489131 LRRC8DQ7L1W4 858 aa13.82□□□□□ -0.2
TOP3A-206ENST00000489131 FAM71AQ8IYT1 594 aa13.82□□□□□ -0.2
TOP3A-206ENST00000489131 HACE1Q8IYU2 909 aa13.82□□□□□ -0.2
TOP3A-206ENST00000489131 UBR7Q8N806 425 aa13.82□□□□□ -0.2
TOP3A-206ENST00000489131 C1orf127Q8N9H9 656 aa13.82□□□□□ -0.2
TOP3A-206ENST00000489131 OSBPL7Q9BZF2 842 aa13.82□□□□□ -0.2
TOP3A-206ENST00000489131 UBE2TQ9NPD8 197 aaPredicted RBP13.82□□□□□ -0.2
TOP3A-206ENST00000489131 SIX4Q9UIU6 781 aa13.82□□□□□ -0.2
TOP3A-206ENST00000489131 PCDHB2Q9Y5E7 798 aa13.82□□□□□ -0.2
TOP3A-206ENST00000489131 DNAH12Q6ZR08 3092 aa13.81□□□□□ -0.2
TOP3A-206ENST00000489131 EIF3CLB5ME19 914 aaKnown RBP13.81□□□□□ -0.2
TOP3A-206ENST00000489131 NDUFA10O95299 355 aa13.81□□□□□ -0.2
TOP3A-206ENST00000489131 CST3P01034 146 aaPredicted RBP13.81□□□□□ -0.2
TOP3A-206ENST00000489131 TFRCP02786 760 aaKnown RBP13.81□□□□□ -0.2
TOP3A-206ENST00000489131 GHRP10912 638 aa13.81□□□□□ -0.2
TOP3A-206ENST00000489131 ZSCAN20P17040 1043 aaPredicted RBP13.81□□□□□ -0.2
TOP3A-206ENST00000489131 CYLC1P35663 651 aaPredicted RBP13.81□□□□□ -0.2
TOP3A-206ENST00000489131 NOP14P78316 857 aaKnown RBP13.81□□□□□ -0.2
TOP3A-206ENST00000489131 TFAMQ00059 246 aaKnown RBP13.81□□□□□ -0.2
TOP3A-206ENST00000489131 RAPGEF1Q13905 1077 aa13.81□□□□□ -0.2
TOP3A-206ENST00000489131 ASIC2Q16515 512 aa13.81□□□□□ -0.2
TOP3A-206ENST00000489131 CCAR2Q8N163 923 aaKnown RBP13.81□□□□□ -0.2
TOP3A-206ENST00000489131 EIF3CQ99613 913 aaKnown RBP13.81□□□□□ -0.2
TOP3A-206ENST00000489131 FTHL17Q9BXU8 183 aa13.81□□□□□ -0.2
TOP3A-206ENST00000489131 IMPG2Q9BZV3 1241 aa13.81□□□□□ -0.2
TOP3A-206ENST00000489131 NHEJ1Q9H9Q4 299 aaPredicted RBP13.81□□□□□ -0.2
TOP3A-206ENST00000489131 APOBEC3GQ9HC16 384 aaKnown RBP13.81□□□□□ -0.2
TOP3A-206ENST00000489131 RGS18Q9NS28 235 aa13.81□□□□□ -0.2
TOP3A-206ENST00000489131 UBQLN1Q9UMX0 589 aaKnown RBP13.81□□□□□ -0.2
TOP3A-206ENST00000489131 GIT1Q9Y2X7 761 aa13.81□□□□□ -0.2
TOP3A-206ENST00000489131 ADGRG1Q9Y653 693 aa13.81□□□□□ -0.2
TOP3A-206ENST00000489131 EPN1Q9Y6I3 576 aaPredicted RBP13.81□□□□□ -0.2
TOP3A-206ENST00000489131 ANO9A1A5B4 782 aa13.8□□□□□ -0.2
TOP3A-206ENST00000489131 XPOTO43592 962 aaKnown RBP13.8□□□□□ -0.2
TOP3A-206ENST00000489131 MGEA5O60502 916 aa13.8□□□□□ -0.2
TOP3A-206ENST00000489131 PHACTR2O75167 634 aa13.8□□□□□ -0.2
TOP3A-206ENST00000489131 ACO1P21399 889 aaKnown RBP13.8□□□□□ -0.2
TOP3A-206ENST00000489131 FAM189BP81408 668 aa13.8□□□□□ -0.2
TOP3A-206ENST00000489131 FAAP100Q0VG06 881 aa13.8□□□□□ -0.2
TOP3A-206ENST00000489131 NFX1Q12986 1120 aaKnown RBP13.8□□□□□ -0.2
TOP3A-206ENST00000489131 CUL2Q13617 745 aa13.8□□□□□ -0.2
TOP3A-206ENST00000489131 MTF1Q14872 753 aa13.8□□□□□ -0.2
TOP3A-206ENST00000489131 GPNMBQ14956 572 aa13.8□□□□□ -0.2
TOP3A-206ENST00000489131 PLEKHG4Q58EX7 1191 aa13.8□□□□□ -0.2
TOP3A-206ENST00000489131 ZNF598Q86UK7 904 aaKnown RBP13.8□□□□□ -0.2
TOP3A-206ENST00000489131 PPM1KQ8N3J5 372 aa13.8□□□□□ -0.2
TOP3A-206ENST00000489131 LRRC52Q8N7C0 313 aa13.8□□□□□ -0.2
TOP3A-206ENST00000489131 OLIG1Q8TAK6 271 aa13.8□□□□□ -0.2
TOP3A-206ENST00000489131 TATDN2Q93075 761 aa13.8□□□□□ -0.2
TOP3A-206ENST00000489131 FAM212AQ96EL1 285 aa13.8□□□□□ -0.2
TOP3A-206ENST00000489131 FAM84AQ96KN4 292 aa13.8□□□□□ -0.2
TOP3A-206ENST00000489131 ZMAT2Q96NC0 199 aaKnown RBP13.8□□□□□ -0.2
TOP3A-206ENST00000489131 BCO2Q9BYV7 579 aa13.8□□□□□ -0.2
TOP3A-206ENST00000489131 UBN1Q9NPG3 1134 aa13.8□□□□□ -0.2
TOP3A-206ENST00000489131 TBX21Q9UL17 535 aa13.8□□□□□ -0.2
TOP3A-206ENST00000489131 NENFQ9UMX5 172 aa13.8□□□□□ -0.2
TOP3A-206ENST00000489131 HES2Q9Y543 173 aa13.8□□□□□ -0.2
TOP3A-206ENST00000489131 NUB1Q9Y5A7 615 aa13.8□□□□□ -0.2
TOP3A-206ENST00000489131 BRCA2P51587 3418 aa13.8□□□□□ -0.2
TOP3A-206ENST00000489131 SMIM28A0A1B0GU29 152 aa13.79□□□□□ -0.2
TOP3A-206ENST00000489131 GOLGA6L9A6NEM1 432 aa13.79□□□□□ -0.2
TOP3A-206ENST00000489131 DCDC2CA8MYV0 355 aa13.79□□□□□ -0.2
TOP3A-206ENST00000489131 C9IYK1 514 aa13.79□□□□□ -0.2
TOP3A-206ENST00000489131 FOXN3O00409 490 aaPredicted RBP13.79□□□□□ -0.2
TOP3A-206ENST00000489131 ZSCAN12O43309 604 aa13.79□□□□□ -0.2
TOP3A-206ENST00000489131 EVI5O60447 810 aa13.79□□□□□ -0.2
TOP3A-206ENST00000489131 CXCL10P02778 98 aa13.79□□□□□ -0.2
TOP3A-206ENST00000489131 CCDC175P0C221 793 aa13.79□□□□□ -0.2
TOP3A-206ENST00000489131 ATF7P17544 494 aaPredicted RBP13.79□□□□□ -0.2
TOP3A-206ENST00000489131 LRPAP1P30533 357 aa13.79□□□□□ -0.2
TOP3A-206ENST00000489131 EIF4A3P38919 411 aaKnown RBP13.79□□□□□ -0.2
TOP3A-206ENST00000489131 MYL6P60660 151 aa13.79□□□□□ -0.2
TOP3A-206ENST00000489131 RBP5P82980 135 aa13.79□□□□□ -0.2
TOP3A-206ENST00000489131 KLHL30Q0D2K2 578 aa13.79□□□□□ -0.2
TOP3A-206ENST00000489131 TRPC3Q13507 836 aa13.79□□□□□ -0.2
TOP3A-206ENST00000489131 TOGARAM2Q6ZUX3 1019 aa13.79□□□□□ -0.2
TOP3A-206ENST00000489131 GSTCDQ8NEC7 633 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms