RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 NCOA4Q13772 614 aa17.28■□□□□ 0.36
CLDN11-208ENST00000488989 NAB2Q15742 525 aa17.28■□□□□ 0.36
CLDN11-208ENST00000488989 KLHDC7AQ5VTJ3 777 aa17.28■□□□□ 0.36
CLDN11-208ENST00000488989 BEST2Q8NFU1 509 aa17.28■□□□□ 0.36
CLDN11-208ENST00000488989 ZFP42Q96MM3 310 aa17.28■□□□□ 0.36
CLDN11-208ENST00000488989 MIOSQ9NXC5 875 aa17.28■□□□□ 0.36
CLDN11-208ENST00000488989 DPP3Q9NY33 737 aa17.28■□□□□ 0.36
CLDN11-208ENST00000488989 SIX4Q9UIU6 781 aa17.28■□□□□ 0.36
CLDN11-208ENST00000488989 ITGA11Q9UKX5 1188 aa17.28■□□□□ 0.36
CLDN11-208ENST00000488989 A0A1W2PQJ5 194 aa17.27■□□□□ 0.36
CLDN11-208ENST00000488989 EVI5O60447 810 aa17.27■□□□□ 0.36
CLDN11-208ENST00000488989 BAIAP3O94812 1187 aa17.27■□□□□ 0.36
CLDN11-208ENST00000488989 STAU1O95793 577 aaKnown RBP17.27■□□□□ 0.36
CLDN11-208ENST00000488989 CST3P01034 146 aaPredicted RBP17.27■□□□□ 0.36
CLDN11-208ENST00000488989 GYPCP04921 128 aa17.27■□□□□ 0.36
CLDN11-208ENST00000488989 LRPAP1P30533 357 aa17.27■□□□□ 0.36
CLDN11-208ENST00000488989 GLRA4Q5JXX5 417 aa17.27■□□□□ 0.36
CLDN11-208ENST00000488989 CLLU1OSQ5K130 101 aa17.27■□□□□ 0.36
CLDN11-208ENST00000488989 NPAS4Q8IUM7 802 aa17.27■□□□□ 0.36
CLDN11-208ENST00000488989 DRC7Q8IY82 874 aa17.27■□□□□ 0.36
CLDN11-208ENST00000488989 NEK11Q8NG66 645 aa17.27■□□□□ 0.36
CLDN11-208ENST00000488989 BADQ92934 168 aa17.27■□□□□ 0.36
CLDN11-208ENST00000488989 RPS6KC1Q96S38 1066 aa17.27■□□□□ 0.36
CLDN11-208ENST00000488989 VRTNQ9H8Y1 702 aa17.27■□□□□ 0.36
CLDN11-208ENST00000488989 SLC38A7Q9NVC3 462 aa17.27■□□□□ 0.36
CLDN11-208ENST00000488989 PLAGL2Q9UPG8 496 aa17.27■□□□□ 0.36
CLDN11-208ENST00000488989 PCDHB7Q9Y5E2 793 aa17.27■□□□□ 0.36
CLDN11-208ENST00000488989 ANO9A1A5B4 782 aa17.26■□□□□ 0.35
CLDN11-208ENST00000488989 EPHB6O15197 1021 aa17.26■□□□□ 0.35
CLDN11-208ENST00000488989 HOXA2O43364 376 aa17.26■□□□□ 0.35
CLDN11-208ENST00000488989 PHACTR2O75167 634 aa17.26■□□□□ 0.35
CLDN11-208ENST00000488989 LRRN2O75325 713 aa17.26■□□□□ 0.35
CLDN11-208ENST00000488989 ASS1P00966 412 aaKnown RBP17.26■□□□□ 0.35
CLDN11-208ENST00000488989 THP07101 528 aa17.26■□□□□ 0.35
CLDN11-208ENST00000488989 ACTN1P12814 892 aa17.26■□□□□ 0.35
CLDN11-208ENST00000488989 RFX1P22670 979 aa17.26■□□□□ 0.35
CLDN11-208ENST00000488989 ATICP31939 592 aa17.26■□□□□ 0.35
CLDN11-208ENST00000488989 PIK3CAP42336 1068 aa17.26■□□□□ 0.35
CLDN11-208ENST00000488989 SCNN1GP51170 649 aa17.26■□□□□ 0.35
CLDN11-208ENST00000488989 AFF1P51825 1210 aaKnown RBP17.26■□□□□ 0.35
CLDN11-208ENST00000488989 FPGSQ05932 587 aa17.26■□□□□ 0.35
CLDN11-208ENST00000488989 GRIK3Q13003 919 aa17.26■□□□□ 0.35
CLDN11-208ENST00000488989 ARID5BQ14865 1188 aa17.26■□□□□ 0.35
CLDN11-208ENST00000488989 SCARA3Q6AZY7 606 aa17.26■□□□□ 0.35
CLDN11-208ENST00000488989 SMYD5Q6GMV2 418 aa17.26■□□□□ 0.35
CLDN11-208ENST00000488989 GLB1LQ6UWU2 654 aa17.26■□□□□ 0.35
CLDN11-208ENST00000488989 C16orf59Q7L2K0 433 aa17.26■□□□□ 0.35
CLDN11-208ENST00000488989 TNS4Q8IZW8 715 aa17.26■□□□□ 0.35
CLDN11-208ENST00000488989 SPC24Q8NBT2 197 aa17.26■□□□□ 0.35
CLDN11-208ENST00000488989 RNF169Q8NCN4 708 aa17.26■□□□□ 0.35
CLDN11-208ENST00000488989 TAF4BQ92750 862 aa17.26■□□□□ 0.35
