RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 IGSF9Q9P2J2 1179 aa13.7□□□□□ -0.22
SRRM1-216ENST00000489130 CCDC39Q9UFE4 941 aa13.7□□□□□ -0.22
SRRM1-216ENST00000489130 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.7□□□□□ -0.22
SRRM1-216ENST00000489130 CDY1Q9Y6F8 540 aa13.7□□□□□ -0.22
SRRM1-216ENST00000489130 MYH11P35749 1972 aa13.7□□□□□ -0.22
SRRM1-216ENST00000489130 MTCL1Q9Y4B5 1905 aaKnown RBP13.69□□□□□ -0.22
SRRM1-216ENST00000489130 TTC26A0AVF1 554 aa13.69□□□□□ -0.22
SRRM1-216ENST00000489130 GBP2P32456 591 aaPredicted RBP13.69□□□□□ -0.22
SRRM1-216ENST00000489130 TXLNAP40222 546 aa13.69□□□□□ -0.22
SRRM1-216ENST00000489130 MATR3P43243 847 aaKnown RBP eCLIP13.69□□□□□ -0.22
SRRM1-216ENST00000489130 CEBPZQ03701 1054 aaKnown RBP13.69□□□□□ -0.22
SRRM1-216ENST00000489130 TDGQ13569 410 aa13.69□□□□□ -0.22
SRRM1-216ENST00000489130 SLC39A14Q15043 492 aa13.69□□□□□ -0.22
SRRM1-216ENST00000489130 UVSSAQ2YD98 709 aa13.69□□□□□ -0.22
SRRM1-216ENST00000489130 PPM1LQ5SGD2 360 aa13.69□□□□□ -0.22
SRRM1-216ENST00000489130 VARS2Q5ST30 1063 aaKnown RBP13.69□□□□□ -0.22
SRRM1-216ENST00000489130 SLC8B1Q6J4K2 584 aa13.69□□□□□ -0.22
SRRM1-216ENST00000489130 SLC39A4Q6P5W5 647 aa13.69□□□□□ -0.22
SRRM1-216ENST00000489130 RTL10Q7L3V2 364 aa13.69□□□□□ -0.22
SRRM1-216ENST00000489130 KRI1Q8N9T8 703 aaKnown RBP13.69□□□□□ -0.22
SRRM1-216ENST00000489130 SUSD3Q96L08 255 aa13.69□□□□□ -0.22
SRRM1-216ENST00000489130 USP28Q96RU2 1077 aa13.69□□□□□ -0.22
SRRM1-216ENST00000489130 MYADMQ96S97 322 aa13.69□□□□□ -0.22
SRRM1-216ENST00000489130 ST6GALNAC4Q9H4F1 302 aa13.69□□□□□ -0.22
SRRM1-216ENST00000489130 ZHX3Q9H4I2 956 aa13.69□□□□□ -0.22
SRRM1-216ENST00000489130 FOXD4L1Q9NU39 408 aa13.69□□□□□ -0.22
SRRM1-216ENST00000489130 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.69□□□□□ -0.22
SRRM1-216ENST00000489130 TUBGCP4Q9UGJ1 667 aa13.69□□□□□ -0.22
SRRM1-216ENST00000489130 DUSP12Q9UNI6 340 aa13.69□□□□□ -0.22
SRRM1-216ENST00000489130 NUB1Q9Y5A7 615 aa13.69□□□□□ -0.22
SRRM1-216ENST00000489130 WDFY4Q6ZS81 3184 aa13.69□□□□□ -0.22
SRRM1-216ENST00000489130 TRIP11Q15643 1979 aa13.69□□□□□ -0.22
SRRM1-216ENST00000489130 A0A0B4J269 797 aa13.68□□□□□ -0.22
SRRM1-216ENST00000489130 OGTO15294 1046 aa13.68□□□□□ -0.22
SRRM1-216ENST00000489130 TBC1D4O60343 1298 aa13.68□□□□□ -0.22
SRRM1-216ENST00000489130 PDGFBP01127 241 aaPredicted RBP13.68□□□□□ -0.22
SRRM1-216ENST00000489130 ADRB2P07550 413 aa13.68□□□□□ -0.22
SRRM1-216ENST00000489130 CYP3A5P20815 502 aa13.68□□□□□ -0.22
SRRM1-216ENST00000489130 NMT1P30419 496 aaKnown RBP13.68□□□□□ -0.22
SRRM1-216ENST00000489130 TNFSF9P41273 254 aa13.68□□□□□ -0.22
SRRM1-216ENST00000489130 NASPP49321 788 aaPredicted RBP13.68□□□□□ -0.22
SRRM1-216ENST00000489130 PPP2R3AQ06190 1150 aa13.68□□□□□ -0.22
SRRM1-216ENST00000489130 MRPL58Q14197 206 aaKnown RBP13.68□□□□□ -0.22
SRRM1-216ENST00000489130 ZBTB6Q15916 424 aa13.68□□□□□ -0.22
SRRM1-216ENST00000489130 ZBTB41Q5SVQ8 909 aa13.68□□□□□ -0.22
SRRM1-216ENST00000489130 AXDND1Q5T1B0 1012 aaPredicted RBP13.68□□□□□ -0.22
SRRM1-216ENST00000489130 IER5LQ5T953 404 aa13.68□□□□□ -0.22
SRRM1-216ENST00000489130 RRAGBQ5VZM2 374 aa13.68□□□□□ -0.22
SRRM1-216ENST00000489130 GET4Q7L5D6 327 aaPredicted RBP13.68□□□□□ -0.22
SRRM1-216ENST00000489130 SLC7A14Q8TBB6 771 aa13.68□□□□□ -0.22
SRRM1-216ENST00000489130 TSPAN18Q96SJ8 248 aa13.68□□□□□ -0.22
SRRM1-216ENST00000489130 PRRX2Q99811 253 aa13.68□□□□□ -0.22
SRRM1-216ENST00000489130 CITO14578 2027 aa13.68□□□□□ -0.22
SRRM1-216ENST00000489130 KMT2EQ8IZD2 1858 aa13.67□□□□□ -0.22
SRRM1-216ENST00000489130 MUC6Q6W4X9 2439 aa13.67□□□□□ -0.22
SRRM1-216ENST00000489130 MYMKA6NI61 221 aa13.67□□□□□ -0.22
SRRM1-216ENST00000489130 XYLBO75191 536 aa13.67□□□□□ -0.22
SRRM1-216ENST00000489130 LAMP2P13473 410 aa13.67□□□□□ -0.22
SRRM1-216ENST00000489130 FSHRP23945 695 aa13.67□□□□□ -0.22
SRRM1-216ENST00000489130 AVPR2P30518 371 aa13.67□□□□□ -0.22
SRRM1-216ENST00000489130 LRPAP1P30533 357 aa13.67□□□□□ -0.22
SRRM1-216ENST00000489130 VCPP55072 806 aaKnown RBP13.67□□□□□ -0.22
SRRM1-216ENST00000489130 ROR1Q01973 937 aa13.67□□□□□ -0.22
SRRM1-216ENST00000489130 NHLH1Q02575 133 aa13.67□□□□□ -0.22
SRRM1-216ENST00000489130 ENOX2Q16206 610 aaKnown RBP13.67□□□□□ -0.22
SRRM1-216ENST00000489130 ZC2HC1CQ53FD0 456 aaPredicted RBP13.67□□□□□ -0.22
SRRM1-216ENST00000489130 CCDC73Q6ZRK6 1079 aa13.67□□□□□ -0.22
SRRM1-216ENST00000489130 GRASPQ7Z6J2 395 aaPredicted RBP13.67□□□□□ -0.22
SRRM1-216ENST00000489130 DDX12PQ92771 950 aa13.67□□□□□ -0.22
SRRM1-216ENST00000489130 NXPE3Q969Y0 559 aa13.67□□□□□ -0.22
SRRM1-216ENST00000489130 HVCN1Q96D96 273 aa13.67□□□□□ -0.22
SRRM1-216ENST00000489130 KIF12Q96FN5 646 aa13.67□□□□□ -0.22
SRRM1-216ENST00000489130 MSTO1Q9BUK6 570 aa13.67□□□□□ -0.22
SRRM1-216ENST00000489130 RPF1Q9H9Y2 349 aaKnown RBP13.67□□□□□ -0.22
SRRM1-216ENST00000489130 SEL1LQ9UBV2 794 aa13.67□□□□□ -0.22
SRRM1-216ENST00000489130 CPSF3Q9UKF6 684 aaKnown RBP13.67□□□□□ -0.22
SRRM1-216ENST00000489130 UBQLN1Q9UMX0 589 aaKnown RBP13.67□□□□□ -0.22
SRRM1-216ENST00000489130 STYXL1Q9Y6J8 313 aa13.67□□□□□ -0.22
SRRM1-216ENST00000489130 PDCD11Q14690 1871 aaKnown RBP13.67□□□□□ -0.22
SRRM1-216ENST00000489130 WDR27A2RRH5 827 aa13.66□□□□□ -0.22
SRRM1-216ENST00000489130 LACTBL1A8MY62 500 aa13.66□□□□□ -0.22
SRRM1-216ENST00000489130 H7C4K7 107 aa13.66□□□□□ -0.22
SRRM1-216ENST00000489130 CCL16O15467 120 aa13.66□□□□□ -0.22
SRRM1-216ENST00000489130 PPP1R37O75864 691 aa13.66□□□□□ -0.22
SRRM1-216ENST00000489130 ABLIM3O94929 683 aa13.66□□□□□ -0.22
SRRM1-216ENST00000489130 MCM4P33991 863 aa13.66□□□□□ -0.22
SRRM1-216ENST00000489130 AARSP49588 968 aaKnown RBP eCLIP13.66□□□□□ -0.22
SRRM1-216ENST00000489130 SPAG1Q07617 926 aa13.66□□□□□ -0.22
SRRM1-216ENST00000489130 SV2BQ7L1I2 683 aa13.66□□□□□ -0.22
SRRM1-216ENST00000489130 DYMQ7RTS9 669 aa13.66□□□□□ -0.22
SRRM1-216ENST00000489130 ZNF720Q7Z2F6 126 aa13.66□□□□□ -0.22
SRRM1-216ENST00000489130 SFR1Q86XK3 245 aa13.66□□□□□ -0.22
SRRM1-216ENST00000489130 CD302Q8IX05 232 aa13.66□□□□□ -0.22
SRRM1-216ENST00000489130 LINC00301Q8NCQ3 95 aa13.66□□□□□ -0.22
SRRM1-216ENST00000489130 APPL2Q8NEU8 664 aa13.66□□□□□ -0.22
SRRM1-216ENST00000489130 PRSS33Q8NF86 280 aa13.66□□□□□ -0.22
SRRM1-216ENST00000489130 ZNF461Q8TAF7 563 aa13.66□□□□□ -0.22
SRRM1-216ENST00000489130 DNAJC19Q96DA6 116 aa13.66□□□□□ -0.22
SRRM1-216ENST00000489130 STRA6Q9BX79 667 aa13.66□□□□□ -0.22
SRRM1-216ENST00000489130 PCDHB8Q9UN66 801 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms