RNA–Protein interactions for RNA: ENST00000486066.5

CHRD-216, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-216ENST00000486066 CELF5Q8N6W0 485 aaKnown RBP21.24■□□□□ 0.99
CHRD-216ENST00000486066 NETO1Q8TDF5 533 aa21.24■□□□□ 0.99
CHRD-216ENST00000486066 C2orf40Q9H1Z8 148 aa21.24■□□□□ 0.99
CHRD-216ENST00000486066 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.24■□□□□ 0.99
CHRD-216ENST00000486066 WDFY3Q8IZQ1 3526 aa21.23■□□□□ 0.99
CHRD-216ENST00000486066 PFKFB2O60825 505 aa21.23■□□□□ 0.99
CHRD-216ENST00000486066 PRKCBP05771 671 aa21.23■□□□□ 0.99
CHRD-216ENST00000486066 RETP07949 1114 aa21.23■□□□□ 0.99
CHRD-216ENST00000486066 CHRNB1P11230 501 aa21.23■□□□□ 0.99
CHRD-216ENST00000486066 ATF2P15336 505 aa21.23■□□□□ 0.99
CHRD-216ENST00000486066 XBP1P17861 261 aa21.23■□□□□ 0.99
CHRD-216ENST00000486066 NRLP54845 237 aa21.23■□□□□ 0.99
CHRD-216ENST00000486066 SOX4Q06945 474 aaPredicted RBP21.23■□□□□ 0.99
CHRD-216ENST00000486066 MRPL58Q14197 206 aaKnown RBP21.23■□□□□ 0.99
CHRD-216ENST00000486066 MAPK6Q16659 721 aa21.23■□□□□ 0.99
CHRD-216ENST00000486066 GLRA4Q5JXX5 417 aa21.23■□□□□ 0.99
CHRD-216ENST00000486066 VITQ6UXI7 678 aa21.23■□□□□ 0.99
CHRD-216ENST00000486066 ALKAL1Q6UXT8 129 aa21.23■□□□□ 0.99
CHRD-216ENST00000486066 MAEAQ7L5Y9 396 aa21.23■□□□□ 0.99
CHRD-216ENST00000486066 CATSPER3Q86XQ3 398 aa21.23■□□□□ 0.99
CHRD-216ENST00000486066 UROC1Q96N76 676 aa21.23■□□□□ 0.99
CHRD-216ENST00000486066 TRPV4Q9HBA0 871 aa21.23■□□□□ 0.99
CHRD-216ENST00000486066 GOLGA2P5Q9HBQ8 144 aa21.23■□□□□ 0.99
CHRD-216ENST00000486066 ZNF334Q9HCZ1 680 aaPredicted RBP21.23■□□□□ 0.99
CHRD-216ENST00000486066 SPEGQ15772 3267 aa21.23■□□□□ 0.99
CHRD-216ENST00000486066 GREB1Q4ZG55 1949 aa21.22■□□□□ 0.99
CHRD-216ENST00000486066 I3L4J1 428 aa21.22■□□□□ 0.99
CHRD-216ENST00000486066 PAPSS2O95340 614 aaPredicted RBP21.22■□□□□ 0.99
CHRD-216ENST00000486066 SEC24AO95486 1093 aa21.22■□□□□ 0.99
CHRD-216ENST00000486066 NAMPTP43490 491 aa21.22■□□□□ 0.99
CHRD-216ENST00000486066 BRCC3P46736 316 aa21.22■□□□□ 0.99
CHRD-216ENST00000486066 EPHA5P54756 1037 aa21.22■□□□□ 0.99
CHRD-216ENST00000486066 GRM2Q14416 872 aa21.22■□□□□ 0.99
CHRD-216ENST00000486066 DCAF4L1Q3SXM0 396 aa21.22■□□□□ 0.99
CHRD-216ENST00000486066 WDR44Q5JSH3 913 aa21.22■□□□□ 0.99
CHRD-216ENST00000486066 NT5DC1Q5TFE4 455 aa21.22■□□□□ 0.99
CHRD-216ENST00000486066 ZSWIM3Q96MP5 696 aa21.22■□□□□ 0.99
CHRD-216ENST00000486066 ZFP14Q9HCL3 533 aa21.22■□□□□ 0.99
CHRD-216ENST00000486066 NDRG2Q9UN36 371 aaKnown RBP21.22■□□□□ 0.99
CHRD-216ENST00000486066 GDAQ9Y2T3 454 aa21.22■□□□□ 0.99
CHRD-216ENST00000486066 CITO14578 2027 aa21.22■□□□□ 0.99
CHRD-216ENST00000486066 MED24O75448 989 aa21.21■□□□□ 0.99
CHRD-216ENST00000486066 KRT2P35908 639 aa21.21■□□□□ 0.99
CHRD-216ENST00000486066 CCR3P51677 355 aa21.21■□□□□ 0.99
CHRD-216ENST00000486066 MLLT6P55198 1093 aaPredicted RBP21.21■□□□□ 0.99
CHRD-216ENST00000486066 ST3GAL2Q16842 350 aa21.21■□□□□ 0.99
CHRD-216ENST00000486066 IRF7Q92985 503 aa21.21■□□□□ 0.99
CHRD-216ENST00000486066 CCDC43Q96MW1 224 aaKnown RBP21.21■□□□□ 0.99
CHRD-216ENST00000486066 ADPGKQ9BRR6 497 aa21.21■□□□□ 0.99
CHRD-216ENST00000486066 TRMT61BQ9BVS5 477 aaKnown RBP21.21■□□□□ 0.99
CHRD-216ENST00000486066 TMEM60Q9H2L4 133 aa21.21■□□□□ 0.99
CHRD-216ENST00000486066 BRD9Q9H8M2 597 aa21.21■□□□□ 0.99
CHRD-216ENST00000486066 TUFT1Q9NNX1 390 aa21.21■□□□□ 0.99
CHRD-216ENST00000486066 TPCN1Q9ULQ1 816 aa21.21■□□□□ 0.99
CHRD-216ENST00000486066 SMIM28A0A1B0GU29 152 aa21.2■□□□□ 0.98
CHRD-216ENST00000486066 NEMFO60524 1076 aa21.2■□□□□ 0.98
CHRD-216ENST00000486066 PSMC3P17980 439 aa21.2■□□□□ 0.98
CHRD-216ENST00000486066 CYP11B2P19099 503 aa21.2■□□□□ 0.98
CHRD-216ENST00000486066 ATP2B1P20020 1258 aa21.2■□□□□ 0.98
CHRD-216ENST00000486066 TXKP42681 527 aa21.2■□□□□ 0.98
CHRD-216ENST00000486066 SATB1Q01826 763 aa21.2■□□□□ 0.98
CHRD-216ENST00000486066 LPAL2Q16609 132 aa21.2■□□□□ 0.98
CHRD-216ENST00000486066 PPM1JQ5JR12 505 aa21.2■□□□□ 0.98
CHRD-216ENST00000486066 SMARCD2Q92925 531 aa21.2■□□□□ 0.98
CHRD-216ENST00000486066 CORO1BQ9BR76 489 aa21.2■□□□□ 0.98
CHRD-216ENST00000486066 LMAN1LQ9HAT1 526 aa21.2■□□□□ 0.98
CHRD-216ENST00000486066 SEMA4GQ9NTN9 838 aa21.2■□□□□ 0.98
CHRD-216ENST00000486066 PDRG1Q9NUG6 133 aa21.2■□□□□ 0.98
CHRD-216ENST00000486066 INSL5Q9Y5Q6 135 aa21.2■□□□□ 0.98
CHRD-216ENST00000486066 SPAG17Q6Q759 2223 aa21.19■□□□□ 0.98
CHRD-216ENST00000486066 K7ESF4 209 aa21.19■□□□□ 0.98
CHRD-216ENST00000486066 HRO43593 1189 aa21.19■□□□□ 0.98
CHRD-216ENST00000486066 TRAPPC3O43617 180 aa21.19■□□□□ 0.98
CHRD-216ENST00000486066 LRG1P02750 347 aa21.19■□□□□ 0.98
CHRD-216ENST00000486066 DMWDQ09019 674 aa21.19■□□□□ 0.98
CHRD-216ENST00000486066 CSRP2Q16527 193 aa21.19■□□□□ 0.98
CHRD-216ENST00000486066 DEPDC1BQ8WUY9 529 aa21.19■□□□□ 0.98
CHRD-216ENST00000486066 FAM3CQ92520 227 aa21.19■□□□□ 0.98
CHRD-216ENST00000486066 ZMAT2Q96NC0 199 aaKnown RBP21.19■□□□□ 0.98
CHRD-216ENST00000486066 POLR3CQ9BUI4 534 aaPredicted RBP21.19■□□□□ 0.98
CHRD-216ENST00000486066 PTPRHQ9HD43 1115 aa21.19■□□□□ 0.98
CHRD-216ENST00000486066 ORC3Q9UBD5 711 aaPredicted RBP21.19■□□□□ 0.98
CHRD-216ENST00000486066 PIAS3Q9Y6X2 628 aa21.19■□□□□ 0.98
CHRD-216ENST00000486066 CACNA1GO43497 2377 aa21.18■□□□□ 0.98
CHRD-216ENST00000486066 ZNF197O14709 1029 aa21.18■□□□□ 0.98
CHRD-216ENST00000486066 SYN3O14994 580 aa21.18■□□□□ 0.98
CHRD-216ENST00000486066 MEFVO15553 781 aaPredicted RBP21.18■□□□□ 0.98
CHRD-216ENST00000486066 PTGDRQ13258 359 aa21.18■□□□□ 0.98
CHRD-216ENST00000486066 TPGS2Q68CL5 300 aa21.18■□□□□ 0.98
CHRD-216ENST00000486066 PADI6Q6TGC4 694 aa21.18■□□□□ 0.98
CHRD-216ENST00000486066 PRR23CQ6ZRP0 262 aa21.18■□□□□ 0.98
CHRD-216ENST00000486066 CEP120Q8N960 986 aa21.18■□□□□ 0.98
CHRD-216ENST00000486066 NACC1Q96RE7 527 aa21.18■□□□□ 0.98
CHRD-216ENST00000486066 KIFC3Q9BVG8 833 aa21.18■□□□□ 0.98
CHRD-216ENST00000486066 CEP72Q9P209 647 aa21.18■□□□□ 0.98
CHRD-216ENST00000486066 FBXL5Q9UKA1 691 aa21.18■□□□□ 0.98
CHRD-216ENST00000486066 KIF26AQ9ULI4 1882 aaPredicted RBP21.18■□□□□ 0.98
CHRD-216ENST00000486066 FAM208BQ5VWN6 2430 aa21.17■□□□□ 0.98
CHRD-216ENST00000486066 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.17■□□□□ 0.98
CHRD-216ENST00000486066 BTBD18B2RXH4 712 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms