RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 ZNF197O14709 1029 aa17.85■□□□□ 0.45
USP48-210ENST00000489108 USO1O60763 962 aaKnown RBP17.85■□□□□ 0.45
USP48-210ENST00000489108 CDC45O75419 566 aa17.85■□□□□ 0.45
USP48-210ENST00000489108 ABLIM3O94929 683 aa17.85■□□□□ 0.45
USP48-210ENST00000489108 PSMA5P28066 241 aa17.85■□□□□ 0.45
USP48-210ENST00000489108 PMLP29590 882 aa17.85■□□□□ 0.45
USP48-210ENST00000489108 EARS2Q5JPH6 523 aaKnown RBP17.85■□□□□ 0.45
USP48-210ENST00000489108 GLRA4Q5JXX5 417 aa17.85■□□□□ 0.45
USP48-210ENST00000489108 HEATR6Q6AI08 1181 aaKnown RBP17.85■□□□□ 0.45
USP48-210ENST00000489108 IL31Q6EBC2 164 aa17.85■□□□□ 0.45
USP48-210ENST00000489108 SDK1Q7Z5N4 2213 aa17.85■□□□□ 0.45
USP48-210ENST00000489108 SPEM1Q8N4L4 309 aa17.85■□□□□ 0.45
USP48-210ENST00000489108 C3orf58Q8NDZ4 430 aa17.85■□□□□ 0.45
USP48-210ENST00000489108 SMARCD2Q92925 531 aa17.85■□□□□ 0.45
USP48-210ENST00000489108 NAP1L4Q99733 375 aaKnown RBP17.85■□□□□ 0.45
USP48-210ENST00000489108 GJB4Q9NTQ9 266 aa17.85■□□□□ 0.45
USP48-210ENST00000489108 ZNF263O14978 683 aa17.84■□□□□ 0.45
USP48-210ENST00000489108 MICAL2O94851 1124 aa17.84■□□□□ 0.45
USP48-210ENST00000489108 SEC24AO95486 1093 aa17.84■□□□□ 0.45
USP48-210ENST00000489108 CNR2P34972 360 aa17.84■□□□□ 0.45
USP48-210ENST00000489108 RBM25P49756 843 aaKnown RBP17.84■□□□□ 0.45
USP48-210ENST00000489108 ARPP19P56211 112 aa17.84■□□□□ 0.45
USP48-210ENST00000489108 STK3Q13188 491 aa17.84■□□□□ 0.45
USP48-210ENST00000489108 PRPF4BQ13523 1007 aaKnown RBP17.84■□□□□ 0.45
USP48-210ENST00000489108 UPP1Q16831 310 aa17.84■□□□□ 0.45
USP48-210ENST00000489108 EEF1DP3Q658K8 133 aa17.84■□□□□ 0.45
USP48-210ENST00000489108 CDCA2Q69YH5 1023 aaPredicted RBP17.84■□□□□ 0.45
USP48-210ENST00000489108 SLC8B1Q6J4K2 584 aa17.84■□□□□ 0.45
USP48-210ENST00000489108 LONP2Q86WA8 852 aa17.84■□□□□ 0.45
USP48-210ENST00000489108 ZBTB8OSQ8IWT0 167 aa17.84■□□□□ 0.45
USP48-210ENST00000489108 HS6ST3Q8IZP7 471 aa17.84■□□□□ 0.45
USP48-210ENST00000489108 FAM160A2Q8N612 972 aaPredicted RBP17.84■□□□□ 0.45
USP48-210ENST00000489108 PPP1R10Q96QC0 940 aaKnown RBP17.84■□□□□ 0.45
USP48-210ENST00000489108 CYP4F11Q9HBI6 524 aa17.84■□□□□ 0.45
USP48-210ENST00000489108 GOLGA2P5Q9HBQ8 144 aa17.84■□□□□ 0.45
USP48-210ENST00000489108 RBM12Q9NTZ6 932 aaKnown RBP17.84■□□□□ 0.45
USP48-210ENST00000489108 PCDHA12Q9UN75 941 aa17.84■□□□□ 0.45
USP48-210ENST00000489108 BAHCC1Q9P281 2608 aa17.83■□□□□ 0.44
USP48-210ENST00000489108 FAM205CA6NFA0 338 aa17.83■□□□□ 0.44
USP48-210ENST00000489108 K7ESF4 209 aa17.83■□□□□ 0.44
USP48-210ENST00000489108 TM4SF5O14894 197 aa17.83■□□□□ 0.44
USP48-210ENST00000489108 TRAPPC3O43617 180 aa17.83■□□□□ 0.44
USP48-210ENST00000489108 FOXD2O60548 495 aaPredicted RBP17.83■□□□□ 0.44
USP48-210ENST00000489108 MOSPD3O75425 235 aa17.83■□□□□ 0.44
USP48-210ENST00000489108 EDN1P05305 212 aa17.83■□□□□ 0.44
USP48-210ENST00000489108 ATF2P15336 505 aa17.83■□□□□ 0.44
USP48-210ENST00000489108 GJA1P17302 382 aa17.83■□□□□ 0.44
USP48-210ENST00000489108 LIG1P18858 919 aa17.83■□□□□ 0.44
USP48-210ENST00000489108 HOXC13P31276 330 aa17.83■□□□□ 0.44
USP48-210ENST00000489108 PTGDRQ13258 359 aa17.83■□□□□ 0.44
USP48-210ENST00000489108 CYP4A22Q5TCH4 519 aa17.83■□□□□ 0.44
USP48-210ENST00000489108 PDZD4Q76G19 769 aaPredicted RBP17.83■□□□□ 0.44
USP48-210ENST00000489108 TCEAL8Q8IYN2 117 aa17.83■□□□□ 0.44
USP48-210ENST00000489108 ZNF274Q96GC6 653 aaPredicted RBP17.83■□□□□ 0.44
USP48-210ENST00000489108 ADPGKQ9BRR6 497 aa17.83■□□□□ 0.44
USP48-210ENST00000489108 PDCD11Q14690 1871 aaKnown RBP17.82■□□□□ 0.44
USP48-210ENST00000489108 NCANO14594 1321 aa17.82■□□□□ 0.44
USP48-210ENST00000489108 DTNBO60941 627 aa17.82■□□□□ 0.44
USP48-210ENST00000489108 PRKCBP05771 671 aa17.82■□□□□ 0.44
USP48-210ENST00000489108 XRCC6P12956 609 aaKnown RBP eCLIP17.82■□□□□ 0.44
USP48-210ENST00000489108 SHC2P98077 582 aa17.82■□□□□ 0.44
USP48-210ENST00000489108 SF3A2Q15428 464 aaKnown RBP17.82■□□□□ 0.44
USP48-210ENST00000489108 MAPK6Q16659 721 aa17.82■□□□□ 0.44
USP48-210ENST00000489108 AASDHQ4L235 1098 aaPredicted RBP17.82■□□□□ 0.44
USP48-210ENST00000489108 CPLX2Q6PUV4 134 aaKnown RBP17.82■□□□□ 0.44
USP48-210ENST00000489108 CEP68Q76N32 757 aa17.82■□□□□ 0.44
USP48-210ENST00000489108 RUFY3Q7L099 469 aa17.82■□□□□ 0.44
USP48-210ENST00000489108 MFSD6LQ8IWD5 586 aa17.82■□□□□ 0.44
USP48-210ENST00000489108 DEPDC1BQ8WUY9 529 aa17.82■□□□□ 0.44
USP48-210ENST00000489108 BSNDQ8WZ55 320 aa17.82■□□□□ 0.44
USP48-210ENST00000489108 UROC1Q96N76 676 aa17.82■□□□□ 0.44
USP48-210ENST00000489108 C2orf40Q9H1Z8 148 aa17.82■□□□□ 0.44
USP48-210ENST00000489108 RXFP3Q9NSD7 469 aa17.82■□□□□ 0.44
USP48-210ENST00000489108 C2orf42Q9NWW7 574 aa17.82■□□□□ 0.44
USP48-210ENST00000489108 INSL5Q9Y5Q6 135 aa17.82■□□□□ 0.44
USP48-210ENST00000489108 GREB1Q4ZG55 1949 aa17.81■□□□□ 0.44
USP48-210ENST00000489108 HEPACAM2A8MVW5 462 aa17.81■□□□□ 0.44
USP48-210ENST00000489108 ARNTLO00327 626 aa17.81■□□□□ 0.44
USP48-210ENST00000489108 ACKR2O00590 384 aa17.81■□□□□ 0.44
USP48-210ENST00000489108 AXIN1O15169 862 aa17.81■□□□□ 0.44
USP48-210ENST00000489108 MYL4P12829 197 aa17.81■□□□□ 0.44
USP48-210ENST00000489108 ATP2B1P20020 1258 aa17.81■□□□□ 0.44
USP48-210ENST00000489108 LIMK1P53667 647 aa17.81■□□□□ 0.44
USP48-210ENST00000489108 CCDC6Q16204 474 aa17.81■□□□□ 0.44
USP48-210ENST00000489108 WDR44Q5JSH3 913 aa17.81■□□□□ 0.44
USP48-210ENST00000489108 Q6ZS52 159 aa17.81■□□□□ 0.44
USP48-210ENST00000489108 ZSCAN18Q8TBC5 510 aaPredicted RBP17.81■□□□□ 0.44
USP48-210ENST00000489108 CSGALNACT1Q8TDX6 532 aa17.81■□□□□ 0.44
USP48-210ENST00000489108 ZNF512Q96ME7 567 aaPredicted RBP17.81■□□□□ 0.44
USP48-210ENST00000489108 ARRDC1-AS1Q9H2J1 176 aa17.81■□□□□ 0.44
USP48-210ENST00000489108 TTC12Q9H892 705 aaPredicted RBP17.81■□□□□ 0.44
USP48-210ENST00000489108 CEP72Q9P209 647 aa17.81■□□□□ 0.44
USP48-210ENST00000489108 PAPSS2O95340 614 aaPredicted RBP17.8■□□□□ 0.44
USP48-210ENST00000489108 TXKP42681 527 aa17.8■□□□□ 0.44
USP48-210ENST00000489108 SOX9P48436 509 aa17.8■□□□□ 0.44
USP48-210ENST00000489108 MLLT6P55198 1093 aaPredicted RBP17.8■□□□□ 0.44
USP48-210ENST00000489108 SOX4Q06945 474 aaPredicted RBP17.8■□□□□ 0.44
USP48-210ENST00000489108 COL9A2Q14055 689 aaPredicted RBP17.8■□□□□ 0.44
USP48-210ENST00000489108 LRRC32Q14392 662 aa17.8■□□□□ 0.44
USP48-210ENST00000489108 IQCEQ6IPM2 695 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms