RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 FSHRP23945 695 aa12.34□□□□□ -0.43
NIPAL3-207ENST00000488155 NMT1P30419 496 aaKnown RBP12.34□□□□□ -0.43
NIPAL3-207ENST00000488155 MCM4P33991 863 aa12.34□□□□□ -0.43
NIPAL3-207ENST00000488155 LONP1P36776 959 aaKnown RBP12.34□□□□□ -0.43
NIPAL3-207ENST00000488155 LIG4P49917 911 aa12.34□□□□□ -0.43
NIPAL3-207ENST00000488155 MRE11P49959 708 aa12.34□□□□□ -0.43
NIPAL3-207ENST00000488155 GUCY2FP51841 1108 aa12.34□□□□□ -0.43
NIPAL3-207ENST00000488155 NCKAP1LP55160 1127 aa12.34□□□□□ -0.43
NIPAL3-207ENST00000488155 RAB33AQ14088 237 aa12.34□□□□□ -0.43
NIPAL3-207ENST00000488155 VARS2Q5ST30 1063 aaKnown RBP12.34□□□□□ -0.43
NIPAL3-207ENST00000488155 ZBTB41Q5SVQ8 909 aa12.34□□□□□ -0.43
NIPAL3-207ENST00000488155 PDXDC1Q6P996 788 aa12.34□□□□□ -0.43
NIPAL3-207ENST00000488155 CYP26C1Q6V0L0 522 aa12.34□□□□□ -0.43
NIPAL3-207ENST00000488155 TMEM105Q8N8V8 129 aa12.34□□□□□ -0.43
NIPAL3-207ENST00000488155 FAM212AQ96EL1 285 aa12.34□□□□□ -0.43
NIPAL3-207ENST00000488155 CLIC6Q96NY7 704 aa12.34□□□□□ -0.43
NIPAL3-207ENST00000488155 BACH2Q9BYV9 841 aa12.34□□□□□ -0.43
NIPAL3-207ENST00000488155 HCFC1R1Q9NWW0 138 aa12.34□□□□□ -0.43
NIPAL3-207ENST00000488155 CNTN3Q9P232 1028 aa12.34□□□□□ -0.43
NIPAL3-207ENST00000488155 IGSF9Q9P2J2 1179 aa12.34□□□□□ -0.43
NIPAL3-207ENST00000488155 DUSP12Q9UNI6 340 aa12.34□□□□□ -0.43
NIPAL3-207ENST00000488155 F5P12259 2224 aa12.33□□□□□ -0.44
NIPAL3-207ENST00000488155 H0Y858 1186 aa12.33□□□□□ -0.44
NIPAL3-207ENST00000488155 TULP1O00294 542 aaPredicted RBP12.33□□□□□ -0.44
NIPAL3-207ENST00000488155 STK25O00506 426 aa12.33□□□□□ -0.44
NIPAL3-207ENST00000488155 HNRNPDLO14979 420 aaKnown RBP12.33□□□□□ -0.44
NIPAL3-207ENST00000488155 TRAK2O60296 914 aa12.33□□□□□ -0.44
NIPAL3-207ENST00000488155 TBCAO75347 108 aaKnown RBP12.33□□□□□ -0.44
NIPAL3-207ENST00000488155 C1RP00736 705 aa12.33□□□□□ -0.44
NIPAL3-207ENST00000488155 LAMP2P13473 410 aa12.33□□□□□ -0.44
NIPAL3-207ENST00000488155 PDCP20941 246 aa12.33□□□□□ -0.44
NIPAL3-207ENST00000488155 PTPN5P54829 565 aa12.33□□□□□ -0.44
NIPAL3-207ENST00000488155 MCL1Q07820 350 aa12.33□□□□□ -0.44
NIPAL3-207ENST00000488155 RESTQ13127 1097 aa12.33□□□□□ -0.44
NIPAL3-207ENST00000488155 PTPAQ15257 358 aa12.33□□□□□ -0.44
NIPAL3-207ENST00000488155 ZPBP2Q6X784 338 aa12.33□□□□□ -0.44
NIPAL3-207ENST00000488155 ANKS3Q6ZW76 656 aa12.33□□□□□ -0.44
NIPAL3-207ENST00000488155 DYMQ7RTS9 669 aa12.33□□□□□ -0.44
NIPAL3-207ENST00000488155 SLC44A3Q8N4M1 653 aa12.33□□□□□ -0.44
NIPAL3-207ENST00000488155 KCTD17Q8N5Z5 321 aa12.33□□□□□ -0.44
NIPAL3-207ENST00000488155 ITFG1Q8TB96 612 aa12.33□□□□□ -0.44
NIPAL3-207ENST00000488155 LARP4BQ92615 738 aaKnown RBP12.33□□□□□ -0.44
NIPAL3-207ENST00000488155 KIF12Q96FN5 646 aa12.33□□□□□ -0.44
NIPAL3-207ENST00000488155 RPP25Q9BUL9 199 aaKnown RBP12.33□□□□□ -0.44
NIPAL3-207ENST00000488155 RHOBTB2Q9BYZ6 727 aa12.33□□□□□ -0.44
NIPAL3-207ENST00000488155 PANK2Q9BZ23 570 aa12.33□□□□□ -0.44
NIPAL3-207ENST00000488155 PARVGQ9HBI0 331 aa12.33□□□□□ -0.44
NIPAL3-207ENST00000488155 EPS15L1Q9UBC2 864 aa12.33□□□□□ -0.44
NIPAL3-207ENST00000488155 ODF2LQ9ULJ1 636 aa12.33□□□□□ -0.44
NIPAL3-207ENST00000488155 CA14Q9ULX7 337 aa12.33□□□□□ -0.44
NIPAL3-207ENST00000488155 TBX20Q9UMR3 447 aa12.33□□□□□ -0.44
NIPAL3-207ENST00000488155 DENND4CQ5VZ89 1909 aa12.33□□□□□ -0.44
NIPAL3-207ENST00000488155 RIF1Q5UIP0 2472 aaKnown RBP12.32□□□□□ -0.44
NIPAL3-207ENST00000488155 KIF26AQ9ULI4 1882 aaPredicted RBP12.32□□□□□ -0.44
NIPAL3-207ENST00000488155 FAM186AA6NE01 2351 aa12.32□□□□□ -0.44
NIPAL3-207ENST00000488155 WDR27A2RRH5 827 aa12.32□□□□□ -0.44
NIPAL3-207ENST00000488155 LACTBL1A8MY62 500 aa12.32□□□□□ -0.44
NIPAL3-207ENST00000488155 TISP43B9A030 160 aa12.32□□□□□ -0.44
NIPAL3-207ENST00000488155 H0YCG3 227 aa12.32□□□□□ -0.44
NIPAL3-207ENST00000488155 SLC26A4O43511 780 aa12.32□□□□□ -0.44
NIPAL3-207ENST00000488155 XYLBO75191 536 aa12.32□□□□□ -0.44
NIPAL3-207ENST00000488155 HNRNPA1P09651 372 aaKnown RBP eCLIP12.32□□□□□ -0.44
NIPAL3-207ENST00000488155 RPL9P32969 192 aaKnown RBP12.32□□□□□ -0.44
NIPAL3-207ENST00000488155 ROR1Q01973 937 aa12.32□□□□□ -0.44
NIPAL3-207ENST00000488155 ZC2HC1CQ53FD0 456 aaPredicted RBP12.32□□□□□ -0.44
NIPAL3-207ENST00000488155 SIX5Q8N196 739 aa12.32□□□□□ -0.44
NIPAL3-207ENST00000488155 ING5Q8WYH8 240 aa12.32□□□□□ -0.44
NIPAL3-207ENST00000488155 ATOH1Q92858 354 aaPredicted RBP12.32□□□□□ -0.44
NIPAL3-207ENST00000488155 CCSER1Q9C0I3 900 aa12.32□□□□□ -0.44
NIPAL3-207ENST00000488155 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.32□□□□□ -0.44
NIPAL3-207ENST00000488155 DNMT3BQ9UBC3 853 aaKnown RBP12.32□□□□□ -0.44
NIPAL3-207ENST00000488155 TIMM13Q9Y5L4 95 aaPredicted RBP12.32□□□□□ -0.44
NIPAL3-207ENST00000488155 BACE2Q9Y5Z0 518 aa12.32□□□□□ -0.44
NIPAL3-207ENST00000488155 NUMBLQ9Y6R0 609 aa12.32□□□□□ -0.44
NIPAL3-207ENST00000488155 COL4A3Q01955 1670 aa12.32□□□□□ -0.44
NIPAL3-207ENST00000488155 TTC26A0AVF1 554 aa12.31□□□□□ -0.44
NIPAL3-207ENST00000488155 ANKRD63C9JTQ0 380 aa12.31□□□□□ -0.44
NIPAL3-207ENST00000488155 PRRG1O14668 218 aa12.31□□□□□ -0.44
NIPAL3-207ENST00000488155 PI15O43692 258 aa12.31□□□□□ -0.44
NIPAL3-207ENST00000488155 PAPLNO95428 1278 aa12.31□□□□□ -0.44
NIPAL3-207ENST00000488155 CLTAP09496 248 aa12.31□□□□□ -0.44
NIPAL3-207ENST00000488155 NPR3P17342 541 aa12.31□□□□□ -0.44
NIPAL3-207ENST00000488155 RFX1P22670 979 aa12.31□□□□□ -0.44
NIPAL3-207ENST00000488155 ELF1P32519 619 aa12.31□□□□□ -0.44
NIPAL3-207ENST00000488155 DDIT3P35638 169 aa12.31□□□□□ -0.44
NIPAL3-207ENST00000488155 ZNF131P52739 623 aa12.31□□□□□ -0.44
NIPAL3-207ENST00000488155 PPP2R3AQ06190 1150 aa12.31□□□□□ -0.44
NIPAL3-207ENST00000488155 CTXN3Q4LDR2 81 aa12.31□□□□□ -0.44
NIPAL3-207ENST00000488155 FOXD4L5Q5VV16 416 aaPredicted RBP12.31□□□□□ -0.44
NIPAL3-207ENST00000488155 CWF19L1Q69YN2 538 aaKnown RBP12.31□□□□□ -0.44
NIPAL3-207ENST00000488155 ASTLQ6HA08 431 aaPredicted RBP12.31□□□□□ -0.44
NIPAL3-207ENST00000488155 SLC39A4Q6P5W5 647 aa12.31□□□□□ -0.44
NIPAL3-207ENST00000488155 PARM1Q6UWI2 310 aa12.31□□□□□ -0.44
NIPAL3-207ENST00000488155 FOXD4L4Q8WXT5 416 aaPredicted RBP12.31□□□□□ -0.44
NIPAL3-207ENST00000488155 DDX12PQ92771 950 aa12.31□□□□□ -0.44
NIPAL3-207ENST00000488155 USP28Q96RU2 1077 aa12.31□□□□□ -0.44
NIPAL3-207ENST00000488155 PRRX2Q99811 253 aa12.31□□□□□ -0.44
NIPAL3-207ENST00000488155 MSTO1Q9BUK6 570 aa12.31□□□□□ -0.44
NIPAL3-207ENST00000488155 IKZF4Q9H2S9 585 aa12.31□□□□□ -0.44
NIPAL3-207ENST00000488155 RPF1Q9H9Y2 349 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 247.4 ms