CLDN11-208ENST00000488989 C18orf25Q96B23 403 aaPredicted RBP17.26■□□□□ 0.35
CLDN11-208ENST00000488989 FAXDC2Q96IV6 333 aa17.26■□□□□ 0.35
CLDN11-208ENST00000488989 PCMTD1Q96MG8 357 aaPredicted RBP17.26■□□□□ 0.35
CLDN11-208ENST00000488989 NAA15Q9BXJ9 866 aaKnown RBP17.26■□□□□ 0.35
CLDN11-208ENST00000488989 XYLT2Q9H1B5 865 aa17.26■□□□□ 0.35
CLDN11-208ENST00000488989 FAM207AQ9NSI2 230 aaPredicted RBP17.26■□□□□ 0.35
CLDN11-208ENST00000488989 CEP72Q9P209 647 aa17.26■□□□□ 0.35
CLDN11-208ENST00000488989 APEX2Q9UBZ4 518 aa17.26■□□□□ 0.35
CLDN11-208ENST00000488989 TUBGCP4Q9UGJ1 667 aa17.26■□□□□ 0.35
CLDN11-208ENST00000488989 CAPN11Q9UMQ6 739 aa17.26■□□□□ 0.35
CLDN11-208ENST00000488989 TULP1O00294 542 aaPredicted RBP17.25■□□□□ 0.35
CLDN11-208ENST00000488989 ITGB3P05106 788 aa17.25■□□□□ 0.35
CLDN11-208ENST00000488989 UCHL3P15374 230 aa17.25■□□□□ 0.35
CLDN11-208ENST00000488989 TRIM21P19474 475 aaKnown RBP17.25■□□□□ 0.35
CLDN11-208ENST00000488989 GUCY2FP51841 1108 aa17.25■□□□□ 0.35
CLDN11-208ENST00000488989 RBP5P82980 135 aa17.25■□□□□ 0.35
CLDN11-208ENST00000488989 SOX4Q06945 474 aaPredicted RBP17.25■□□□□ 0.35
CLDN11-208ENST00000488989 TRPC3Q13507 836 aa17.25■□□□□ 0.35
CLDN11-208ENST00000488989 SGSM1Q2NKQ1 1148 aa17.25■□□□□ 0.35
CLDN11-208ENST00000488989 PHLDB3Q6NSJ2 640 aa17.25■□□□□ 0.35
CLDN11-208ENST00000488989 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.25■□□□□ 0.35
CLDN11-208ENST00000488989 LRRC52Q8N7C0 313 aa17.25■□□□□ 0.35
CLDN11-208ENST00000488989 HELQQ8TDG4 1101 aa17.25■□□□□ 0.35
CLDN11-208ENST00000488989 KANSL3Q9P2N6 904 aa17.25■□□□□ 0.35
CLDN11-208ENST00000488989 COL4A6Q14031 1691 aa17.25■□□□□ 0.35
CLDN11-208ENST00000488989 RNF225M0QZC1 329 aaPredicted RBP17.24■□□□□ 0.35
CLDN11-208ENST00000488989 PIRO00625 290 aa17.24■□□□□ 0.35
CLDN11-208ENST00000488989 ACRP10323 421 aa17.24■□□□□ 0.35
CLDN11-208ENST00000488989 FGFR1P11362 822 aa17.24■□□□□ 0.35
CLDN11-208ENST00000488989 POLR2BP30876 1174 aaKnown RBP17.24■□□□□ 0.35
CLDN11-208ENST00000488989 FXR1P51114 621 aaKnown RBP eCLIP17.24■□□□□ 0.35
CLDN11-208ENST00000488989 MYL6P60660 151 aa17.24■□□□□ 0.35
CLDN11-208ENST00000488989 APBA1Q02410 837 aa17.24■□□□□ 0.35
CLDN11-208ENST00000488989 NOMO2Q5JPE7 1267 aa17.24■□□□□ 0.35
CLDN11-208ENST00000488989 WDR44Q5JSH3 913 aa17.24■□□□□ 0.35
CLDN11-208ENST00000488989 C9orf57Q5W0N0 161 aa17.24■□□□□ 0.35
CLDN11-208ENST00000488989 PPFIBP1Q86W92 1011 aa17.24■□□□□ 0.35
CLDN11-208ENST00000488989 BAP1Q92560 729 aa17.24■□□□□ 0.35
CLDN11-208ENST00000488989 TOP1MTQ969P6 601 aa17.24■□□□□ 0.35
CLDN11-208ENST00000488989 FAM81BQ96LP2 452 aa17.24■□□□□ 0.35
CLDN11-208ENST00000488989 NT5C1BQ96P26 610 aa17.24■□□□□ 0.35
CLDN11-208ENST00000488989 CASD1Q96PB1 797 aa17.24■□□□□ 0.35
CLDN11-208ENST00000488989 APOBEC3GQ9HC16 384 aaKnown RBP17.24■□□□□ 0.35
CLDN11-208ENST00000488989 LRFN2Q9ULH4 789 aa17.24■□□□□ 0.35
CLDN11-208ENST00000488989 FHOD1Q9Y613 1164 aa17.24■□□□□ 0.35
CLDN11-208ENST00000488989 GOLGA6L6A8MZA4 724 aa17.23■□□□□ 0.35
CLDN11-208ENST00000488989 FGBP02675 491 aa17.23■□□□□ 0.35
CLDN11-208ENST00000488989 TPM1P09493 284 aa17.23■□□□□ 0.35
CLDN11-208ENST00000488989 CASP14P31944 242 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms