RNA–Protein interactions for RNA: ENST00000488753.1

ATPAF2-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-207ENST00000488753 I3L4J1 428 aa14.26□□□□□ -0.13
ATPAF2-207ENST00000488753 MEFVO15553 781 aaPredicted RBP14.26□□□□□ -0.13
ATPAF2-207ENST00000488753 NARSO43776 548 aaKnown RBP14.26□□□□□ -0.13
ATPAF2-207ENST00000488753 TBC1D4O60343 1298 aa14.26□□□□□ -0.13
ATPAF2-207ENST00000488753 ABLIM3O94929 683 aa14.26□□□□□ -0.13
ATPAF2-207ENST00000488753 PIGRP01833 764 aa14.26□□□□□ -0.13
ATPAF2-207ENST00000488753 CLTAP09496 248 aa14.26□□□□□ -0.13
ATPAF2-207ENST00000488753 HARSP12081 509 aaKnown RBP14.26□□□□□ -0.13
ATPAF2-207ENST00000488753 MRPL58Q14197 206 aaKnown RBP14.26□□□□□ -0.13
ATPAF2-207ENST00000488753 SF3A1Q15459 793 aaKnown RBP14.26□□□□□ -0.13
ATPAF2-207ENST00000488753 VARS2Q5ST30 1063 aaKnown RBP14.26□□□□□ -0.13
ATPAF2-207ENST00000488753 RSPO2Q6UXX9 243 aaPredicted RBP14.26□□□□□ -0.13
ATPAF2-207ENST00000488753 MTSS1LQ765P7 747 aa14.26□□□□□ -0.13
ATPAF2-207ENST00000488753 GPBP1Q86WP2 473 aa14.26□□□□□ -0.13
ATPAF2-207ENST00000488753 RAD54LQ92698 747 aa14.26□□□□□ -0.13
ATPAF2-207ENST00000488753 FGF13Q92913 245 aa14.26□□□□□ -0.13
ATPAF2-207ENST00000488753 BICD1Q96G01 975 aa14.26□□□□□ -0.13
ATPAF2-207ENST00000488753 SUSD3Q96L08 255 aa14.26□□□□□ -0.13
ATPAF2-207ENST00000488753 REEP2Q9BRK0 252 aa14.26□□□□□ -0.13
ATPAF2-207ENST00000488753 CCSER1Q9C0I3 900 aa14.26□□□□□ -0.13
ATPAF2-207ENST00000488753 PARVGQ9HBI0 331 aa14.26□□□□□ -0.13
ATPAF2-207ENST00000488753 AVENQ9NQS1 362 aaPredicted RBP14.26□□□□□ -0.13
ATPAF2-207ENST00000488753 SLC2A4RGQ9NR83 387 aa14.26□□□□□ -0.13
ATPAF2-207ENST00000488753 BLOC1S4Q9NUP1 217 aa14.26□□□□□ -0.13
ATPAF2-207ENST00000488753 MAFFQ9ULX9 164 aa14.26□□□□□ -0.13
ATPAF2-207ENST00000488753 TBX20Q9UMR3 447 aa14.26□□□□□ -0.13
ATPAF2-207ENST00000488753 NUMBLQ9Y6R0 609 aa14.26□□□□□ -0.13
ATPAF2-207ENST00000488753 TTC26A0AVF1 554 aa14.25□□□□□ -0.13
ATPAF2-207ENST00000488753 ARHGEF37A1IGU5 675 aa14.25□□□□□ -0.13
ATPAF2-207ENST00000488753 PROB1E7EW31 1015 aa14.25□□□□□ -0.13
ATPAF2-207ENST00000488753 CCL16O15467 120 aa14.25□□□□□ -0.13
ATPAF2-207ENST00000488753 FAM13AO94988 1023 aa14.25□□□□□ -0.13
ATPAF2-207ENST00000488753 CXCL8P10145 99 aa14.25□□□□□ -0.13
ATPAF2-207ENST00000488753 ATF2P15336 505 aa14.25□□□□□ -0.13
ATPAF2-207ENST00000488753 PLCG1P19174 1290 aa14.25□□□□□ -0.13
ATPAF2-207ENST00000488753 CYP3A5P20815 502 aa14.25□□□□□ -0.13
ATPAF2-207ENST00000488753 LRPAP1P30533 357 aa14.25□□□□□ -0.13
ATPAF2-207ENST00000488753 MATR3P43243 847 aaKnown RBP eCLIP14.25□□□□□ -0.13
ATPAF2-207ENST00000488753 LIG4P49917 911 aa14.25□□□□□ -0.13
ATPAF2-207ENST00000488753 ROR1Q01973 937 aa14.25□□□□□ -0.13
ATPAF2-207ENST00000488753 CACNB1Q02641 598 aaPredicted RBP14.25□□□□□ -0.13
ATPAF2-207ENST00000488753 PABPC1LQ4VXU2 614 aaKnown RBP14.25□□□□□ -0.13
ATPAF2-207ENST00000488753 TPGS2Q68CL5 300 aa14.25□□□□□ -0.13
ATPAF2-207ENST00000488753 MYCT1Q8N699 235 aa14.25□□□□□ -0.13
ATPAF2-207ENST00000488753 APPL2Q8NEU8 664 aa14.25□□□□□ -0.13
ATPAF2-207ENST00000488753 RASSF8Q8NHQ8 419 aa14.25□□□□□ -0.13
ATPAF2-207ENST00000488753 ATOH1Q92858 354 aaPredicted RBP14.25□□□□□ -0.13
ATPAF2-207ENST00000488753 C18orf25Q96B23 403 aaPredicted RBP14.25□□□□□ -0.13
ATPAF2-207ENST00000488753 PHOX2BQ99453 314 aa14.25□□□□□ -0.13
ATPAF2-207ENST00000488753 POLIQ9UNA4 740 aa14.25□□□□□ -0.13
ATPAF2-207ENST00000488753 VWA8A3KMH1 1905 aa14.24□□□□□ -0.13
ATPAF2-207ENST00000488753 WDR27A2RRH5 827 aa14.24□□□□□ -0.13
ATPAF2-207ENST00000488753 VPS37CA5D8V6 355 aaPredicted RBP14.24□□□□□ -0.13
ATPAF2-207ENST00000488753 H0Y858 1186 aa14.24□□□□□ -0.13
ATPAF2-207ENST00000488753 K7ENM7 598 aa14.24□□□□□ -0.13
ATPAF2-207ENST00000488753 HNRNPDLO14979 420 aaKnown RBP14.24□□□□□ -0.13
ATPAF2-207ENST00000488753 XPOTO43592 962 aaKnown RBP14.24□□□□□ -0.13
ATPAF2-207ENST00000488753 TRAK2O60296 914 aa14.24□□□□□ -0.13
ATPAF2-207ENST00000488753 TBCAO75347 108 aaKnown RBP14.24□□□□□ -0.13
ATPAF2-207ENST00000488753 CFHP08603 1231 aa14.24□□□□□ -0.13
ATPAF2-207ENST00000488753 ELF1P32519 619 aa14.24□□□□□ -0.13
ATPAF2-207ENST00000488753 MCM4P33991 863 aa14.24□□□□□ -0.13
ATPAF2-207ENST00000488753 NTHL1P78549 312 aa14.24□□□□□ -0.13
ATPAF2-207ENST00000488753 GRIN1Q05586 938 aa14.24□□□□□ -0.13
ATPAF2-207ENST00000488753 MCM6Q14566 821 aa14.24□□□□□ -0.13
ATPAF2-207ENST00000488753 KARSQ15046 597 aaKnown RBP14.24□□□□□ -0.13
ATPAF2-207ENST00000488753 ZBTB6Q15916 424 aa14.24□□□□□ -0.13
ATPAF2-207ENST00000488753 CD302Q8IX05 232 aa14.24□□□□□ -0.13
ATPAF2-207ENST00000488753 TCEAL8Q8IYN2 117 aa14.24□□□□□ -0.13
ATPAF2-207ENST00000488753 LRRC15Q8TF66 581 aa14.24□□□□□ -0.13
ATPAF2-207ENST00000488753 OXCT2Q9BYC2 517 aaPredicted RBP14.24□□□□□ -0.13
ATPAF2-207ENST00000488753 HAPLN2Q9GZV7 340 aa14.24□□□□□ -0.13
ATPAF2-207ENST00000488753 DNMT3BQ9UBC3 853 aaKnown RBP14.24□□□□□ -0.13
ATPAF2-207ENST00000488753 UBQLN1Q9UMX0 589 aaKnown RBP14.24□□□□□ -0.13
ATPAF2-207ENST00000488753 PCDHB8Q9UN66 801 aa14.24□□□□□ -0.13
ATPAF2-207ENST00000488753 USP34Q70CQ2 3546 aa14.23□□□□□ -0.13
ATPAF2-207ENST00000488753 DOCK8Q8NF50 2099 aa14.23□□□□□ -0.13
ATPAF2-207ENST00000488753 A0A0B4J269 797 aa14.23□□□□□ -0.13
ATPAF2-207ENST00000488753 KRBA1A5PL33 1030 aa14.23□□□□□ -0.13
ATPAF2-207ENST00000488753 M0QZQ0 153 aa14.23□□□□□ -0.13
ATPAF2-207ENST00000488753 OGTO15294 1046 aa14.23□□□□□ -0.13
ATPAF2-207ENST00000488753 FAM189A1O60320 539 aa14.23□□□□□ -0.13
ATPAF2-207ENST00000488753 KRT18P05783 430 aaKnown RBP14.23□□□□□ -0.13
ATPAF2-207ENST00000488753 ADRB2P07550 413 aa14.23□□□□□ -0.13
ATPAF2-207ENST00000488753 PAX3P23760 479 aa14.23□□□□□ -0.13
ATPAF2-207ENST00000488753 DDIT3P35638 169 aa14.23□□□□□ -0.13
ATPAF2-207ENST00000488753 AARSP49588 968 aaKnown RBP eCLIP14.23□□□□□ -0.13
ATPAF2-207ENST00000488753 GTF2BQ00403 316 aa14.23□□□□□ -0.13
ATPAF2-207ENST00000488753 PPP2R3AQ06190 1150 aa14.23□□□□□ -0.13
ATPAF2-207ENST00000488753 DHX8Q14562 1220 aaKnown RBP14.23□□□□□ -0.13
ATPAF2-207ENST00000488753 PTPAQ15257 358 aa14.23□□□□□ -0.13
ATPAF2-207ENST00000488753 CTXN3Q4LDR2 81 aa14.23□□□□□ -0.13
ATPAF2-207ENST00000488753 SEZ6Q53EL9 994 aa14.23□□□□□ -0.13
ATPAF2-207ENST00000488753 ZNF280DQ6N043 979 aa14.23□□□□□ -0.13
ATPAF2-207ENST00000488753 PHLDB3Q6NSJ2 640 aa14.23□□□□□ -0.13
ATPAF2-207ENST00000488753 MAP4K3Q8IVH8 894 aa14.23□□□□□ -0.13
ATPAF2-207ENST00000488753 CCDC105Q8IYK2 499 aa14.23□□□□□ -0.13
ATPAF2-207ENST00000488753 ITFG1Q8TB96 612 aa14.23□□□□□ -0.13
ATPAF2-207ENST00000488753 GPR152Q8TDT2 470 aa14.23□□□□□ -0.13
ATPAF2-207ENST00000488753 LARP4BQ92615 738 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms