RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 CASP10Q92851 521 aa11.11□□□□□ -0.63
NEK4-204ENST00000487068 C18orf25Q96B23 403 aaPredicted RBP11.11□□□□□ -0.63
NEK4-204ENST00000487068 PAGE5Q96GU1 130 aa11.11□□□□□ -0.63
NEK4-204ENST00000487068 FAM213AQ9BRX8 229 aa11.11□□□□□ -0.63
NEK4-204ENST00000487068 APOL5Q9BWW9 433 aa11.11□□□□□ -0.63
NEK4-204ENST00000487068 VN1R3Q9BXE9 311 aa11.11□□□□□ -0.63
NEK4-204ENST00000487068 GOLPH3LQ9H4A5 285 aa11.11□□□□□ -0.63
NEK4-204ENST00000487068 SLC39A2Q9NP94 309 aa11.11□□□□□ -0.63
NEK4-204ENST00000487068 TUBGCP4Q9UGJ1 667 aa11.11□□□□□ -0.63
NEK4-204ENST00000487068 CD207Q9UJ71 328 aa11.11□□□□□ -0.63
NEK4-204ENST00000487068 HPSEQ9Y251 543 aa11.11□□□□□ -0.63
NEK4-204ENST00000487068 MUC6Q6W4X9 2439 aa11.11□□□□□ -0.63
NEK4-204ENST00000487068 UBE4BO95155 1302 aa11.1□□□□□ -0.63
NEK4-204ENST00000487068 DOCK6Q96HP0 2047 aa11.1□□□□□ -0.63
NEK4-204ENST00000487068 GOLGA8IPA6NC78 632 aa11.1□□□□□ -0.63
NEK4-204ENST00000487068 GOLGA8JA6NMD2 632 aa11.1□□□□□ -0.63
NEK4-204ENST00000487068 EIF3DO15371 548 aaKnown RBP eCLIP11.1□□□□□ -0.63
NEK4-204ENST00000487068 TRAPPC3O43617 180 aa11.1□□□□□ -0.63
NEK4-204ENST00000487068 GLP2RO95838 553 aa11.1□□□□□ -0.63
NEK4-204ENST00000487068 ADH1AP07327 375 aa11.1□□□□□ -0.63
NEK4-204ENST00000487068 KCNE1P15382 129 aa11.1□□□□□ -0.63
NEK4-204ENST00000487068 CREMQ03060 361 aa11.1□□□□□ -0.63
NEK4-204ENST00000487068 SOX4Q06945 474 aaPredicted RBP11.1□□□□□ -0.63
NEK4-204ENST00000487068 DLX2Q07687 328 aaPredicted RBP11.1□□□□□ -0.63
NEK4-204ENST00000487068 ADAM15Q13444 863 aa11.1□□□□□ -0.63
NEK4-204ENST00000487068 ENOX2Q16206 610 aaKnown RBP11.1□□□□□ -0.63
NEK4-204ENST00000487068 SLC10A6Q3KNW5 377 aa11.1□□□□□ -0.63
NEK4-204ENST00000487068 JADE1Q6IE81 842 aa11.1□□□□□ -0.63
NEK4-204ENST00000487068 ELMSAN1Q6PJG2 1045 aa11.1□□□□□ -0.63
NEK4-204ENST00000487068 PPFIBP1Q86W92 1011 aa11.1□□□□□ -0.63
NEK4-204ENST00000487068 BEST2Q8NFU1 509 aa11.1□□□□□ -0.63
NEK4-204ENST00000487068 KCNN1Q92952 543 aa11.1□□□□□ -0.63
NEK4-204ENST00000487068 DDX27Q96GQ7 796 aaKnown RBP11.1□□□□□ -0.63
NEK4-204ENST00000487068 ZMAT2Q96NC0 199 aaKnown RBP11.1□□□□□ -0.63
NEK4-204ENST00000487068 GPR62Q9BZJ7 368 aa11.1□□□□□ -0.63
NEK4-204ENST00000487068 PCIF1Q9H4Z3 704 aa11.1□□□□□ -0.63
NEK4-204ENST00000487068 PLEKHA5Q9HAU0 1116 aa11.1□□□□□ -0.63
NEK4-204ENST00000487068 CHMP5Q9NZZ3 219 aa11.1□□□□□ -0.63
NEK4-204ENST00000487068 UBQLN1Q9UMX0 589 aaKnown RBP11.1□□□□□ -0.63
NEK4-204ENST00000487068 HCFC2Q9Y5Z7 792 aa11.1□□□□□ -0.63
NEK4-204ENST00000487068 PVALEFA0A1B0GWK0 134 aa11.09□□□□□ -0.63
NEK4-204ENST00000487068 TTC26A0AVF1 554 aa11.09□□□□□ -0.63
NEK4-204ENST00000487068 LACTBL1A8MY62 500 aa11.09□□□□□ -0.63
NEK4-204ENST00000487068 I3L4J1 428 aa11.09□□□□□ -0.63
NEK4-204ENST00000487068 CLASP2O75122 1294 aaKnown RBP11.09□□□□□ -0.63
NEK4-204ENST00000487068 CLSTN1O94985 981 aa11.09□□□□□ -0.63
NEK4-204ENST00000487068 ZNF202O95125 648 aa11.09□□□□□ -0.63
NEK4-204ENST00000487068 LDHAP00338 332 aaKnown RBP11.09□□□□□ -0.63
NEK4-204ENST00000487068 MYL1P05976 194 aa11.09□□□□□ -0.63
NEK4-204ENST00000487068 GARTP22102 1010 aa11.09□□□□□ -0.63
NEK4-204ENST00000487068 BRCC3P46736 316 aa11.09□□□□□ -0.63
NEK4-204ENST00000487068 MRE11P49959 708 aa11.09□□□□□ -0.63
NEK4-204ENST00000487068 CYP2J2P51589 502 aa11.09□□□□□ -0.63
NEK4-204ENST00000487068 TMEM132DQ14C87 1099 aa11.09□□□□□ -0.63
NEK4-204ENST00000487068 NAB2Q15742 525 aa11.09□□□□□ -0.63
NEK4-204ENST00000487068 PSMD5Q16401 504 aa11.09□□□□□ -0.63
NEK4-204ENST00000487068 UPP1Q16831 310 aa11.09□□□□□ -0.63
NEK4-204ENST00000487068 CTC1Q2NKJ3 1217 aa11.09□□□□□ -0.63
NEK4-204ENST00000487068 PUS10Q3MIT2 529 aaKnown RBP11.09□□□□□ -0.63
NEK4-204ENST00000487068 CNNM4Q6P4Q7 775 aa11.09□□□□□ -0.63
NEK4-204ENST00000487068 ALKAL1Q6UXT8 129 aa11.09□□□□□ -0.63
NEK4-204ENST00000487068 KRBA2Q6ZNG9 492 aa11.09□□□□□ -0.63
NEK4-204ENST00000487068 HS2ST1Q7LGA3 356 aa11.09□□□□□ -0.63
NEK4-204ENST00000487068 TAS1R1Q7RTX1 841 aa11.09□□□□□ -0.63
NEK4-204ENST00000487068 CBWD1Q9BRT8 395 aa11.09□□□□□ -0.63
NEK4-204ENST00000487068 TTPALQ9BTX7 342 aa11.09□□□□□ -0.63
NEK4-204ENST00000487068 RBAKQ9NYW8 714 aaPredicted RBP11.09□□□□□ -0.63
NEK4-204ENST00000487068 CPSF3Q9UKF6 684 aaKnown RBP11.09□□□□□ -0.63
NEK4-204ENST00000487068 IRAK3Q9Y616 596 aa11.09□□□□□ -0.63
NEK4-204ENST00000487068 ZNF638Q14966 1978 aaKnown RBP11.08□□□□□ -0.64
NEK4-204ENST00000487068 GRXCR2A6NFK2 248 aa11.08□□□□□ -0.64
NEK4-204ENST00000487068 TMEM189-UBE2V1I3L0A0 370 aa11.08□□□□□ -0.64
NEK4-204ENST00000487068 DCXO43602 365 aa11.08□□□□□ -0.64
NEK4-204ENST00000487068 FAM189A1O60320 539 aa11.08□□□□□ -0.64
NEK4-204ENST00000487068 IL18RAPO95256 599 aa11.08□□□□□ -0.64
NEK4-204ENST00000487068 GLUD1P00367 558 aa11.08□□□□□ -0.64
NEK4-204ENST00000487068 RPN1P04843 607 aaKnown RBP11.08□□□□□ -0.64
NEK4-204ENST00000487068 NFICP08651 508 aa11.08□□□□□ -0.64
NEK4-204ENST00000487068 CNPP09543 421 aaKnown RBP11.08□□□□□ -0.64
NEK4-204ENST00000487068 EPCAMP16422 314 aa11.08□□□□□ -0.64
NEK4-204ENST00000487068 RPL17P18621 184 aaKnown RBP11.08□□□□□ -0.64
NEK4-204ENST00000487068 LTBRP36941 435 aa11.08□□□□□ -0.64
NEK4-204ENST00000487068 GUCY2FP51841 1108 aa11.08□□□□□ -0.64
NEK4-204ENST00000487068 DSG1Q02413 1049 aa11.08□□□□□ -0.64
NEK4-204ENST00000487068 SMAD4Q13485 552 aaKnown RBP11.08□□□□□ -0.64
NEK4-204ENST00000487068 KMT5BQ4FZB7 885 aa11.08□□□□□ -0.64
NEK4-204ENST00000487068 XKR4Q5GH76 650 aa11.08□□□□□ -0.64
NEK4-204ENST00000487068 RTP2Q5QGT7 225 aa11.08□□□□□ -0.64
NEK4-204ENST00000487068 CES5AQ6NT32 575 aa11.08□□□□□ -0.64
NEK4-204ENST00000487068 KANK3Q6NY19 840 aa11.08□□□□□ -0.64
NEK4-204ENST00000487068 PDXDC1Q6P996 788 aa11.08□□□□□ -0.64
NEK4-204ENST00000487068 DCLRE1AQ6PJP8 1040 aa11.08□□□□□ -0.64
NEK4-204ENST00000487068 PRSS55Q6UWB4 352 aaPredicted RBP11.08□□□□□ -0.64
NEK4-204ENST00000487068 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.08□□□□□ -0.64
NEK4-204ENST00000487068 CD302Q8IX05 232 aa11.08□□□□□ -0.64
NEK4-204ENST00000487068 GPD1LQ8N335 351 aa11.08□□□□□ -0.64
NEK4-204ENST00000487068 C3orf58Q8NDZ4 430 aa11.08□□□□□ -0.64
NEK4-204ENST00000487068 VN1R2Q8NFZ6 395 aa11.08□□□□□ -0.64
NEK4-204ENST00000487068 KCNV2Q8TDN2 545 aa11.08□□□□□ -0.64
NEK4-204ENST00000487068 KLHL5Q96PQ7 755 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms