RNA–Protein interactions for RNA: ENST00000488758.1

APOBEC3A-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 2

Gene APOBEC3A, Length 344 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-203ENST00000488758 GOLGA8FQ08AF8 430 aa8.16□□□□□ -1.1
APOBEC3A-203ENST00000488758 GOLGA8DPQ0D2H9 430 aa8.16□□□□□ -1.1
APOBEC3A-203ENST00000488758 FAAP100Q0VG06 881 aa8.16□□□□□ -1.1
APOBEC3A-203ENST00000488758 LRMPQ12912 555 aa8.16□□□□□ -1.1
APOBEC3A-203ENST00000488758 ARID5BQ14865 1188 aa8.16□□□□□ -1.1
APOBEC3A-203ENST00000488758 ZACNQ401N2 412 aa8.16□□□□□ -1.1
APOBEC3A-203ENST00000488758 EPC2Q52LR7 807 aa8.16□□□□□ -1.1
APOBEC3A-203ENST00000488758 KLHDC7AQ5VTJ3 777 aa8.16□□□□□ -1.1
APOBEC3A-203ENST00000488758 JADE1Q6IE81 842 aa8.16□□□□□ -1.1
APOBEC3A-203ENST00000488758 TRIM65Q6PJ69 517 aa8.16□□□□□ -1.1
APOBEC3A-203ENST00000488758 TRAF7Q6Q0C0 670 aa8.16□□□□□ -1.1
APOBEC3A-203ENST00000488758 FAM43BQ6ZT52 329 aaPredicted RBP8.16□□□□□ -1.1
APOBEC3A-203ENST00000488758 RRAGAQ7L523 313 aa8.16□□□□□ -1.1
APOBEC3A-203ENST00000488758 TRAPPC11Q7Z392 1133 aa8.16□□□□□ -1.1
APOBEC3A-203ENST00000488758 NT5DC4Q86YG4 428 aa8.16□□□□□ -1.1
APOBEC3A-203ENST00000488758 LRRC8AQ8IWT6 810 aa8.16□□□□□ -1.1
APOBEC3A-203ENST00000488758 TC2NQ8N9U0 490 aa8.16□□□□□ -1.1
APOBEC3A-203ENST00000488758 FBXL13Q8NEE6 735 aa8.16□□□□□ -1.1
APOBEC3A-203ENST00000488758 OR5B17Q8NGF7 314 aa8.16□□□□□ -1.1
APOBEC3A-203ENST00000488758 OR8K1Q8NGG5 319 aa8.16□□□□□ -1.1
APOBEC3A-203ENST00000488758 SEPT8Q92599 483 aa8.16□□□□□ -1.1
APOBEC3A-203ENST00000488758 PGBD4Q96DM1 585 aa8.16□□□□□ -1.1
APOBEC3A-203ENST00000488758 ZNF830Q96NB3 372 aaPredicted RBP8.16□□□□□ -1.1
APOBEC3A-203ENST00000488758 NT5C1BQ96P26 610 aa8.16□□□□□ -1.1
APOBEC3A-203ENST00000488758 SPAG5Q96R06 1193 aa8.16□□□□□ -1.1
APOBEC3A-203ENST00000488758 TSPAN18Q96SJ8 248 aa8.16□□□□□ -1.1
APOBEC3A-203ENST00000488758 ADAM2Q99965 735 aa8.16□□□□□ -1.1
APOBEC3A-203ENST00000488758 FTHL17Q9BXU8 183 aa8.16□□□□□ -1.1
APOBEC3A-203ENST00000488758 IFIH1Q9BYX4 1025 aaKnown RBP8.16□□□□□ -1.1
APOBEC3A-203ENST00000488758 OSBPL7Q9BZF2 842 aa8.16□□□□□ -1.1
APOBEC3A-203ENST00000488758 NUCKS1Q9H1E3 243 aaKnown RBP8.16□□□□□ -1.1
APOBEC3A-203ENST00000488758 NXF3Q9H4D5 531 aaKnown RBP8.16□□□□□ -1.1
APOBEC3A-203ENST00000488758 UBE2TQ9NPD8 197 aaPredicted RBP8.16□□□□□ -1.1
APOBEC3A-203ENST00000488758 NLRC4Q9NPP4 1024 aa8.16□□□□□ -1.1
APOBEC3A-203ENST00000488758 FAM105AQ9NUU6 356 aa8.16□□□□□ -1.1
APOBEC3A-203ENST00000488758 TMEM39AQ9NV64 488 aa8.16□□□□□ -1.1
APOBEC3A-203ENST00000488758 CEP72Q9P209 647 aa8.16□□□□□ -1.1
APOBEC3A-203ENST00000488758 COQ4Q9Y3A0 265 aa8.16□□□□□ -1.1
APOBEC3A-203ENST00000488758 DAAM1Q9Y4D1 1078 aa8.16□□□□□ -1.1
APOBEC3A-203ENST00000488758 HES2Q9Y543 173 aa8.16□□□□□ -1.1
APOBEC3A-203ENST00000488758 IPPQ9Y573 584 aa8.16□□□□□ -1.1
APOBEC3A-203ENST00000488758 KIAA0100Q14667 2235 aaKnown RBP8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 PTPRJQ12913 1337 aa8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 XPOTO43592 962 aaKnown RBP8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 MFAP3LO75121 409 aa8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 ZNF623O75123 536 aa8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 ZC3H11AO75152 810 aaKnown RBP eCLIP8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 RECQL4O94761 1208 aa8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 NOL4O94818 638 aa8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 HLA-DRAP01903 254 aa8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 KRT19P08727 400 aa8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 CLTBP09497 229 aa8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 UCHL3P15374 230 aa8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 IBSPP21815 317 aaPredicted RBP8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 MFAP3P55082 362 aa8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 CCL23P55773 120 aa8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 NCOA4Q13772 614 aa8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 RAPGEF1Q13905 1077 aa8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 DSC3Q14574 896 aa8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 MBTPS1Q14703 1052 aa8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 TMEM132DQ14C87 1099 aa8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 LRRC26Q2I0M4 334 aa8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 SGSM1Q2NKQ1 1148 aa8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 TDRD10Q5VZ19 366 aaKnown RBP8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 C15orf39Q6ZRI6 1047 aa8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 LAPTM4BQ86VI4 370 aa8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 EFCAB13Q8IY85 973 aa8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 RNF169Q8NCN4 708 aa8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 SMG8Q8ND04 991 aaKnown RBP8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 CCDC112Q8NEF3 446 aa8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 BEST2Q8NFU1 509 aa8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 LMO3Q8TAP4 145 aa8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 TAS1R2Q8TE23 839 aa8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 SEMA4DQ92854 862 aa8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 WNT2BQ93097 391 aa8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 SNX27Q96L92 541 aa8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 FAM81BQ96LP2 452 aa8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 PANX2Q96RD6 677 aa8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 BAG1Q99933 345 aaPredicted RBP8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 TRAIPQ9BWF2 469 aa8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 PPP1R12CQ9BZL4 782 aa8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 IMPG2Q9BZV3 1241 aa8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 MTMR12Q9C0I1 747 aa8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 GANQ9H2C0 597 aa8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 TMX1Q9H3N1 280 aa8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 UBN1Q9NPG3 1134 aa8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 RGS18Q9NS28 235 aa8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 C1orf112Q9NSG2 853 aa8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 KLK14Q9P0G3 267 aa8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 HCSTQ9UBK5 93 aa8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 APEX2Q9UBZ4 518 aa8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 FBXL5Q9UKA1 691 aa8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 DNAJC12Q9UKB3 198 aa8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 DERAQ9Y315 318 aa8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 C2CD2Q9Y426 696 aa8.15□□□□□ -1.1
APOBEC3A-203ENST00000488758 A0A0U1RQF3 1178 aa8.14□□□□□ -1.11
APOBEC3A-203ENST00000488758 RNF225M0QZC1 329 aaPredicted RBP8.14□□□□□ -1.11
APOBEC3A-203ENST00000488758 EPHB6O15197 1021 aa8.14□□□□□ -1.11
APOBEC3A-203ENST00000488758 MGEA5O60502 916 aa8.14□□□□□ -1.11
APOBEC3A-203ENST00000488758 NBNO60934 754 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms