RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 CACNG4Q9UBN1 327 aa9.25□□□□□ -0.93
XRN1-212ENST00000486211 ASCC3Q8N3C0 2202 aaKnown RBP9.24□□□□□ -0.93
XRN1-212ENST00000486211 CACNA1EQ15878 2313 aa9.24□□□□□ -0.93
XRN1-212ENST00000486211 WDR27A2RRH5 827 aa9.24□□□□□ -0.93
XRN1-212ENST00000486211 TMEM150BA6NC51 233 aa9.24□□□□□ -0.93
XRN1-212ENST00000486211 DDAH1O94760 285 aa9.24□□□□□ -0.93
XRN1-212ENST00000486211 STBD1O95210 358 aa9.24□□□□□ -0.93
XRN1-212ENST00000486211 FOSP01100 380 aaPredicted RBP9.24□□□□□ -0.93
XRN1-212ENST00000486211 ITGA4P13612 1032 aa9.24□□□□□ -0.93
XRN1-212ENST00000486211 WNT7BP56706 349 aa9.24□□□□□ -0.93
XRN1-212ENST00000486211 ANTXR2P58335 489 aa9.24□□□□□ -0.93
XRN1-212ENST00000486211 CREB5Q02930 508 aa9.24□□□□□ -0.93
XRN1-212ENST00000486211 C19orf57Q0VDD7 668 aa9.24□□□□□ -0.93
XRN1-212ENST00000486211 RAB33AQ14088 237 aa9.24□□□□□ -0.93
XRN1-212ENST00000486211 LARP1BQ659C4 914 aaKnown RBP9.24□□□□□ -0.93
XRN1-212ENST00000486211 CWC27Q6UX04 472 aaKnown RBP9.24□□□□□ -0.93
XRN1-212ENST00000486211 RTL10Q7L3V2 364 aa9.24□□□□□ -0.93
XRN1-212ENST00000486211 RHPN2Q8IUC4 686 aa9.24□□□□□ -0.93
XRN1-212ENST00000486211 ZNF654Q8IZM8 581 aa9.24□□□□□ -0.93
XRN1-212ENST00000486211 CTCFLQ8NI51 663 aaPredicted RBP9.24□□□□□ -0.93
XRN1-212ENST00000486211 DEPDC1BQ8WUY9 529 aa9.24□□□□□ -0.93
XRN1-212ENST00000486211 HNRNPLLQ8WVV9 542 aaKnown RBP9.24□□□□□ -0.93
XRN1-212ENST00000486211 HPS1Q92902 700 aa9.24□□□□□ -0.93
XRN1-212ENST00000486211 NLRP4Q96MN2 994 aa9.24□□□□□ -0.93
XRN1-212ENST00000486211 ZNF577Q9BSK1 485 aa9.24□□□□□ -0.93
XRN1-212ENST00000486211 TTPALQ9BTX7 342 aa9.24□□□□□ -0.93
XRN1-212ENST00000486211 MINDY3Q9H8M7 445 aa9.24□□□□□ -0.93
XRN1-212ENST00000486211 RIC8AQ9NPQ8 531 aa9.24□□□□□ -0.93
XRN1-212ENST00000486211 SUCLA2Q9P2R7 463 aaPredicted RBP9.24□□□□□ -0.93
XRN1-212ENST00000486211 IPPQ9Y573 584 aa9.24□□□□□ -0.93
XRN1-212ENST00000486211 SF3B1O75533 1304 aaKnown RBP eCLIP9.24□□□□□ -0.93
XRN1-212ENST00000486211 PCNX2A6NKB5 2137 aa9.23□□□□□ -0.93
XRN1-212ENST00000486211 VWA8A3KMH1 1905 aa9.23□□□□□ -0.93
XRN1-212ENST00000486211 SPAARA0A1B0GVQ0 90 aa9.23□□□□□ -0.93
XRN1-212ENST00000486211 ERICH2A1L162 156 aa9.23□□□□□ -0.93
XRN1-212ENST00000486211 MYBPHLA2RUH7 354 aa9.23□□□□□ -0.93
XRN1-212ENST00000486211 SLC38A8A6NNN8 435 aa9.23□□□□□ -0.93
XRN1-212ENST00000486211 ZNF263O14978 683 aa9.23□□□□□ -0.93
XRN1-212ENST00000486211 MICAL2O94851 1124 aa9.23□□□□□ -0.93
XRN1-212ENST00000486211 CTHP32929 405 aa9.23□□□□□ -0.93
XRN1-212ENST00000486211 ZNF76P36508 570 aa9.23□□□□□ -0.93
XRN1-212ENST00000486211 VIPR2P41587 438 aa9.23□□□□□ -0.93
XRN1-212ENST00000486211 CCR2P41597 374 aa9.23□□□□□ -0.93
XRN1-212ENST00000486211 CLK2P49760 499 aaKnown RBP9.23□□□□□ -0.93
XRN1-212ENST00000486211 WWC2Q6AWC2 1192 aa9.23□□□□□ -0.93
XRN1-212ENST00000486211 C1orf228Q6PIY5 440 aa9.23□□□□□ -0.93
XRN1-212ENST00000486211 HEATR3Q7Z4Q2 680 aa9.23□□□□□ -0.93
XRN1-212ENST00000486211 RAB44Q7Z6P3 723 aaPredicted RBP9.23□□□□□ -0.93
XRN1-212ENST00000486211 PIP4P1Q86T03 277 aa9.23□□□□□ -0.93
XRN1-212ENST00000486211 TEX2Q8IWB9 1127 aa9.23□□□□□ -0.93
XRN1-212ENST00000486211 MFSD6LQ8IWD5 586 aa9.23□□□□□ -0.93
XRN1-212ENST00000486211 SYNPOQ8N3V7 929 aa9.23□□□□□ -0.93
XRN1-212ENST00000486211 CHCHD4Q8N4Q1 142 aa9.23□□□□□ -0.93
XRN1-212ENST00000486211 CNNM3Q8NE01 707 aa9.23□□□□□ -0.93
XRN1-212ENST00000486211 SPIRE2Q8WWL2 714 aa9.23□□□□□ -0.93
XRN1-212ENST00000486211 SMARCD2Q92925 531 aa9.23□□□□□ -0.93
XRN1-212ENST00000486211 RSPRY1Q96DX4 576 aa9.23□□□□□ -0.93
XRN1-212ENST00000486211 LRIG1Q96JA1 1093 aa9.23□□□□□ -0.93
XRN1-212ENST00000486211 PAAF1Q9BRP4 392 aa9.23□□□□□ -0.93
XRN1-212ENST00000486211 EIF2AQ9BY44 585 aaKnown RBP9.23□□□□□ -0.93
XRN1-212ENST00000486211 NIFKQ9BYG3 293 aaKnown RBP9.23□□□□□ -0.93
XRN1-212ENST00000486211 IL25Q9H293 177 aa9.23□□□□□ -0.93
XRN1-212ENST00000486211 C8orf33Q9H7E9 229 aaPredicted RBP9.23□□□□□ -0.93
XRN1-212ENST00000486211 TRPV4Q9HBA0 871 aa9.23□□□□□ -0.93
XRN1-212ENST00000486211 HES2Q9Y543 173 aa9.23□□□□□ -0.93
XRN1-212ENST00000486211 TAF6LQ9Y6J9 622 aa9.23□□□□□ -0.93
XRN1-212ENST00000486211 ARHGEF37A1IGU5 675 aa9.22□□□□□ -0.93
XRN1-212ENST00000486211 WDR64B1ANS9 1081 aa9.22□□□□□ -0.93
XRN1-212ENST00000486211 PATE3B3GLJ2 98 aa9.22□□□□□ -0.93
XRN1-212ENST00000486211 SPECC1L-ADORA2AF8WAN1 911 aa9.22□□□□□ -0.93
XRN1-212ENST00000486211 CCER2I3L3R5 266 aa9.22□□□□□ -0.93
XRN1-212ENST00000486211 DCLK1O15075 740 aa9.22□□□□□ -0.93
XRN1-212ENST00000486211 MOSPD3O75425 235 aa9.22□□□□□ -0.93
XRN1-212ENST00000486211 TADA2AO75478 443 aa9.22□□□□□ -0.93
XRN1-212ENST00000486211 CYP3A4P08684 503 aa9.22□□□□□ -0.93
XRN1-212ENST00000486211 SNRPBP14678 240 aaKnown RBP9.22□□□□□ -0.93
XRN1-212ENST00000486211 JUNDP17535 347 aa9.22□□□□□ -0.93
XRN1-212ENST00000486211 OR1D2P34982 312 aa9.22□□□□□ -0.93
XRN1-212ENST00000486211 GNAQP50148 359 aa9.22□□□□□ -0.93
XRN1-212ENST00000486211 SIM1P81133 766 aaPredicted RBP9.22□□□□□ -0.93
XRN1-212ENST00000486211 SKOR1P84550 965 aa9.22□□□□□ -0.93
XRN1-212ENST00000486211 TRDNQ13061 729 aa9.22□□□□□ -0.93
XRN1-212ENST00000486211 AP3B2Q13367 1082 aa9.22□□□□□ -0.93
XRN1-212ENST00000486211 HSP90AA2PQ14568 343 aaPredicted RBP9.22□□□□□ -0.93
XRN1-212ENST00000486211 MTERF2Q49AM1 385 aa9.22□□□□□ -0.93
XRN1-212ENST00000486211 FAM171A1Q5VUB5 890 aa9.22□□□□□ -0.93
XRN1-212ENST00000486211 HASPINQ8TF76 798 aa9.22□□□□□ -0.93
XRN1-212ENST00000486211 RILPL2Q969X0 211 aa9.22□□□□□ -0.93
XRN1-212ENST00000486211 SH2D3AQ9BRG2 576 aa9.22□□□□□ -0.93
XRN1-212ENST00000486211 MKNK1Q9BUB5 465 aa9.22□□□□□ -0.93
XRN1-212ENST00000486211 DISC1Q9NRI5 854 aa9.22□□□□□ -0.93
XRN1-212ENST00000486211 SAMM50Q9Y512 469 aa9.22□□□□□ -0.93
XRN1-212ENST00000486211 APC2O95996 2303 aa9.22□□□□□ -0.93
XRN1-212ENST00000486211 NUP205Q92621 2012 aa9.22□□□□□ -0.93
XRN1-212ENST00000486211 ASXL3Q9C0F0 2248 aa9.21□□□□□ -0.93
XRN1-212ENST00000486211 HEPACAM2A8MVW5 462 aa9.21□□□□□ -0.94
XRN1-212ENST00000486211 H0Y626 953 aa9.21□□□□□ -0.94
XRN1-212ENST00000486211 KHNYNO15037 678 aaKnown RBP9.21□□□□□ -0.94
XRN1-212ENST00000486211 MEFVO15553 781 aaPredicted RBP9.21□□□□□ -0.94
XRN1-212ENST00000486211 MAFO75444 373 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms