RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 NXPE3Q969Y0 559 aa26.82■■□□□ 1.88
LIME1-206ENST00000487026 BICD1Q96G01 975 aa26.82■■□□□ 1.88
LIME1-206ENST00000487026 RPP25Q9BUL9 199 aaKnown RBP26.82■■□□□ 1.88
LIME1-206ENST00000487026 BLOC1S4Q9NUP1 217 aa26.82■■□□□ 1.88
LIME1-206ENST00000487026 LARSQ9P2J5 1176 aaKnown RBP26.82■■□□□ 1.88
LIME1-206ENST00000487026 NUB1Q9Y5A7 615 aa26.82■■□□□ 1.88
LIME1-206ENST00000487026 NUMBLQ9Y6R0 609 aa26.82■■□□□ 1.88
LIME1-206ENST00000487026 STK25O00506 426 aa26.81■■□□□ 1.88
LIME1-206ENST00000487026 AOC1P19801 751 aa26.81■■□□□ 1.88
LIME1-206ENST00000487026 HOXA9P31269 272 aa26.81■■□□□ 1.88
LIME1-206ENST00000487026 RPL9P32969 192 aaKnown RBP26.81■■□□□ 1.88
LIME1-206ENST00000487026 ARPP19P56211 112 aa26.81■■□□□ 1.88
LIME1-206ENST00000487026 MCL1Q07820 350 aa26.81■■□□□ 1.88
LIME1-206ENST00000487026 MCM6Q14566 821 aa26.81■■□□□ 1.88
LIME1-206ENST00000487026 KARSQ15046 597 aaKnown RBP26.81■■□□□ 1.88
LIME1-206ENST00000487026 BRAPQ7Z569 592 aa26.81■■□□□ 1.88
LIME1-206ENST00000487026 IRF2BPLQ9H1B7 796 aa26.81■■□□□ 1.88
LIME1-206ENST00000487026 DNMT3BQ9UBC3 853 aaKnown RBP26.81■■□□□ 1.88
LIME1-206ENST00000487026 WNT16Q9UBV4 365 aa26.81■■□□□ 1.88
LIME1-206ENST00000487026 CDH7Q9ULB5 785 aa26.81■■□□□ 1.88
LIME1-206ENST00000487026 USP34Q70CQ2 3546 aa26.81■■□□□ 1.88
LIME1-206ENST00000487026 CITO14578 2027 aa26.8■■□□□ 1.88
LIME1-206ENST00000487026 VPS37CA5D8V6 355 aaPredicted RBP26.8■■□□□ 1.88
LIME1-206ENST00000487026 CXCL8P10145 99 aa26.8■■□□□ 1.88
LIME1-206ENST00000487026 SRFP11831 508 aa26.8■■□□□ 1.88
LIME1-206ENST00000487026 PLCG1P19174 1290 aa26.8■■□□□ 1.88
LIME1-206ENST00000487026 ROR1Q01973 937 aa26.8■■□□□ 1.88
LIME1-206ENST00000487026 PARM1Q6UWI2 310 aa26.8■■□□□ 1.88
LIME1-206ENST00000487026 MYCT1Q8N699 235 aa26.8■■□□□ 1.88
LIME1-206ENST00000487026 GPR152Q8TDT2 470 aa26.8■■□□□ 1.88
LIME1-206ENST00000487026 FGF13Q92913 245 aa26.8■■□□□ 1.88
LIME1-206ENST00000487026 FGF14Q92915 247 aa26.8■■□□□ 1.88
LIME1-206ENST00000487026 TUBGCP4Q9UGJ1 667 aa26.8■■□□□ 1.88
LIME1-206ENST00000487026 ZFHX2Q9C0A1 2572 aaPredicted RBP26.79■■□□□ 1.88
LIME1-206ENST00000487026 SLC26A4O43511 780 aa26.79■■□□□ 1.88
LIME1-206ENST00000487026 LONP1P36776 959 aaKnown RBP26.79■■□□□ 1.88
LIME1-206ENST00000487026 RASSF8Q8NHQ8 419 aa26.79■■□□□ 1.88
LIME1-206ENST00000487026 ODF2LQ9ULJ1 636 aa26.79■■□□□ 1.88
LIME1-206ENST00000487026 ZFP37Q9Y6Q3 630 aaPredicted RBP26.79■■□□□ 1.88
LIME1-206ENST00000487026 WDR27A2RRH5 827 aa26.78■■□□□ 1.88
LIME1-206ENST00000487026 FAM13AO94988 1023 aa26.78■■□□□ 1.88
LIME1-206ENST00000487026 TNFSF9P41273 254 aa26.78■■□□□ 1.88
LIME1-206ENST00000487026 CUL4AQ13619 759 aa26.78■■□□□ 1.88
LIME1-206ENST00000487026 PABPC1LQ4VXU2 614 aaKnown RBP26.78■■□□□ 1.88
LIME1-206ENST00000487026 SLC8B1Q6J4K2 584 aa26.78■■□□□ 1.88
LIME1-206ENST00000487026 ZNF461Q8TAF7 563 aa26.78■■□□□ 1.88
LIME1-206ENST00000487026 RAD54LQ92698 747 aa26.78■■□□□ 1.88
LIME1-206ENST00000487026 ZHX3Q9H4I2 956 aa26.78■■□□□ 1.88
LIME1-206ENST00000487026 TBX20Q9UMR3 447 aa26.78■■□□□ 1.88
LIME1-206ENST00000487026 H0YCG3 227 aa26.77■■□□□ 1.88
LIME1-206ENST00000487026 SYN3O14994 580 aa26.77■■□□□ 1.88
LIME1-206ENST00000487026 TBC1D4O60343 1298 aa26.77■■□□□ 1.88
LIME1-206ENST00000487026 ABLIM3O94929 683 aa26.77■■□□□ 1.88
LIME1-206ENST00000487026 BMP15O95972 392 aa26.77■■□□□ 1.88
LIME1-206ENST00000487026 KRT18P05783 430 aaKnown RBP26.77■■□□□ 1.88
LIME1-206ENST00000487026 CLTAP09496 248 aa26.77■■□□□ 1.88
LIME1-206ENST00000487026 MCM4P33991 863 aa26.77■■□□□ 1.88
LIME1-206ENST00000487026 LIG4P49917 911 aa26.77■■□□□ 1.88
LIME1-206ENST00000487026 MRPL58Q14197 206 aaKnown RBP26.77■■□□□ 1.88
LIME1-206ENST00000487026 SPECC1Q5M775 1068 aa26.77■■□□□ 1.88
LIME1-206ENST00000487026 ZBTB41Q5SVQ8 909 aa26.77■■□□□ 1.88
LIME1-206ENST00000487026 ING5Q8WYH8 240 aa26.77■■□□□ 1.88
LIME1-206ENST00000487026 SUSD3Q96L08 255 aa26.77■■□□□ 1.88
LIME1-206ENST00000487026 FBXL5Q9UKA1 691 aa26.77■■□□□ 1.88
LIME1-206ENST00000487026 CLIC4Q9Y696 253 aa26.77■■□□□ 1.88
LIME1-206ENST00000487026 MYO15AQ9UKN7 3530 aa26.77■■□□□ 1.88
LIME1-206ENST00000487026 H7C4K7 107 aa26.76■■□□□ 1.87
LIME1-206ENST00000487026 K7ENM7 598 aa26.76■■□□□ 1.87
LIME1-206ENST00000487026 ELF1P32519 619 aa26.76■■□□□ 1.87
LIME1-206ENST00000487026 USP49Q70CQ1 688 aa26.76■■□□□ 1.87
LIME1-206ENST00000487026 KIF12Q96FN5 646 aa26.76■■□□□ 1.87
LIME1-206ENST00000487026 RTP3Q9BQQ7 232 aa26.76■■□□□ 1.87
LIME1-206ENST00000487026 PARVGQ9HBI0 331 aa26.76■■□□□ 1.87
LIME1-206ENST00000487026 NOTCH4Q99466 2003 aa26.75■■□□□ 1.87
LIME1-206ENST00000487026 DMDP11532 3685 aa26.75■■□□□ 1.87
LIME1-206ENST00000487026 TTC26A0AVF1 554 aa26.75■■□□□ 1.87
LIME1-206ENST00000487026 LACTBL1A8MY62 500 aa26.75■■□□□ 1.87
LIME1-206ENST00000487026 PRRG1O14668 218 aa26.75■■□□□ 1.87
LIME1-206ENST00000487026 HNRNPDLO14979 420 aaKnown RBP26.75■■□□□ 1.87
LIME1-206ENST00000487026 TRAK2O60296 914 aa26.75■■□□□ 1.87
LIME1-206ENST00000487026 SEC24AO95486 1093 aa26.75■■□□□ 1.87
LIME1-206ENST00000487026 POU2F2P09086 479 aa26.75■■□□□ 1.87
LIME1-206ENST00000487026 RFX1P22670 979 aa26.75■■□□□ 1.87
LIME1-206ENST00000487026 ZNF131P52739 623 aa26.75■■□□□ 1.87
LIME1-206ENST00000487026 GPC5P78333 572 aa26.75■■□□□ 1.87
LIME1-206ENST00000487026 CTXN3Q4LDR2 81 aa26.75■■□□□ 1.87
LIME1-206ENST00000487026 DDX12PQ92771 950 aa26.75■■□□□ 1.87
LIME1-206ENST00000487026 EPSTI1Q96J88 318 aa26.75■■□□□ 1.87
LIME1-206ENST00000487026 TBC1D17Q9HA65 648 aa26.75■■□□□ 1.87
LIME1-206ENST00000487026 PLEKHA5Q9HAU0 1116 aa26.75■■□□□ 1.87
LIME1-206ENST00000487026 CYP4F11Q9HBI6 524 aa26.75■■□□□ 1.87
LIME1-206ENST00000487026 MRPS23Q9Y3D9 190 aaKnown RBP26.75■■□□□ 1.87
LIME1-206ENST00000487026 MARCKSP29966 332 aaPredicted RBP26.74■■□□□ 1.87
LIME1-206ENST00000487026 NMT1P30419 496 aaKnown RBP26.74■■□□□ 1.87
LIME1-206ENST00000487026 GUCY2FP51841 1108 aa26.74■■□□□ 1.87
LIME1-206ENST00000487026 SLC5A9Q2M3M2 681 aa26.74■■□□□ 1.87
LIME1-206ENST00000487026 FAM173BQ6P4H8 233 aa26.74■■□□□ 1.87
LIME1-206ENST00000487026 RTL10Q7L3V2 364 aa26.74■■□□□ 1.87
LIME1-206ENST00000487026 NPAS3Q8IXF0 933 aa26.74■■□□□ 1.87
LIME1-206ENST00000487026 CCDC105Q8IYK2 499 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms