RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 CBWD3Q5JTY5 395 aa13.31□□□□□ -0.28
TRAIP-209ENST00000488860 MIIPQ5JXC2 388 aa13.31□□□□□ -0.28
TRAIP-209ENST00000488860 CBWD5Q5RIA9 395 aa13.31□□□□□ -0.28
TRAIP-209ENST00000488860 TDRD10Q5VZ19 366 aaKnown RBP13.31□□□□□ -0.28
TRAIP-209ENST00000488860 NT5DC4Q86YG4 428 aa13.31□□□□□ -0.28
TRAIP-209ENST00000488860 CRIPAKQ8N1N5 446 aa13.31□□□□□ -0.28
TRAIP-209ENST00000488860 GSTCDQ8NEC7 633 aa13.31□□□□□ -0.28
TRAIP-209ENST00000488860 ZNF516Q92618 1163 aa13.31□□□□□ -0.28
TRAIP-209ENST00000488860 TMEM8AQ9HCN3 771 aa13.31□□□□□ -0.28
TRAIP-209ENST00000488860 DPP3Q9NY33 737 aa13.31□□□□□ -0.28
TRAIP-209ENST00000488860 KANSL3Q9P2N6 904 aa13.31□□□□□ -0.28
TRAIP-209ENST00000488860 R3HCC1Q9Y3T6 440 aaKnown RBP13.31□□□□□ -0.28
TRAIP-209ENST00000488860 PLXNA4Q9HCM2 1894 aa13.31□□□□□ -0.28
TRAIP-209ENST00000488860 GOLGA6L3A6NEY3 463 aa13.3□□□□□ -0.28
TRAIP-209ENST00000488860 INPPL1O15357 1258 aa13.3□□□□□ -0.28
TRAIP-209ENST00000488860 N4BP1O75113 896 aaKnown RBP13.3□□□□□ -0.28
TRAIP-209ENST00000488860 POLR2BP30876 1174 aaKnown RBP13.3□□□□□ -0.28
TRAIP-209ENST00000488860 GTF2H1P32780 548 aa13.3□□□□□ -0.28
TRAIP-209ENST00000488860 RABGGTBP53611 331 aa13.3□□□□□ -0.28
TRAIP-209ENST00000488860 AP3M2P53677 418 aa13.3□□□□□ -0.28
TRAIP-209ENST00000488860 TUSC3Q13454 348 aa13.3□□□□□ -0.28
TRAIP-209ENST00000488860 TRPC3Q13507 836 aa13.3□□□□□ -0.28
TRAIP-209ENST00000488860 FKBP15Q5T1M5 1219 aa13.3□□□□□ -0.28
TRAIP-209ENST00000488860 RASIP1Q5U651 963 aa13.3□□□□□ -0.28
TRAIP-209ENST00000488860 KRT39Q6A163 491 aa13.3□□□□□ -0.28
TRAIP-209ENST00000488860 CHRDL2Q6WN34 429 aa13.3□□□□□ -0.28
TRAIP-209ENST00000488860 CMTR2Q8IYT2 770 aaKnown RBP13.3□□□□□ -0.28
TRAIP-209ENST00000488860 C1orf127Q8N9H9 656 aa13.3□□□□□ -0.28
TRAIP-209ENST00000488860 PHOSPHO2Q8TCD6 241 aa13.3□□□□□ -0.28
TRAIP-209ENST00000488860 RABGGTAQ92696 567 aa13.3□□□□□ -0.28
TRAIP-209ENST00000488860 TSPAN18Q96SJ8 248 aa13.3□□□□□ -0.28
TRAIP-209ENST00000488860 NDST4Q9H3R1 872 aa13.3□□□□□ -0.28
TRAIP-209ENST00000488860 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.3□□□□□ -0.28
TRAIP-209ENST00000488860 IFNKQ9P0W0 207 aa13.3□□□□□ -0.28
TRAIP-209ENST00000488860 LGALS16A8MUM7 142 aa13.29□□□□□ -0.28
TRAIP-209ENST00000488860 GRXCR1A8MXD5 290 aa13.29□□□□□ -0.28
TRAIP-209ENST00000488860 PODXLO00592 558 aa13.29□□□□□ -0.28
TRAIP-209ENST00000488860 B4GALT3O60512 393 aa13.29□□□□□ -0.28
TRAIP-209ENST00000488860 DDHD2O94830 711 aa13.29□□□□□ -0.28
TRAIP-209ENST00000488860 HLA-DRAP01903 254 aa13.29□□□□□ -0.28
TRAIP-209ENST00000488860 OR1G1P47890 313 aa13.29□□□□□ -0.28
TRAIP-209ENST00000488860 UBASH3AP57075 661 aa13.29□□□□□ -0.28
TRAIP-209ENST00000488860 CLDN10P78369 228 aa13.29□□□□□ -0.28
TRAIP-209ENST00000488860 NCOA4Q13772 614 aa13.29□□□□□ -0.28
TRAIP-209ENST00000488860 ZBTB6Q15916 424 aa13.29□□□□□ -0.28
TRAIP-209ENST00000488860 ZACNQ401N2 412 aa13.29□□□□□ -0.28
TRAIP-209ENST00000488860 FAM109BQ6ICB4 259 aaPredicted RBP13.29□□□□□ -0.28
TRAIP-209ENST00000488860 SV2AQ7L0J3 742 aa13.29□□□□□ -0.28
TRAIP-209ENST00000488860 APTXQ7Z2E3 356 aaKnown RBP13.29□□□□□ -0.28
TRAIP-209ENST00000488860 TRAPPC11Q7Z392 1133 aa13.29□□□□□ -0.28
TRAIP-209ENST00000488860 ZNF280BQ86YH2 543 aa13.29□□□□□ -0.28
TRAIP-209ENST00000488860 RSPH1Q8WYR4 309 aa13.29□□□□□ -0.28
TRAIP-209ENST00000488860 ZNF689Q96CS4 500 aaPredicted RBP13.29□□□□□ -0.28
TRAIP-209ENST00000488860 NRDE2Q9H7Z3 1164 aa13.29□□□□□ -0.28
TRAIP-209ENST00000488860 RC3H2Q9HBD1 1191 aaKnown RBP13.29□□□□□ -0.28
TRAIP-209ENST00000488860 GCNT4Q9P109 453 aa13.29□□□□□ -0.28
TRAIP-209ENST00000488860 DNAJB4Q9UDY4 337 aa13.29□□□□□ -0.28
TRAIP-209ENST00000488860 ITGA11Q9UKX5 1188 aa13.29□□□□□ -0.28
TRAIP-209ENST00000488860 AGAP1Q9UPQ3 857 aa13.29□□□□□ -0.28
TRAIP-209ENST00000488860 PRG3Q9Y2Y8 225 aaPredicted RBP13.29□□□□□ -0.28
TRAIP-209ENST00000488860 INSL6Q9Y581 213 aa13.29□□□□□ -0.28
TRAIP-209ENST00000488860 MRPL42Q9Y6G3 142 aaKnown RBP13.29□□□□□ -0.28
TRAIP-209ENST00000488860 PPEF2O14830 753 aa13.28□□□□□ -0.28
TRAIP-209ENST00000488860 VNN1O95497 513 aa13.28□□□□□ -0.28
TRAIP-209ENST00000488860 C4BPAP04003 597 aaKnown RBP13.28□□□□□ -0.28
TRAIP-209ENST00000488860 CYP3A5P20815 502 aa13.28□□□□□ -0.28
TRAIP-209ENST00000488860 PBX3P40426 434 aa13.28□□□□□ -0.28
TRAIP-209ENST00000488860 CLCNKBP51801 687 aa13.28□□□□□ -0.28
TRAIP-209ENST00000488860 HTRA4P83105 476 aaPredicted RBP13.28□□□□□ -0.28
TRAIP-209ENST00000488860 UBXN1Q04323 297 aa13.28□□□□□ -0.28
TRAIP-209ENST00000488860 CETN1Q12798 172 aa13.28□□□□□ -0.28
TRAIP-209ENST00000488860 NAB2Q15742 525 aa13.28□□□□□ -0.28
TRAIP-209ENST00000488860 PTPN21Q16825 1174 aa13.28□□□□□ -0.28
TRAIP-209ENST00000488860 C9orf57Q5W0N0 161 aa13.28□□□□□ -0.28
TRAIP-209ENST00000488860 SCARA3Q6AZY7 606 aa13.28□□□□□ -0.28
TRAIP-209ENST00000488860 TDHQ8IZJ6 230 aa13.28□□□□□ -0.28
TRAIP-209ENST00000488860 FIBCD1Q8N539 461 aa13.28□□□□□ -0.28
TRAIP-209ENST00000488860 TAS1R2Q8TE23 839 aa13.28□□□□□ -0.28
TRAIP-209ENST00000488860 HASPINQ8TF76 798 aa13.28□□□□□ -0.28
TRAIP-209ENST00000488860 ELMO3Q96BJ8 720 aa13.28□□□□□ -0.28
TRAIP-209ENST00000488860 PCMTD1Q96MG8 357 aaPredicted RBP13.28□□□□□ -0.28
TRAIP-209ENST00000488860 ZNF560Q96MR9 790 aa13.28□□□□□ -0.28
TRAIP-209ENST00000488860 RAD9AQ99638 391 aa13.28□□□□□ -0.28
TRAIP-209ENST00000488860 PAAF1Q9BRP4 392 aa13.28□□□□□ -0.28
TRAIP-209ENST00000488860 CRACR2AQ9BSW2 395 aa13.28□□□□□ -0.28
TRAIP-209ENST00000488860 SIX4Q9UIU6 781 aa13.28□□□□□ -0.28
TRAIP-209ENST00000488860 VWA8A3KMH1 1905 aa13.28□□□□□ -0.28
TRAIP-209ENST00000488860 COL4A4P53420 1690 aaPredicted RBP13.28□□□□□ -0.28
TRAIP-209ENST00000488860 A0A1B0GTH6 734 aa13.27□□□□□ -0.29
TRAIP-209ENST00000488860 LCHNA4D1U4 455 aa13.27□□□□□ -0.29
TRAIP-209ENST00000488860 TEX33O43247 280 aa13.27□□□□□ -0.29
TRAIP-209ENST00000488860 CBFA2T2O43439 604 aa13.27□□□□□ -0.29
TRAIP-209ENST00000488860 TPM3P06753 285 aa13.27□□□□□ -0.29
TRAIP-209ENST00000488860 MYOGP15173 224 aa13.27□□□□□ -0.29
TRAIP-209ENST00000488860 LRPAP1P30533 357 aa13.27□□□□□ -0.29
TRAIP-209ENST00000488860 BMP8BP34820 402 aa13.27□□□□□ -0.29
TRAIP-209ENST00000488860 SLC11A1P49279 550 aa13.27□□□□□ -0.29
TRAIP-209ENST00000488860 MYL6P60660 151 aa13.27□□□□□ -0.29
TRAIP-209ENST00000488860 RBP5P82980 135 aa13.27□□□□□ -0.29
TRAIP-209ENST00000488860 DSC1Q08554 894 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms