RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 TISP43B9A030 160 aa22.25■■□□□ 1.15
HDAC4-209ENST00000487617 RFPL2O75678 378 aa22.25■■□□□ 1.15
HDAC4-209ENST00000487617 PPP1R37O75864 691 aa22.25■■□□□ 1.15
HDAC4-209ENST00000487617 GCNT3O95395 438 aa22.25■■□□□ 1.15
HDAC4-209ENST00000487617 E2F4Q16254 413 aa22.25■■□□□ 1.15
HDAC4-209ENST00000487617 AXDND1Q5T1B0 1012 aaPredicted RBP22.25■■□□□ 1.15
HDAC4-209ENST00000487617 SLFN12LQ6IEE8 588 aa22.25■■□□□ 1.15
HDAC4-209ENST00000487617 FAM212AQ96EL1 285 aa22.25■■□□□ 1.15
HDAC4-209ENST00000487617 LRRC27Q9C0I9 530 aa22.25■■□□□ 1.15
HDAC4-209ENST00000487617 TNMDQ9H2S6 317 aa22.25■■□□□ 1.15
HDAC4-209ENST00000487617 CUEDC2Q9H467 287 aa22.25■■□□□ 1.15
HDAC4-209ENST00000487617 EXOC7Q9UPT5 735 aa22.25■■□□□ 1.15
HDAC4-209ENST00000487617 FRMD3A2A2Y4 597 aa22.24■■□□□ 1.15
HDAC4-209ENST00000487617 ADAM12O43184 909 aa22.24■■□□□ 1.15
HDAC4-209ENST00000487617 ADALQ6DHV7 355 aa22.24■■□□□ 1.15
HDAC4-209ENST00000487617 CCDC149Q6ZUS6 474 aa22.24■■□□□ 1.15
HDAC4-209ENST00000487617 ANKS3Q6ZW76 656 aa22.24■■□□□ 1.15
HDAC4-209ENST00000487617 CCDC65Q8IXS2 484 aa22.24■■□□□ 1.15
HDAC4-209ENST00000487617 IQUBQ8NA54 791 aa22.24■■□□□ 1.15
HDAC4-209ENST00000487617 ACCSQ96QU6 501 aa22.24■■□□□ 1.15
HDAC4-209ENST00000487617 STRA6Q9BX79 667 aa22.24■■□□□ 1.15
HDAC4-209ENST00000487617 IKZF4Q9H2S9 585 aa22.24■■□□□ 1.15
HDAC4-209ENST00000487617 OLFML3Q9NRN5 406 aa22.24■■□□□ 1.15
HDAC4-209ENST00000487617 MTRRQ9UBK8 725 aa22.24■■□□□ 1.15
HDAC4-209ENST00000487617 CPSF3Q9UKF6 684 aaKnown RBP22.24■■□□□ 1.15
HDAC4-209ENST00000487617 UBQLN1Q9UMX0 589 aaKnown RBP22.24■■□□□ 1.15
HDAC4-209ENST00000487617 PCDHA7Q9UN72 937 aa22.24■■□□□ 1.15
HDAC4-209ENST00000487617 PCDHB13Q9Y5F0 798 aa22.24■■□□□ 1.15
HDAC4-209ENST00000487617 C5orf42Q9H799 3197 aa22.24■■□□□ 1.15
HDAC4-209ENST00000487617 MYH15Q9Y2K3 1946 aa22.23■■□□□ 1.15
HDAC4-209ENST00000487617 TRIP11Q15643 1979 aa22.23■■□□□ 1.15
HDAC4-209ENST00000487617 ACOT2P49753 483 aa22.23■■□□□ 1.15
HDAC4-209ENST00000487617 AMPD3Q01432 767 aa22.23■■□□□ 1.15
HDAC4-209ENST00000487617 KCNA1Q09470 495 aa22.23■■□□□ 1.15
HDAC4-209ENST00000487617 ZBTB6Q15916 424 aa22.23■■□□□ 1.15
HDAC4-209ENST00000487617 L1TD1Q5T7N2 865 aaKnown RBP22.23■■□□□ 1.15
HDAC4-209ENST00000487617 CYP26C1Q6V0L0 522 aa22.23■■□□□ 1.15
HDAC4-209ENST00000487617 TDRD5Q8NAT2 981 aaKnown RBP22.23■■□□□ 1.15
HDAC4-209ENST00000487617 SMG7Q92540 1137 aaKnown RBP22.23■■□□□ 1.15
HDAC4-209ENST00000487617 KBTBD4Q9NVX7 518 aa22.23■■□□□ 1.15
HDAC4-209ENST00000487617 ZDHHC7Q9NXF8 308 aa22.23■■□□□ 1.15
HDAC4-209ENST00000487617 FAM13BQ9NYF5 915 aa22.23■■□□□ 1.15
HDAC4-209ENST00000487617 FBXW11Q9UKB1 542 aa22.23■■□□□ 1.15
HDAC4-209ENST00000487617 AGO2Q9UKV8 859 aaKnown RBP22.23■■□□□ 1.15
HDAC4-209ENST00000487617 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.23■■□□□ 1.15
HDAC4-209ENST00000487617 BACE2Q9Y5Z0 518 aa22.23■■□□□ 1.15
HDAC4-209ENST00000487617 STYXL1Q9Y6J8 313 aa22.23■■□□□ 1.15
HDAC4-209ENST00000487617 SYN3O14994 580 aa22.22■■□□□ 1.15
HDAC4-209ENST00000487617 XPOTO43592 962 aaKnown RBP22.22■■□□□ 1.15
HDAC4-209ENST00000487617 ADRB2P07550 413 aa22.22■■□□□ 1.15
HDAC4-209ENST00000487617 CYP3A5P20815 502 aa22.22■■□□□ 1.15
HDAC4-209ENST00000487617 COL9A1P20849 921 aa22.22■■□□□ 1.15
HDAC4-209ENST00000487617 MCM4P33991 863 aa22.22■■□□□ 1.15
HDAC4-209ENST00000487617 OR1D2P34982 312 aa22.22■■□□□ 1.15
HDAC4-209ENST00000487617 CASP5P51878 434 aa22.22■■□□□ 1.15
HDAC4-209ENST00000487617 ALCAMQ13740 583 aa22.22■■□□□ 1.15
HDAC4-209ENST00000487617 RAB33AQ14088 237 aa22.22■■□□□ 1.15
HDAC4-209ENST00000487617 POSTNQ15063 836 aa22.22■■□□□ 1.15
HDAC4-209ENST00000487617 LIN9Q5TKA1 542 aa22.22■■□□□ 1.15
HDAC4-209ENST00000487617 CD302Q8IX05 232 aa22.22■■□□□ 1.15
HDAC4-209ENST00000487617 TMEM130Q8N3G9 435 aa22.22■■□□□ 1.15
HDAC4-209ENST00000487617 POMGNT1Q8WZA1 660 aa22.22■■□□□ 1.15
HDAC4-209ENST00000487617 EDAQ92838 391 aa22.22■■□□□ 1.15
HDAC4-209ENST00000487617 TSPAN18Q96SJ8 248 aa22.22■■□□□ 1.15
HDAC4-209ENST00000487617 RHOBTB2Q9BYZ6 727 aa22.22■■□□□ 1.15
HDAC4-209ENST00000487617 PIDD1Q9HB75 910 aa22.22■■□□□ 1.15
HDAC4-209ENST00000487617 RCOR1Q9UKL0 485 aa22.22■■□□□ 1.15
HDAC4-209ENST00000487617 USTQ9Y2C2 406 aa22.22■■□□□ 1.15
HDAC4-209ENST00000487617 CDY1Q9Y6F8 540 aa22.22■■□□□ 1.15
HDAC4-209ENST00000487617 CITO14578 2027 aa22.22■■□□□ 1.15
HDAC4-209ENST00000487617 PLXNA3P51805 1871 aa22.22■■□□□ 1.15
HDAC4-209ENST00000487617 POLR2DO15514 142 aaKnown RBP22.21■■□□□ 1.15
HDAC4-209ENST00000487617 ZMYND10O75800 440 aa22.21■■□□□ 1.15
HDAC4-209ENST00000487617 LRPAP1P30533 357 aa22.21■■□□□ 1.15
HDAC4-209ENST00000487617 VARS2Q5ST30 1063 aaKnown RBP22.21■■□□□ 1.15
HDAC4-209ENST00000487617 JADE1Q6IE81 842 aa22.21■■□□□ 1.15
HDAC4-209ENST00000487617 RSPO2Q6UXX9 243 aaPredicted RBP22.21■■□□□ 1.15
HDAC4-209ENST00000487617 SYCP3Q8IZU3 236 aa22.21■■□□□ 1.15
HDAC4-209ENST00000487617 ZNF707Q96C28 371 aaPredicted RBP22.21■■□□□ 1.15
HDAC4-209ENST00000487617 SUSD3Q96L08 255 aa22.21■■□□□ 1.15
HDAC4-209ENST00000487617 FGFBP2Q9BYJ0 223 aa22.21■■□□□ 1.15
HDAC4-209ENST00000487617 TRIM9Q9C026 710 aa22.21■■□□□ 1.15
HDAC4-209ENST00000487617 PRR33A8MZF0 331 aa22.2■■□□□ 1.14
HDAC4-209ENST00000487617 ADSSP30520 456 aa22.2■■□□□ 1.14
HDAC4-209ENST00000487617 GUCY2FP51841 1108 aa22.2■■□□□ 1.14
HDAC4-209ENST00000487617 ASIC1P78348 528 aa22.2■■□□□ 1.14
HDAC4-209ENST00000487617 ZXDAP98168 799 aa22.2■■□□□ 1.14
HDAC4-209ENST00000487617 PTPN21Q16825 1174 aa22.2■■□□□ 1.14
HDAC4-209ENST00000487617 RESP18Q5W5W9 173 aa22.2■■□□□ 1.14
HDAC4-209ENST00000487617 OTOP3Q7RTS5 596 aa22.2■■□□□ 1.14
HDAC4-209ENST00000487617 ZDHHC14Q8IZN3 488 aa22.2■■□□□ 1.14
HDAC4-209ENST00000487617 PLCD3Q8N3E9 789 aa22.2■■□□□ 1.14
HDAC4-209ENST00000487617 BEST2Q8NFU1 509 aa22.2■■□□□ 1.14
HDAC4-209ENST00000487617 ACSF2Q96CM8 615 aaPredicted RBP22.2■■□□□ 1.14
HDAC4-209ENST00000487617 PRKD2Q9BZL6 878 aa22.2■■□□□ 1.14
HDAC4-209ENST00000487617 WDR6Q9NNW5 1121 aaKnown RBP22.2■■□□□ 1.14
HDAC4-209ENST00000487617 ZDHHC9Q9Y397 364 aa22.2■■□□□ 1.14
HDAC4-209ENST00000487617 H7C4K7 107 aa22.19■■□□□ 1.14
HDAC4-209ENST00000487617 PRPF6O94906 941 aaKnown RBP22.19■■□□□ 1.14
HDAC4-209ENST00000487617 PAPLNO95428 1278 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms