RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 RSPH3Q86UC2 560 aa4.9□□□□□ -1.63
RFC4-213ENST00000489028 MAPKAPK5Q8IW41 473 aa4.9□□□□□ -1.63
RFC4-213ENST00000489028 NSUN6Q8TEA1 469 aaKnown RBP4.9□□□□□ -1.63
RFC4-213ENST00000489028 GSTO2Q9H4Y5 243 aa4.9□□□□□ -1.63
RFC4-213ENST00000489028 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.9□□□□□ -1.63
RFC4-213ENST00000489028 ATP11BQ9Y2G3 1177 aa4.9□□□□□ -1.63
RFC4-213ENST00000489028 SPEF1Q9Y4P9 236 aa4.9□□□□□ -1.63
RFC4-213ENST00000489028 LRRC14BA6NHZ5 514 aa4.89□□□□□ -1.63
RFC4-213ENST00000489028 GRM6O15303 877 aa4.89□□□□□ -1.63
RFC4-213ENST00000489028 FOXN1O15353 648 aa4.89□□□□□ -1.63
RFC4-213ENST00000489028 SPDEFO95238 335 aa4.89□□□□□ -1.63
RFC4-213ENST00000489028 SPATA31D3P0C874 917 aa4.89□□□□□ -1.63
RFC4-213ENST00000489028 IBSPP21815 317 aaPredicted RBP4.89□□□□□ -1.63
RFC4-213ENST00000489028 CCND1P24385 295 aa4.89□□□□□ -1.63
RFC4-213ENST00000489028 DDX6P26196 483 aaKnown RBP eCLIP4.89□□□□□ -1.63
RFC4-213ENST00000489028 ZEB1P37275 1124 aaPredicted RBP4.89□□□□□ -1.63
RFC4-213ENST00000489028 RECQLP46063 649 aaPredicted RBP4.89□□□□□ -1.63
RFC4-213ENST00000489028 EXOSC10Q01780 885 aaKnown RBP4.89□□□□□ -1.63
RFC4-213ENST00000489028 TLE1Q04724 770 aa4.89□□□□□ -1.63
RFC4-213ENST00000489028 SCAPQ12770 1279 aa4.89□□□□□ -1.63
RFC4-213ENST00000489028 SPATA31D4Q6ZUB0 917 aa4.89□□□□□ -1.63
RFC4-213ENST00000489028 ARHGEF19Q8IW93 802 aa4.89□□□□□ -1.63
RFC4-213ENST00000489028 ASB10Q8WXI3 467 aa4.89□□□□□ -1.63
RFC4-213ENST00000489028 MARS2Q96GW9 593 aaKnown RBP4.89□□□□□ -1.63
RFC4-213ENST00000489028 CLPTM1LQ96KA5 538 aa4.89□□□□□ -1.63
RFC4-213ENST00000489028 TTPALQ9BTX7 342 aa4.89□□□□□ -1.63
RFC4-213ENST00000489028 WDR11Q9BZH6 1224 aa4.89□□□□□ -1.63
RFC4-213ENST00000489028 SERHL2Q9H4I8 314 aa4.89□□□□□ -1.63
RFC4-213ENST00000489028 VSX1Q9NZR4 365 aaPredicted RBP4.89□□□□□ -1.63
RFC4-213ENST00000489028 HSFX1Q9UBD0 423 aa4.89□□□□□ -1.63
RFC4-213ENST00000489028 COL4A3Q01955 1670 aa4.89□□□□□ -1.63
RFC4-213ENST00000489028 hCG_2014768A0A024R1R8 64 aa4.88□□□□□ -1.63
RFC4-213ENST00000489028 ZFPL1O95159 310 aa4.88□□□□□ -1.63
RFC4-213ENST00000489028 CD1AP06126 327 aa4.88□□□□□ -1.63
RFC4-213ENST00000489028 FCER1AP12319 257 aa4.88□□□□□ -1.63
RFC4-213ENST00000489028 PROZP22891 400 aa4.88□□□□□ -1.63
RFC4-213ENST00000489028 NEK2P51955 445 aa4.88□□□□□ -1.63
RFC4-213ENST00000489028 INHBCP55103 352 aa4.88□□□□□ -1.63
RFC4-213ENST00000489028 TGFB2P61812 414 aa4.88□□□□□ -1.63
RFC4-213ENST00000489028 HSD11B2P80365 405 aa4.88□□□□□ -1.63
RFC4-213ENST00000489028 COL10A1Q03692 680 aa4.88□□□□□ -1.63
RFC4-213ENST00000489028 PTPAQ15257 358 aa4.88□□□□□ -1.63
RFC4-213ENST00000489028 TMEM240Q5SV17 173 aa4.88□□□□□ -1.63
RFC4-213ENST00000489028 LAIR1Q6GTX8 287 aa4.88□□□□□ -1.63
RFC4-213ENST00000489028 Q6YL49 198 aa4.88□□□□□ -1.63
RFC4-213ENST00000489028 ZBTB46Q86UZ6 589 aa4.88□□□□□ -1.63
RFC4-213ENST00000489028 TMEM132CQ8N3T6 1108 aa4.88□□□□□ -1.63
RFC4-213ENST00000489028 CPA6Q8N4T0 437 aa4.88□□□□□ -1.63
RFC4-213ENST00000489028 BEND2Q8NDZ0 799 aa4.88□□□□□ -1.63
RFC4-213ENST00000489028 NACC2Q96BF6 587 aa4.88□□□□□ -1.63
RFC4-213ENST00000489028 CHMP4CQ96CF2 233 aa4.88□□□□□ -1.63
RFC4-213ENST00000489028 AGAP2Q99490 1192 aa4.88□□□□□ -1.63
RFC4-213ENST00000489028 TLR10Q9BXR5 811 aa4.88□□□□□ -1.63
RFC4-213ENST00000489028 RNPEPQ9H4A4 650 aa4.88□□□□□ -1.63
RFC4-213ENST00000489028 DDX56Q9NY93 547 aaKnown RBP4.88□□□□□ -1.63
RFC4-213ENST00000489028 SLC45A2Q9UMX9 530 aa4.88□□□□□ -1.63
RFC4-213ENST00000489028 LUC7L2Q9Y383 392 aaKnown RBP4.88□□□□□ -1.63
RFC4-213ENST00000489028 A0A087X1B8 175 aa4.87□□□□□ -1.63
RFC4-213ENST00000489028 SNUPNO95149 360 aaKnown RBP4.87□□□□□ -1.63
RFC4-213ENST00000489028 CKBP12277 381 aa4.87□□□□□ -1.63
RFC4-213ENST00000489028 ALAS1P13196 640 aa4.87□□□□□ -1.63
RFC4-213ENST00000489028 CREMQ03060 361 aa4.87□□□□□ -1.63
RFC4-213ENST00000489028 FSTL1Q12841 308 aa4.87□□□□□ -1.63
RFC4-213ENST00000489028 RAB39AQ14964 217 aa4.87□□□□□ -1.63
RFC4-213ENST00000489028 PABPC1LQ4VXU2 614 aaKnown RBP4.87□□□□□ -1.63
RFC4-213ENST00000489028 CATIPQ7Z7H3 387 aa4.87□□□□□ -1.63
RFC4-213ENST00000489028 MRGPRGQ86SM5 289 aa4.87□□□□□ -1.63
RFC4-213ENST00000489028 FITM2Q8N6M3 262 aa4.87□□□□□ -1.63
RFC4-213ENST00000489028 TBC1D15Q8TC07 691 aa4.87□□□□□ -1.63
RFC4-213ENST00000489028 HOOK2Q96ED9 719 aa4.87□□□□□ -1.63
RFC4-213ENST00000489028 CEP89Q96ST8 783 aa4.87□□□□□ -1.63
RFC4-213ENST00000489028 PRRX2Q99811 253 aa4.87□□□□□ -1.63
RFC4-213ENST00000489028 VRK1Q99986 396 aaPredicted RBP4.87□□□□□ -1.63
RFC4-213ENST00000489028 SYBUQ9NX95 663 aa4.87□□□□□ -1.63
RFC4-213ENST00000489028 DMRT1Q9Y5R6 373 aa4.87□□□□□ -1.63
RFC4-213ENST00000489028 CFAP20Q9Y6A4 193 aaKnown RBP4.87□□□□□ -1.63
RFC4-213ENST00000489028 NT5C1B-RDH14C9J2C7 533 aa4.86□□□□□ -1.63
RFC4-213ENST00000489028 PPFIA4O75335 1185 aa4.86□□□□□ -1.63
RFC4-213ENST00000489028 CDKL5O76039 1030 aa4.86□□□□□ -1.63
RFC4-213ENST00000489028 HAUS5O94927 633 aa4.86□□□□□ -1.63
RFC4-213ENST00000489028 AGFG2O95081 481 aa4.86□□□□□ -1.63
RFC4-213ENST00000489028 PDCP20941 246 aa4.86□□□□□ -1.63
RFC4-213ENST00000489028 ANAPC15P60006 121 aa4.86□□□□□ -1.63
RFC4-213ENST00000489028 CXADRP78310 365 aa4.86□□□□□ -1.63
RFC4-213ENST00000489028 GUCY1B3Q02153 619 aa4.86□□□□□ -1.63
RFC4-213ENST00000489028 SNAPC2Q13487 334 aa4.86□□□□□ -1.63
RFC4-213ENST00000489028 KHDC1Q4VXA5 237 aaKnown RBP4.86□□□□□ -1.63
RFC4-213ENST00000489028 GADL1Q6ZQY3 521 aa4.86□□□□□ -1.63
RFC4-213ENST00000489028 GPR149Q86SP6 731 aa4.86□□□□□ -1.63
RFC4-213ENST00000489028 MIER2Q8N344 545 aa4.86□□□□□ -1.63
RFC4-213ENST00000489028 PRR18Q8N4B5 295 aa4.86□□□□□ -1.63
RFC4-213ENST00000489028 Q8NA96 180 aa4.86□□□□□ -1.63
RFC4-213ENST00000489028 IL17RDQ8NFM7 739 aa4.86□□□□□ -1.63
RFC4-213ENST00000489028 NUP133Q8WUM0 1156 aa4.86□□□□□ -1.63
RFC4-213ENST00000489028 RNF31Q96EP0 1072 aa4.86□□□□□ -1.63
RFC4-213ENST00000489028 ALOXE3Q9BYJ1 711 aa4.86□□□□□ -1.63
RFC4-213ENST00000489028 REXO4Q9GZR2 422 aaKnown RBP4.86□□□□□ -1.63
RFC4-213ENST00000489028 TYW1Q9NV66 732 aaKnown RBP4.86□□□□□ -1.63
RFC4-213ENST00000489028 CALCOCO1Q9P1Z2 691 aa4.86□□□□□ -1.63
RFC4-213ENST00000489028 PIPSLA2A3N6 862 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms