RNA–Protein interactions for RNA: ENST00000486335.1

CCDC142-208, Transcript of coiled-coil domain containing 142, humanhuman

TSL 5

Gene CCDC142, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-208ENST00000486335 CEP57Q86XR8 500 aa10.17□□□□□ -0.78
CCDC142-208ENST00000486335 C4orf19Q8IY42 314 aa10.17□□□□□ -0.78
CCDC142-208ENST00000486335 FAM160A2Q8N612 972 aaPredicted RBP10.17□□□□□ -0.78
CCDC142-208ENST00000486335 DNASE1L2Q92874 299 aa10.17□□□□□ -0.78
CCDC142-208ENST00000486335 JPH2Q9BR39 696 aaPredicted RBP10.17□□□□□ -0.78
CCDC142-208ENST00000486335 KCNMB3Q9NPA1 279 aa10.17□□□□□ -0.78
CCDC142-208ENST00000486335 TRPV5Q9NQA5 729 aa10.17□□□□□ -0.78
CCDC142-208ENST00000486335 RBM12Q9NTZ6 932 aaKnown RBP10.17□□□□□ -0.78
CCDC142-208ENST00000486335 LMBRD1Q9NUN5 540 aa10.17□□□□□ -0.78
CCDC142-208ENST00000486335 MTRRQ9UBK8 725 aa10.17□□□□□ -0.78
CCDC142-208ENST00000486335 RCOR1Q9UKL0 485 aa10.17□□□□□ -0.78
CCDC142-208ENST00000486335 CFAP45Q9UL16 551 aa10.17□□□□□ -0.78
CCDC142-208ENST00000486335 SF3B1O75533 1304 aaKnown RBP eCLIP10.16□□□□□ -0.78
CCDC142-208ENST00000486335 TDRD15B5MCY1 1934 aaKnown RBP10.16□□□□□ -0.78
CCDC142-208ENST00000486335 ARHGEF37A1IGU5 675 aa10.16□□□□□ -0.78
CCDC142-208ENST00000486335 BTBD18B2RXH4 712 aa10.16□□□□□ -0.78
CCDC142-208ENST00000486335 ASAP2O43150 1006 aa10.16□□□□□ -0.78
CCDC142-208ENST00000486335 XYLBO75191 536 aa10.16□□□□□ -0.78
CCDC142-208ENST00000486335 PAPSS2O95340 614 aaPredicted RBP10.16□□□□□ -0.78
CCDC142-208ENST00000486335 NPTXRO95502 500 aa10.16□□□□□ -0.78
CCDC142-208ENST00000486335 TOP3BO95985 862 aaKnown RBP10.16□□□□□ -0.78
CCDC142-208ENST00000486335 EDN1P05305 212 aa10.16□□□□□ -0.78
CCDC142-208ENST00000486335 P4HBP07237 508 aaKnown RBP10.16□□□□□ -0.78
CCDC142-208ENST00000486335 GLRA2P23416 452 aa10.16□□□□□ -0.78
CCDC142-208ENST00000486335 RFC5P40937 340 aa10.16□□□□□ -0.78
CCDC142-208ENST00000486335 VIPR2P41587 438 aa10.16□□□□□ -0.78
CCDC142-208ENST00000486335 CXCL12P48061 93 aa10.16□□□□□ -0.78
CCDC142-208ENST00000486335 KRT85P78386 507 aa10.16□□□□□ -0.78
CCDC142-208ENST00000486335 CREMQ03060 361 aa10.16□□□□□ -0.78
CCDC142-208ENST00000486335 DNM1Q05193 864 aaKnown RBP10.16□□□□□ -0.78
CCDC142-208ENST00000486335 PTGDRQ13258 359 aa10.16□□□□□ -0.78
CCDC142-208ENST00000486335 CAPSQ13938 189 aa10.16□□□□□ -0.78
CCDC142-208ENST00000486335 LIN9Q5TKA1 542 aa10.16□□□□□ -0.78
CCDC142-208ENST00000486335 MCTP1Q6DN14 999 aa10.16□□□□□ -0.78
CCDC142-208ENST00000486335 Q6ZS52 159 aa10.16□□□□□ -0.78
CCDC142-208ENST00000486335 NOSTRINQ8IVI9 506 aa10.16□□□□□ -0.78
CCDC142-208ENST00000486335 DIS3L2Q8IYB7 885 aaKnown RBP10.16□□□□□ -0.78
CCDC142-208ENST00000486335 KDF1Q8NAX2 398 aaPredicted RBP10.16□□□□□ -0.78
CCDC142-208ENST00000486335 DAGLBQ8NCG7 672 aa10.16□□□□□ -0.78
CCDC142-208ENST00000486335 C3orf58Q8NDZ4 430 aa10.16□□□□□ -0.78
CCDC142-208ENST00000486335 CCDC12Q8WUD4 166 aaPredicted RBP10.16□□□□□ -0.78
CCDC142-208ENST00000486335 SLC7A3Q8WY07 619 aa10.16□□□□□ -0.78
CCDC142-208ENST00000486335 FAM3CQ92520 227 aa10.16□□□□□ -0.78
CCDC142-208ENST00000486335 TNFRSF25Q93038 417 aa10.16□□□□□ -0.78
CCDC142-208ENST00000486335 ZNF396Q96N95 335 aaPredicted RBP10.16□□□□□ -0.78
CCDC142-208ENST00000486335 ASB16Q96NS5 453 aa10.16□□□□□ -0.78
CCDC142-208ENST00000486335 LRRC3BQ96PB8 259 aa10.16□□□□□ -0.78
CCDC142-208ENST00000486335 SCAND2PQ9GZW5 306 aaPredicted RBP10.16□□□□□ -0.78
CCDC142-208ENST00000486335 ZMIZ1Q9ULJ6 1067 aa10.16□□□□□ -0.78
CCDC142-208ENST00000486335 KCNJ14Q9UNX9 436 aa10.16□□□□□ -0.78
CCDC142-208ENST00000486335 USP20Q9Y2K6 914 aa10.16□□□□□ -0.78
CCDC142-208ENST00000486335 MRPS17Q9Y2R5 130 aaKnown RBP10.16□□□□□ -0.78
CCDC142-208ENST00000486335 MRPS23Q9Y3D9 190 aaKnown RBP10.16□□□□□ -0.78
CCDC142-208ENST00000486335 LAMA1P25391 3075 aa10.16□□□□□ -0.78
CCDC142-208ENST00000486335 DMXL2Q8TDJ6 3036 aa10.16□□□□□ -0.78
CCDC142-208ENST00000486335 RALGAPA1Q6GYQ0 2036 aa10.16□□□□□ -0.78
CCDC142-208ENST00000486335 SMG1Q96Q15 3661 aaKnown RBP10.15□□□□□ -0.78
CCDC142-208ENST00000486335 A0A087WWV3 80 aa10.15□□□□□ -0.78
CCDC142-208ENST00000486335 INO80B-WBP1J3KQ70 363 aa10.15□□□□□ -0.78
CCDC142-208ENST00000486335 MAN2B1O00754 1011 aa10.15□□□□□ -0.78
CCDC142-208ENST00000486335 GIPC1O14908 333 aa10.15□□□□□ -0.78
CCDC142-208ENST00000486335 NR1I2O75469 434 aa10.15□□□□□ -0.78
CCDC142-208ENST00000486335 ERLIN2O94905 339 aa10.15□□□□□ -0.78
CCDC142-208ENST00000486335 ABLIM3O94929 683 aa10.15□□□□□ -0.78
CCDC142-208ENST00000486335 SLITRK3O94933 977 aa10.15□□□□□ -0.78
CCDC142-208ENST00000486335 KCNK5O95279 499 aa10.15□□□□□ -0.78
CCDC142-208ENST00000486335 SEC24AO95486 1093 aa10.15□□□□□ -0.78
CCDC142-208ENST00000486335 YWHABP31946 246 aaKnown RBP10.15□□□□□ -0.78
CCDC142-208ENST00000486335 RAP1GAPP47736 663 aa10.15□□□□□ -0.78
CCDC142-208ENST00000486335 CCR3P51677 355 aa10.15□□□□□ -0.78
CCDC142-208ENST00000486335 FOSBP53539 338 aa10.15□□□□□ -0.78
CCDC142-208ENST00000486335 NLRP5P59047 1200 aa10.15□□□□□ -0.78
CCDC142-208ENST00000486335 PCBP1Q15365 356 aaKnown RBP eCLIP10.15□□□□□ -0.78
CCDC142-208ENST00000486335 SKOR2Q2VWA4 1001 aaPredicted RBP10.15□□□□□ -0.78
CCDC142-208ENST00000486335 PLA2G2CQ5R387 149 aa10.15□□□□□ -0.78
CCDC142-208ENST00000486335 FAM173BQ6P4H8 233 aa10.15□□□□□ -0.78
CCDC142-208ENST00000486335 TXNDC11Q6PKC3 985 aa10.15□□□□□ -0.78
CCDC142-208ENST00000486335 MOXD1Q6UVY6 613 aa10.15□□□□□ -0.78
CCDC142-208ENST00000486335 SPEM1Q8N4L4 309 aa10.15□□□□□ -0.78
CCDC142-208ENST00000486335 CCDC148Q8NFR7 591 aa10.15□□□□□ -0.78
CCDC142-208ENST00000486335 LSM14BQ9BX40 385 aaKnown RBP10.15□□□□□ -0.78
CCDC142-208ENST00000486335 NFKBIZQ9BYH8 718 aa10.15□□□□□ -0.78
CCDC142-208ENST00000486335 SMOC1Q9H4F8 434 aa10.15□□□□□ -0.78
CCDC142-208ENST00000486335 PARP2Q9UGN5 583 aa10.15□□□□□ -0.78
CCDC142-208ENST00000486335 PCDHA4Q9UN74 947 aa10.15□□□□□ -0.78
CCDC142-208ENST00000486335 CDY1Q9Y6F8 540 aa10.15□□□□□ -0.78
CCDC142-208ENST00000486335 LAMA5O15230 3695 aa10.14□□□□□ -0.79
CCDC142-208ENST00000486335 ZMYM2Q9UBW7 1377 aa10.14□□□□□ -0.79
CCDC142-208ENST00000486335 AKAP13Q12802 2813 aa10.14□□□□□ -0.79
CCDC142-208ENST00000486335 WDR27A2RRH5 827 aa10.14□□□□□ -0.79
CCDC142-208ENST00000486335 AXIN1O15169 862 aa10.14□□□□□ -0.79
CCDC142-208ENST00000486335 PRPF40AO75400 957 aaKnown RBP10.14□□□□□ -0.79
CCDC142-208ENST00000486335 ZNF806P0C7X5 589 aa10.14□□□□□ -0.79
CCDC142-208ENST00000486335 CCNE1P24864 410 aa10.14□□□□□ -0.79
CCDC142-208ENST00000486335 TKTP29401 623 aaKnown RBP10.14□□□□□ -0.79
CCDC142-208ENST00000486335 HOXA6P31267 233 aa10.14□□□□□ -0.79
CCDC142-208ENST00000486335 KRT2P35908 639 aa10.14□□□□□ -0.79
CCDC142-208ENST00000486335 SOX9P48436 509 aa10.14□□□□□ -0.79
CCDC142-208ENST00000486335 CTTNQ14247 550 aaKnown RBP10.14□□□□□ -0.79
CCDC142-208ENST00000486335 EPHA7Q15375 998 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms