RNA–Protein interactions for RNA: ENST00000487118.1

NUDCD3-209, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-209ENST00000487118 PTK2Q05397 1052 aa9.26□□□□□ -0.93
NUDCD3-209ENST00000487118 PTK7Q13308 1070 aa9.26□□□□□ -0.93
NUDCD3-209ENST00000487118 BIRC3Q13489 604 aa9.26□□□□□ -0.93
NUDCD3-209ENST00000487118 NCOA4Q13772 614 aa9.26□□□□□ -0.93
NUDCD3-209ENST00000487118 SPA17Q15506 151 aa9.26□□□□□ -0.93
NUDCD3-209ENST00000487118 SLC18A3Q16572 532 aa9.26□□□□□ -0.93
NUDCD3-209ENST00000487118 ARHGAP44Q17R89 818 aa9.26□□□□□ -0.93
NUDCD3-209ENST00000487118 TRIM71Q2Q1W2 868 aaKnown RBP9.26□□□□□ -0.93
NUDCD3-209ENST00000487118 SLC10A6Q3KNW5 377 aa9.26□□□□□ -0.93
NUDCD3-209ENST00000487118 FAM47CQ5HY64 1035 aa9.26□□□□□ -0.93
NUDCD3-209ENST00000487118 WDR44Q5JSH3 913 aa9.26□□□□□ -0.93
NUDCD3-209ENST00000487118 UBXN11Q5T124 520 aa9.26□□□□□ -0.93
NUDCD3-209ENST00000487118 TRAPPC11Q7Z392 1133 aa9.26□□□□□ -0.93
NUDCD3-209ENST00000487118 FAM228AQ86W67 206 aa9.26□□□□□ -0.93
NUDCD3-209ENST00000487118 NT5DC4Q86YG4 428 aa9.26□□□□□ -0.93
NUDCD3-209ENST00000487118 GPIHBP1Q8IV16 184 aa9.26□□□□□ -0.93
NUDCD3-209ENST00000487118 FAM71AQ8IYT1 594 aa9.26□□□□□ -0.93
NUDCD3-209ENST00000487118 PPM1KQ8N3J5 372 aa9.26□□□□□ -0.93
NUDCD3-209ENST00000487118 ARRDC4Q8NCT1 418 aa9.26□□□□□ -0.93
NUDCD3-209ENST00000487118 ATRIPQ8WXE1 791 aa9.26□□□□□ -0.93
NUDCD3-209ENST00000487118 ANKRD36BP1Q96IX9 119 aa9.26□□□□□ -0.93
NUDCD3-209ENST00000487118 ACAP3Q96P50 834 aa9.26□□□□□ -0.93
NUDCD3-209ENST00000487118 PI4K2AQ9BTU6 479 aa9.26□□□□□ -0.93
NUDCD3-209ENST00000487118 CCDC94Q9BW85 323 aaPredicted RBP9.26□□□□□ -0.93
NUDCD3-209ENST00000487118 MTMR12Q9C0I1 747 aa9.26□□□□□ -0.93
NUDCD3-209ENST00000487118 SENP6Q9GZR1 1112 aaPredicted RBP9.26□□□□□ -0.93
NUDCD3-209ENST00000487118 PLEKHA5Q9HAU0 1116 aa9.26□□□□□ -0.93
NUDCD3-209ENST00000487118 APOBEC3GQ9HC16 384 aaKnown RBP9.26□□□□□ -0.93
NUDCD3-209ENST00000487118 C1orf112Q9NSG2 853 aa9.26□□□□□ -0.93
NUDCD3-209ENST00000487118 PHF24Q9UPV7 400 aa9.26□□□□□ -0.93
NUDCD3-209ENST00000487118 GINS2Q9Y248 185 aa9.26□□□□□ -0.93
NUDCD3-209ENST00000487118 PCDHA13Q9Y5I0 950 aa9.26□□□□□ -0.93
NUDCD3-209ENST00000487118 NR2E3Q9Y5X4 410 aa9.26□□□□□ -0.93
NUDCD3-209ENST00000487118 LAMA3Q16787 3333 aa9.26□□□□□ -0.93
NUDCD3-209ENST00000487118 A0A087X0T9 212 aa9.25□□□□□ -0.93
NUDCD3-209ENST00000487118 A0A1W2PPC1 479 aa9.25□□□□□ -0.93
NUDCD3-209ENST00000487118 RCCD1A6NED2 376 aa9.25□□□□□ -0.93
NUDCD3-209ENST00000487118 CAND2O75155 1236 aa9.25□□□□□ -0.93
NUDCD3-209ENST00000487118 PHACTR2O75167 634 aa9.25□□□□□ -0.93
NUDCD3-209ENST00000487118 CST3P01034 146 aaPredicted RBP9.25□□□□□ -0.93
NUDCD3-209ENST00000487118 TNNC2P02585 160 aa9.25□□□□□ -0.93
NUDCD3-209ENST00000487118 CHRNA1P02708 482 aa9.25□□□□□ -0.93
NUDCD3-209ENST00000487118 NFICP08651 508 aa9.25□□□□□ -0.93
NUDCD3-209ENST00000487118 TMEM191BP0C7N4 346 aa9.25□□□□□ -0.93
NUDCD3-209ENST00000487118 FAM228BP0C875 321 aa9.25□□□□□ -0.93
NUDCD3-209ENST00000487118 MAGEA1P43355 309 aa9.25□□□□□ -0.93
NUDCD3-209ENST00000487118 NOP14P78316 857 aaKnown RBP9.25□□□□□ -0.93
NUDCD3-209ENST00000487118 TFAMQ00059 246 aaKnown RBP9.25□□□□□ -0.93
NUDCD3-209ENST00000487118 CYP27A1Q02318 531 aa9.25□□□□□ -0.93
NUDCD3-209ENST00000487118 GFPT1Q06210 699 aaPredicted RBP9.25□□□□□ -0.93
NUDCD3-209ENST00000487118 BMS1Q14692 1282 aaKnown RBP9.25□□□□□ -0.93
NUDCD3-209ENST00000487118 PTGISQ16647 500 aa9.25□□□□□ -0.93
NUDCD3-209ENST00000487118 ARHGAP29Q52LW3 1261 aa9.25□□□□□ -0.93
NUDCD3-209ENST00000487118 FAM26DQ5JW98 314 aa9.25□□□□□ -0.93
NUDCD3-209ENST00000487118 DNTTIP2Q5QJE6 756 aaKnown RBP9.25□□□□□ -0.93
NUDCD3-209ENST00000487118 C10orf76Q5T2E6 689 aa9.25□□□□□ -0.93
NUDCD3-209ENST00000487118 JADE1Q6IE81 842 aa9.25□□□□□ -0.93
NUDCD3-209ENST00000487118 KIAA1328Q86T90 577 aa9.25□□□□□ -0.93
NUDCD3-209ENST00000487118 TXLNBQ8N3L3 684 aa9.25□□□□□ -0.93
NUDCD3-209ENST00000487118 UBR7Q8N806 425 aa9.25□□□□□ -0.93
NUDCD3-209ENST00000487118 SLC30A5Q8TAD4 765 aa9.25□□□□□ -0.93
NUDCD3-209ENST00000487118 CXorf38Q8TB03 319 aa9.25□□□□□ -0.93
NUDCD3-209ENST00000487118 DHX38Q92620 1227 aaKnown RBP9.25□□□□□ -0.93
NUDCD3-209ENST00000487118 TAF4BQ92750 862 aa9.25□□□□□ -0.93
NUDCD3-209ENST00000487118 FAM212AQ96EL1 285 aa9.25□□□□□ -0.93
NUDCD3-209ENST00000487118 FAXDC2Q96IV6 333 aa9.25□□□□□ -0.93
NUDCD3-209ENST00000487118 GLT1D1Q96MS3 346 aa9.25□□□□□ -0.93
NUDCD3-209ENST00000487118 EIF2AQ9BY44 585 aaKnown RBP9.25□□□□□ -0.93
NUDCD3-209ENST00000487118 SEZ6LQ9BYH1 1024 aa9.25□□□□□ -0.93
NUDCD3-209ENST00000487118 TSGA10Q9BZW7 698 aa9.25□□□□□ -0.93
NUDCD3-209ENST00000487118 PAK6Q9NQU5 681 aaPredicted RBP9.25□□□□□ -0.93
NUDCD3-209ENST00000487118 MYO1AQ9UBC5 1043 aa9.25□□□□□ -0.93
NUDCD3-209ENST00000487118 CNTN6Q9UQ52 1028 aa9.25□□□□□ -0.93
NUDCD3-209ENST00000487118 PIN4Q9Y237 131 aaKnown RBP9.25□□□□□ -0.93
NUDCD3-209ENST00000487118 DERAQ9Y315 318 aa9.25□□□□□ -0.93
NUDCD3-209ENST00000487118 NOC2LQ9Y3T9 749 aaKnown RBP9.25□□□□□ -0.93
NUDCD3-209ENST00000487118 C2CD2Q9Y426 696 aa9.25□□□□□ -0.93
NUDCD3-209ENST00000487118 A0A1W2PQ45 241 aaPredicted RBP9.24□□□□□ -0.93
NUDCD3-209ENST00000487118 A0A1W2PQY0 241 aa9.24□□□□□ -0.93
NUDCD3-209ENST00000487118 DDX3XO00571 662 aaKnown RBP eCLIP9.24□□□□□ -0.93
NUDCD3-209ENST00000487118 STAU1O95793 577 aaKnown RBP9.24□□□□□ -0.93
NUDCD3-209ENST00000487118 ABL1P00519 1130 aa9.24□□□□□ -0.93
NUDCD3-209ENST00000487118 MYCNP04198 464 aaPredicted RBP9.24□□□□□ -0.93
NUDCD3-209ENST00000487118 ACO1P21399 889 aaKnown RBP9.24□□□□□ -0.93
NUDCD3-209ENST00000487118 TBXAS1P24557 533 aaPredicted RBP9.24□□□□□ -0.93
NUDCD3-209ENST00000487118 MYL6P60660 151 aa9.24□□□□□ -0.93
NUDCD3-209ENST00000487118 CUL2Q13617 745 aa9.24□□□□□ -0.93
NUDCD3-209ENST00000487118 TMEM132DQ14C87 1099 aa9.24□□□□□ -0.93
NUDCD3-209ENST00000487118 NAB2Q15742 525 aa9.24□□□□□ -0.93
NUDCD3-209ENST00000487118 ZBTB6Q15916 424 aa9.24□□□□□ -0.93
NUDCD3-209ENST00000487118 SGSM1Q2NKQ1 1148 aa9.24□□□□□ -0.93
NUDCD3-209ENST00000487118 XKR4Q5GH76 650 aa9.24□□□□□ -0.93
NUDCD3-209ENST00000487118 SCARA3Q6AZY7 606 aa9.24□□□□□ -0.93
NUDCD3-209ENST00000487118 SPOPLQ6IQ16 392 aa9.24□□□□□ -0.93
NUDCD3-209ENST00000487118 ALKAL1Q6UXT8 129 aa9.24□□□□□ -0.93
NUDCD3-209ENST00000487118 VPS36Q86VN1 386 aa9.24□□□□□ -0.93
NUDCD3-209ENST00000487118 C1orf127Q8N9H9 656 aa9.24□□□□□ -0.93
NUDCD3-209ENST00000487118 LNX1Q8TBB1 728 aaPredicted RBP9.24□□□□□ -0.93
NUDCD3-209ENST00000487118 EPS8L1Q8TE68 723 aa9.24□□□□□ -0.93
NUDCD3-209ENST00000487118 TSPAN18Q96SJ8 248 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms