RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 GIT1Q9Y2X7 761 aa10.29□□□□□ -0.76
TMEM39A-208ENST00000486159 CFAP54Q96N23 3096 aa10.29□□□□□ -0.76
TMEM39A-208ENST00000486159 MTCL1Q9Y4B5 1905 aaKnown RBP10.29□□□□□ -0.76
TMEM39A-208ENST00000486159 TRIP11Q15643 1979 aa10.28□□□□□ -0.76
TMEM39A-208ENST00000486159 KIF4AO95239 1232 aa10.28□□□□□ -0.76
TMEM39A-208ENST00000486159 PTMAP06454 111 aaKnown RBP10.28□□□□□ -0.76
TMEM39A-208ENST00000486159 CDC25AP30304 524 aa10.28□□□□□ -0.76
TMEM39A-208ENST00000486159 GRIN1Q05586 938 aa10.28□□□□□ -0.76
TMEM39A-208ENST00000486159 PDIA5Q14554 519 aa10.28□□□□□ -0.76
TMEM39A-208ENST00000486159 NAB2Q15742 525 aa10.28□□□□□ -0.76
TMEM39A-208ENST00000486159 GLRA4Q5JXX5 417 aa10.28□□□□□ -0.76
TMEM39A-208ENST00000486159 CDCA2Q69YH5 1023 aaPredicted RBP10.28□□□□□ -0.76
TMEM39A-208ENST00000486159 LILRA6Q6PI73 481 aa10.28□□□□□ -0.76
TMEM39A-208ENST00000486159 CD300LGQ6UXG3 332 aa10.28□□□□□ -0.76
TMEM39A-208ENST00000486159 MAMSTRQ6ZN01 415 aa10.28□□□□□ -0.76
TMEM39A-208ENST00000486159 CCDC149Q6ZUS6 474 aa10.28□□□□□ -0.76
TMEM39A-208ENST00000486159 UBALD2Q8IYN6 164 aa10.28□□□□□ -0.76
TMEM39A-208ENST00000486159 FLCNQ8NFG4 579 aa10.28□□□□□ -0.76
TMEM39A-208ENST00000486159 CCDC51Q96ER9 411 aa10.28□□□□□ -0.76
TMEM39A-208ENST00000486159 MRFAP1L1Q96HT8 127 aa10.28□□□□□ -0.76
TMEM39A-208ENST00000486159 CCDC43Q96MW1 224 aaKnown RBP10.28□□□□□ -0.76
TMEM39A-208ENST00000486159 COLEC11Q9BWP8 271 aa10.28□□□□□ -0.76
TMEM39A-208ENST00000486159 NFKBIZQ9BYH8 718 aa10.28□□□□□ -0.76
TMEM39A-208ENST00000486159 CCDC113Q9H0I3 377 aa10.28□□□□□ -0.76
TMEM39A-208ENST00000486159 UBN1Q9NPG3 1134 aa10.28□□□□□ -0.76
TMEM39A-208ENST00000486159 ADAM28Q9UKQ2 775 aa10.28□□□□□ -0.76
TMEM39A-208ENST00000486159 USTQ9Y2C2 406 aa10.28□□□□□ -0.76
TMEM39A-208ENST00000486159 GDAQ9Y2T3 454 aa10.28□□□□□ -0.76
TMEM39A-208ENST00000486159 PCDHA5Q9Y5H7 936 aa10.28□□□□□ -0.76
TMEM39A-208ENST00000486159 VWA8A3KMH1 1905 aa10.28□□□□□ -0.76
TMEM39A-208ENST00000486159 UNC79Q9P2D8 2635 aa10.28□□□□□ -0.76
TMEM39A-208ENST00000486159 MYO15AQ9UKN7 3530 aa10.28□□□□□ -0.76
TMEM39A-208ENST00000486159 DOCK8Q8NF50 2099 aa10.27□□□□□ -0.76
TMEM39A-208ENST00000486159 KRBA1A5PL33 1030 aa10.27□□□□□ -0.77
TMEM39A-208ENST00000486159 ESPNB1AK53 854 aa10.27□□□□□ -0.77
TMEM39A-208ENST00000486159 I3L4J1 428 aa10.27□□□□□ -0.77
TMEM39A-208ENST00000486159 TADA2AO75478 443 aa10.27□□□□□ -0.77
TMEM39A-208ENST00000486159 RECQL4O94761 1208 aa10.27□□□□□ -0.77
TMEM39A-208ENST00000486159 GLUD1P00367 558 aa10.27□□□□□ -0.77
TMEM39A-208ENST00000486159 PRKCBP05771 671 aa10.27□□□□□ -0.77
TMEM39A-208ENST00000486159 CFHP08603 1231 aa10.27□□□□□ -0.77
TMEM39A-208ENST00000486159 CYP11B2P19099 503 aa10.27□□□□□ -0.77
TMEM39A-208ENST00000486159 ERCC5P28715 1186 aaPredicted RBP10.27□□□□□ -0.77
TMEM39A-208ENST00000486159 GBP2P32456 591 aaPredicted RBP10.27□□□□□ -0.77
TMEM39A-208ENST00000486159 UBA7P41226 1012 aa10.27□□□□□ -0.77
TMEM39A-208ENST00000486159 GRIK3Q13003 919 aa10.27□□□□□ -0.77
TMEM39A-208ENST00000486159 PNOCQ13519 176 aa10.27□□□□□ -0.77
TMEM39A-208ENST00000486159 TDGQ13569 410 aa10.27□□□□□ -0.77
TMEM39A-208ENST00000486159 MORC3Q14149 939 aa10.27□□□□□ -0.77
TMEM39A-208ENST00000486159 HSP90AA2PQ14568 343 aaPredicted RBP10.27□□□□□ -0.77
TMEM39A-208ENST00000486159 E2F4Q16254 413 aa10.27□□□□□ -0.77
TMEM39A-208ENST00000486159 RSPO2Q6UXX9 243 aaPredicted RBP10.27□□□□□ -0.77
TMEM39A-208ENST00000486159 C11orf57Q6ZUT1 292 aaPredicted RBP10.27□□□□□ -0.77
TMEM39A-208ENST00000486159 ASCL5Q7RTU5 278 aa10.27□□□□□ -0.77
TMEM39A-208ENST00000486159 CEP57Q86XR8 500 aa10.27□□□□□ -0.77
TMEM39A-208ENST00000486159 DHX40Q8IX18 779 aaKnown RBP10.27□□□□□ -0.77
TMEM39A-208ENST00000486159 CEP120Q8N960 986 aa10.27□□□□□ -0.77
TMEM39A-208ENST00000486159 LNX1Q8TBB1 728 aaPredicted RBP10.27□□□□□ -0.77
TMEM39A-208ENST00000486159 RSPH1Q8WYR4 309 aa10.27□□□□□ -0.77
TMEM39A-208ENST00000486159 SMG7Q92540 1137 aaKnown RBP10.27□□□□□ -0.77
TMEM39A-208ENST00000486159 DHX58Q96C10 678 aa10.27□□□□□ -0.77
TMEM39A-208ENST00000486159 EPSTI1Q96J88 318 aa10.27□□□□□ -0.77
TMEM39A-208ENST00000486159 CLSTN3Q9BQT9 956 aa10.27□□□□□ -0.77
TMEM39A-208ENST00000486159 POLR3CQ9BUI4 534 aaPredicted RBP10.27□□□□□ -0.77
TMEM39A-208ENST00000486159 NT5C3AQ9H0P0 336 aa10.27□□□□□ -0.77
TMEM39A-208ENST00000486159 GOLGA2P5Q9HBQ8 144 aa10.27□□□□□ -0.77
TMEM39A-208ENST00000486159 WDR6Q9NNW5 1121 aaKnown RBP10.27□□□□□ -0.77
TMEM39A-208ENST00000486159 TUFT1Q9NNX1 390 aa10.27□□□□□ -0.77
TMEM39A-208ENST00000486159 RMND1Q9NWS8 449 aa10.27□□□□□ -0.77
TMEM39A-208ENST00000486159 ARHGEF35A5YM69 484 aa10.26□□□□□ -0.77
TMEM39A-208ENST00000486159 E9PMD0 336 aa10.26□□□□□ -0.77
TMEM39A-208ENST00000486159 MEFVO15553 781 aaPredicted RBP10.26□□□□□ -0.77
TMEM39A-208ENST00000486159 GFRA3O60609 400 aa10.26□□□□□ -0.77
TMEM39A-208ENST00000486159 ADH1AP07327 375 aa10.26□□□□□ -0.77
TMEM39A-208ENST00000486159 RPA1P27694 616 aa10.26□□□□□ -0.77
TMEM39A-208ENST00000486159 CCT6AP40227 531 aaKnown RBP10.26□□□□□ -0.77
TMEM39A-208ENST00000486159 ZNF75DP51815 510 aa10.26□□□□□ -0.77
TMEM39A-208ENST00000486159 MYL5Q02045 173 aa10.26□□□□□ -0.77
TMEM39A-208ENST00000486159 NCBP1Q09161 790 aaKnown RBP10.26□□□□□ -0.77
TMEM39A-208ENST00000486159 TUSC3Q13454 348 aa10.26□□□□□ -0.77
TMEM39A-208ENST00000486159 PRPF4BQ13523 1007 aaKnown RBP10.26□□□□□ -0.77
TMEM39A-208ENST00000486159 FAM187BQ17R55 369 aa10.26□□□□□ -0.77
TMEM39A-208ENST00000486159 USP41Q3LFD5 358 aa10.26□□□□□ -0.77
TMEM39A-208ENST00000486159 DPCR1Q3MIW9 517 aa10.26□□□□□ -0.77
TMEM39A-208ENST00000486159 SPECC1Q5M775 1068 aa10.26□□□□□ -0.77
TMEM39A-208ENST00000486159 FAM171A1Q5VUB5 890 aa10.26□□□□□ -0.77
TMEM39A-208ENST00000486159 RRAGBQ5VZM2 374 aa10.26□□□□□ -0.77
TMEM39A-208ENST00000486159 C15orf39Q6ZRI6 1047 aa10.26□□□□□ -0.77
TMEM39A-208ENST00000486159 GET4Q7L5D6 327 aaPredicted RBP10.26□□□□□ -0.77
TMEM39A-208ENST00000486159 OTOP3Q7RTS5 596 aa10.26□□□□□ -0.77
TMEM39A-208ENST00000486159 TAS1R3Q7RTX0 852 aa10.26□□□□□ -0.77
TMEM39A-208ENST00000486159 KCNK18Q7Z418 384 aa10.26□□□□□ -0.77
TMEM39A-208ENST00000486159 SIX5Q8N196 739 aa10.26□□□□□ -0.77
TMEM39A-208ENST00000486159 SLC44A3Q8N4M1 653 aa10.26□□□□□ -0.77
TMEM39A-208ENST00000486159 C3orf58Q8NDZ4 430 aa10.26□□□□□ -0.77
TMEM39A-208ENST00000486159 CMASQ8NFW8 434 aaPredicted RBP10.26□□□□□ -0.77
TMEM39A-208ENST00000486159 ACSF2Q96CM8 615 aaPredicted RBP10.26□□□□□ -0.77
TMEM39A-208ENST00000486159 PAGE5Q96GU1 130 aa10.26□□□□□ -0.77
TMEM39A-208ENST00000486159 NACC1Q96RE7 527 aa10.26□□□□□ -0.77
TMEM39A-208ENST00000486159 TRIM5Q9C035 493 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms