RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 ZNF263O14978 683 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 KRT36O76013 467 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 CDH2P19022 906 aaPredicted RBP6.73□□□□□ -1.33
SIK3-212ENST00000488337 IL32P24001 234 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 CTNNA1P35221 906 aaKnown RBP6.73□□□□□ -1.33
SIK3-212ENST00000488337 RFX5P48382 616 aaPredicted RBP6.73□□□□□ -1.33
SIK3-212ENST00000488337 EIF2B2P49770 351 aaKnown RBP6.73□□□□□ -1.33
SIK3-212ENST00000488337 P2RX3P56373 397 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 PPP2R2BQ00005 443 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 PDIA6Q15084 440 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 ZNF827Q17R98 1081 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 DSTYKQ6XUX3 929 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 ZNF410Q86VK4 478 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 VGLL2Q8N8G2 317 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 SLAIN1Q8ND83 568 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 PGBD4Q96DM1 585 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 TMEM109Q9BVC6 243 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 MYLK2Q9H1R3 596 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 FYNP06241 537 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 ZBTB48P10074 688 aaPredicted RBP6.72□□□□□ -1.33
SIK3-212ENST00000488337 PPARGP37231 505 aaPredicted RBP6.72□□□□□ -1.33
SIK3-212ENST00000488337 TNNI2P48788 182 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 STX17P56962 302 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 CDC16Q13042 620 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 IFIT5Q13325 482 aaKnown RBP6.72□□□□□ -1.33
SIK3-212ENST00000488337 PTPAQ15257 358 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 NPTX1Q15818 432 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 METTL24Q5JXM2 366 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 CAND1Q86VP6 1230 aaKnown RBP6.72□□□□□ -1.33
SIK3-212ENST00000488337 PDSS2Q86YH6 399 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 CARNMT1Q8N4J0 409 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 GLMNQ92990 594 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 CNNM1Q9NRU3 951 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 SIRT5Q9NXA8 310 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 STK17AQ9UEE5 414 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 PCDHA12Q9UN75 941 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 GRID2IPA4D2P6 1211 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 B4E1Z4 1266 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 K7EPI3 171 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 DDX3XO00571 662 aaKnown RBP eCLIP6.72□□□□□ -1.33
SIK3-212ENST00000488337 KRT86O43790 486 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 CHEK2O96017 543 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 CDC25AP30304 524 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 AFMP43652 599 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 CBX5P45973 191 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 VCPP55072 806 aaKnown RBP6.72□□□□□ -1.33
SIK3-212ENST00000488337 DSG1Q02413 1049 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 NCAPD2Q15021 1401 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 NFRKBQ6P4R8 1299 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 KIAA1958Q8N8K9 716 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.72□□□□□ -1.33
SIK3-212ENST00000488337 DYDC2Q96IM9 177 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 CRAMP1Q96RY5 1269 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 KIAA1683Q9H0B3 1180 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 NAPBQ9H115 298 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 CDH19Q9H159 772 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 C17orf75Q9HAS0 396 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 ABI2Q9NYB9 513 aaPredicted RBP6.72□□□□□ -1.33
SIK3-212ENST00000488337 KCNN3Q9UGI6 736 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 SLC45A1Q9Y2W3 748 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 HYOU1Q9Y4L1 999 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 TRIM64BA6NI03 449 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 CAPN9O14815 690 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 UFL1O94874 794 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 PRKCAP17252 672 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 PON1P27169 355 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 HAAOP46952 286 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 EIF3BP55884 814 aaKnown RBP6.72□□□□□ -1.33
SIK3-212ENST00000488337 AMPD3Q01432 767 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 STK11Q15831 433 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 NADK2Q4G0N4 442 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 RILPL1Q5EBL4 403 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 TRAPPC3LQ5T215 181 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 SPATA1Q5VX52 437 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 SHEQ5VZ18 495 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 ZNF600Q6ZNG1 722 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 CYB5R4Q7L1T6 521 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 ADGRG6Q86SQ4 1221 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 GALNT13Q8IUC8 556 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 RAVER1Q8IY67 606 aaKnown RBP6.72□□□□□ -1.33
SIK3-212ENST00000488337 CENPSQ8N2Z9 138 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 C12orf50Q8NA57 414 aaPredicted RBP6.72□□□□□ -1.33
SIK3-212ENST00000488337 PHF12Q96QT6 1004 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 SPOCK3Q9BQ16 436 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 OSBPL6Q9BZF3 934 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 EBF3Q9H4W6 596 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 ARMC7Q9H6L4 198 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 SH2D4AQ9H788 454 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 ATPIF1Q9UII2 106 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 MOSPD1Q9UJG1 213 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 CHKBQ9Y259 395 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 PEAK1Q9H792 1746 aa6.72□□□□□ -1.33
SIK3-212ENST00000488337 CCDC169A6NNP5 214 aa6.71□□□□□ -1.33
SIK3-212ENST00000488337 CDH3P22223 829 aa6.71□□□□□ -1.33
SIK3-212ENST00000488337 MARK3P27448 753 aa6.71□□□□□ -1.33
SIK3-212ENST00000488337 CSTF2P33240 577 aaKnown RBP eCLIP6.71□□□□□ -1.333e-6■■■□□ 17.6
SIK3-212ENST00000488337 LONP1P36776 959 aaKnown RBP6.71□□□□□ -1.33
SIK3-212ENST00000488337 ENTPD1P49961 510 aa6.71□□□□□ -1.33
SIK3-212ENST00000488337 FAM98CQ17RN3 349 aaKnown RBP6.71□□□□□ -1.33
SIK3-212ENST00000488337 NANOGP8Q6NSW7 305 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms